We performed permutations to estimate the alpha = 0.05 significance threshold of LOD = 7.7698322. Using this threshold, there are QTL peaks, listed in the table below.
| Phenotype | Chr | Pos | LOD | CI low | CI high |
|---|---|---|---|---|---|
| survival | 1 | 154.10289 | 8.283179 | 153.71611 | 156.64735 |
| lung_vegf | 2 | 93.54690 | 7.853143 | 92.14710 | 94.28775 |
| lung_s100a8 | 3 | 90.74194 | 18.557481 | 90.52078 | 91.97561 |
| serum_cxcl5 | 5 | 77.13883 | 9.683969 | 75.91675 | 91.73410 |
| lung_cxcl1 | 15 | 25.75102 | 7.907527 | 19.16443 | 25.83097 |
| necr_ratio | 17 | 37.22030 | 7.921965 | 35.19377 | 41.96493 |
For each QTL peak with a LOD > 7.7, we searched for colocated QTL for other phenotypes with LOD >= 6.0.
| Phenotype | Chr | Pos | LOD | CI low | CI high |
|---|---|---|---|---|---|
| mtb_burden | 1 | 154.5151 | 7.417580 | 154.0780 | 155.5343 |
| lung_cxcl1 | 1 | 154.8180 | 6.905196 | 149.8180 | 159.8180 |
| lung_mmp8 | 1 | 158.2314 | 6.108413 | 153.2314 | 163.2314 |
| survival | 1 | 154.1029 | 8.283179 | 153.7161 | 156.6474 |
The survival QTL on Chr 1 is colocated with three other QTL for lung: Mtb Burden, Cxcl1, and Mmp8.
Below is the associtation mapping plot for Surrvival.
There are 126 unique genes in the QTL interval. We measured expression for 119 of these genes.
Plot a histogram of the correlations.
The correlations are all very high. This makes me wonder whether the genes are changing due to disease or the passing of time. Plot the gene with the highest correlation vs. the phenotype.
We can also select genes based on a T-test between mice euthanized early and those that survived to the end of the study.
Plot a histogram of the adjusted T-test p-values.
There are still a lot of genes with low p-values. Plot the one with the lowest p-value (6.795409810^{-7}).
This looks reasonable.
Produce a list of genes with mean expression and t-test p-values.
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
| entrez | ensembl | symbol | genename | consequence | num_snps | chr | start | end | mean_expr | survival |
|---|---|---|---|---|---|---|---|---|---|---|
| 100503355 | ENSMUSG00000066797 | Zfp648 | zinc finger protein 648 | missense_variant | 10 | chr1 | 154.2012 | 154.2057 | 4.657745 | 0.0422888 |
| 100503355 | ENSMUSG00000066797 | Zfp648 | zinc finger protein 648 | synonymous_variant | 9 | chr1 | 154.2012 | 154.2057 | 4.657745 | 0.0422888 |
| 100503355 | ENSMUSG00000066797 | Zfp648 | zinc finger protein 648 | 5_prime_UTR_variant | 4 | chr1 | 154.2012 | 154.2057 | 4.657745 | 0.0422888 |
| 102466257 | ENSMUSG00000099227 | Mir8114 | microRNA 8114 | downstream_gene_variant | 4 | chr1 | 153.8999 | 153.9000 | NA | NA |
| 102466257 | ENSMUSG00000099227 | Mir8114 | microRNA 8114 | mature_miRNA_variant | 1 | chr1 | 153.8999 | 153.9000 | NA | NA |
| 102466257 | ENSMUSG00000099227 | Mir8114 | microRNA 8114 | mature_miRNA_variant | 1 | chr1 | 153.8999 | 153.9000 | NA | NA |
| 104009 | ENSMUSG00000033684 | Qsox1 | quiescin Q6 sulfhydryl oxidase 1 | intron_variant | 64 | chr1 | 155.7782 | 155.8129 | 7.205347 | 0.0000127 |
| 104009 | ENSMUSG00000033684 | Qsox1 | quiescin Q6 sulfhydryl oxidase 1 | missense_variant | 8 | chr1 | 155.7782 | 155.8129 | 7.205347 | 0.0000127 |
| 104009 | ENSMUSG00000033684 | Qsox1 | quiescin Q6 sulfhydryl oxidase 1 | 3_prime_UTR_variant | 23 | chr1 | 155.7782 | 155.8129 | 7.205347 | 0.0000127 |
| 104009 | ENSMUSG00000033684 | Qsox1 | quiescin Q6 sulfhydryl oxidase 1 | non_coding_transcript_variant | 87 | chr1 | 155.7782 | 155.8129 | 7.205347 | 0.0000127 |
| 104009 | ENSMUSG00000033684 | Qsox1 | quiescin Q6 sulfhydryl oxidase 1 | synonymous_variant | 17 | chr1 | 155.7782 | 155.8129 | 7.205347 | 0.0000127 |
| 104009 | ENSMUSG00000033684 | Qsox1 | quiescin Q6 sulfhydryl oxidase 1 | upstream_gene_variant | 15 | chr1 | 155.7782 | 155.8129 | 7.205347 | 0.0000127 |
| 104009 | ENSMUSG00000033684 | Qsox1 | quiescin Q6 sulfhydryl oxidase 1 | non_coding_transcript_exon_variant | 87 | chr1 | 155.7782 | 155.8129 | 7.205347 | 0.0000127 |
| 104009 | ENSMUSG00000033684 | Qsox1 | quiescin Q6 sulfhydryl oxidase 1 | downstream_gene_variant | 37 | chr1 | 155.7782 | 155.8129 | 7.205347 | 0.0000127 |
| 11352 | ENSMUSG00000026596 | Abl2 | v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene) | missense_variant | 5 | chr1 | 156.5588 | 156.6496 | 5.449245 | 1.0000000 |
| 11352 | ENSMUSG00000026596 | Abl2 | v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene) | 5_prime_UTR_variant | 2 | chr1 | 156.5588 | 156.6496 | 5.449245 | 1.0000000 |
| 11352 | ENSMUSG00000026596 | Abl2 | v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene) | 3_prime_UTR_variant | 66 | chr1 | 156.5588 | 156.6496 | 5.449245 | 1.0000000 |
| 11352 | ENSMUSG00000026596 | Abl2 | v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene) | downstream_gene_variant | 78 | chr1 | 156.5588 | 156.6496 | 5.449245 | 1.0000000 |
| 11352 | ENSMUSG00000026596 | Abl2 | v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene) | upstream_gene_variant | 2 | chr1 | 156.5588 | 156.6496 | 5.449245 | 1.0000000 |
| 11352 | ENSMUSG00000026596 | Abl2 | v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene) | intron_variant | 4 | chr1 | 156.5588 | 156.6496 | 5.449245 | 1.0000000 |
| 11352 | ENSMUSG00000026596 | Abl2 | v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene) | synonymous_variant | 16 | chr1 | 156.5588 | 156.6496 | 5.449245 | 1.0000000 |
| 12290 | ENSMUSG00000004110 | Cacna1e | calcium channel, voltage-dependent, R type, alpha 1E subunit | synonymous_variant | 47 | chr1 | 154.3907 | 154.8845 | 4.054498 | 1.0000000 |
| 12290 | ENSMUSG00000004110 | Cacna1e | calcium channel, voltage-dependent, R type, alpha 1E subunit | downstream_gene_variant | 30 | chr1 | 154.3907 | 154.8845 | 4.054498 | 1.0000000 |
| 12290 | ENSMUSG00000004110 | Cacna1e | calcium channel, voltage-dependent, R type, alpha 1E subunit | 3_prime_UTR_variant | 156 | chr1 | 154.3907 | 154.8845 | 4.054498 | 1.0000000 |
| 12290 | ENSMUSG00000004110 | Cacna1e | calcium channel, voltage-dependent, R type, alpha 1E subunit | splice_region_variant | 1 | chr1 | 154.3907 | 154.8845 | 4.054498 | 1.0000000 |
| 12290 | ENSMUSG00000004110 | Cacna1e | calcium channel, voltage-dependent, R type, alpha 1E subunit | non_coding_transcript_exon_variant | 71 | chr1 | 154.3907 | 154.8845 | 4.054498 | 1.0000000 |
| 12290 | ENSMUSG00000004110 | Cacna1e | calcium channel, voltage-dependent, R type, alpha 1E subunit | intron_variant | 54 | chr1 | 154.3907 | 154.8845 | 4.054498 | 1.0000000 |
| 12290 | ENSMUSG00000004110 | Cacna1e | calcium channel, voltage-dependent, R type, alpha 1E subunit | upstream_gene_variant | 4 | chr1 | 154.3907 | 154.8845 | 4.054498 | 1.0000000 |
| 12290 | ENSMUSG00000004110 | Cacna1e | calcium channel, voltage-dependent, R type, alpha 1E subunit | 5_prime_UTR_variant | 4 | chr1 | 154.3907 | 154.8845 | 4.054498 | 1.0000000 |
| 12290 | ENSMUSG00000004110 | Cacna1e | calcium channel, voltage-dependent, R type, alpha 1E subunit | non_coding_transcript_variant | 73 | chr1 | 154.3907 | 154.8845 | 4.054498 | 1.0000000 |
| 14645 | ENSMUSG00000026473 | Glul | glutamate-ammonia ligase (glutamine synthetase) | intron_variant | 5 | chr1 | 153.8999 | 153.9097 | 8.551207 | 0.1386641 |
| 14645 | ENSMUSG00000026473 | Glul | glutamate-ammonia ligase (glutamine synthetase) | non_coding_transcript_variant | 7 | chr1 | 153.8999 | 153.9097 | 8.551207 | 0.1386641 |
| 14645 | ENSMUSG00000026473 | Glul | glutamate-ammonia ligase (glutamine synthetase) | synonymous_variant | 10 | chr1 | 153.8999 | 153.9097 | 8.551207 | 0.1386641 |
| 14645 | ENSMUSG00000026473 | Glul | glutamate-ammonia ligase (glutamine synthetase) | 5_prime_UTR_variant | 1 | chr1 | 153.8999 | 153.9097 | 8.551207 | 0.1386641 |
| 14645 | ENSMUSG00000026473 | Glul | glutamate-ammonia ligase (glutamine synthetase) | upstream_gene_variant | 1 | chr1 | 153.8999 | 153.9097 | 8.551207 | 0.1386641 |
| 14645 | ENSMUSG00000026473 | Glul | glutamate-ammonia ligase (glutamine synthetase) | 5_prime_UTR_variant | 1 | chr1 | 153.8999 | 153.9097 | 8.551207 | 0.1386641 |
| 14645 | ENSMUSG00000026473 | Glul | glutamate-ammonia ligase (glutamine synthetase) | downstream_gene_variant | 22 | chr1 | 153.8999 | 153.9097 | 8.551207 | 0.1386641 |
| 14645 | ENSMUSG00000026473 | Glul | glutamate-ammonia ligase (glutamine synthetase) | non_coding_transcript_exon_variant | 7 | chr1 | 153.8999 | 153.9097 | 8.551207 | 0.1386641 |
| 14645 | ENSMUSG00000026473 | Glul | glutamate-ammonia ligase (glutamine synthetase) | 3_prime_UTR_variant | 13 | chr1 | 153.8999 | 153.9097 | 8.551207 | 0.1386641 |
| 14645 | ENSMUSG00000026473 | Glul | glutamate-ammonia ligase (glutamine synthetase) | upstream_gene_variant | 5 | chr1 | 153.8999 | 153.9097 | 8.551207 | 0.1386641 |
| 15064 | ENSMUSG00000026471 | Mr1 | major histocompatibility complex, class I-related | upstream_gene_variant | 23 | chr1 | 155.1273 | 155.1468 | 7.197759 | 1.0000000 |
| 15064 | ENSMUSG00000026471 | Mr1 | major histocompatibility complex, class I-related | splice_region_variant | 4 | chr1 | 155.1273 | 155.1468 | 7.197759 | 1.0000000 |
| 15064 | ENSMUSG00000026471 | Mr1 | major histocompatibility complex, class I-related | downstream_gene_variant | 48 | chr1 | 155.1273 | 155.1468 | 7.197759 | 1.0000000 |
| 15064 | ENSMUSG00000026471 | Mr1 | major histocompatibility complex, class I-related | missense_variant | 11 | chr1 | 155.1273 | 155.1468 | 7.197759 | 1.0000000 |
| 15064 | ENSMUSG00000026471 | Mr1 | major histocompatibility complex, class I-related | 3_prime_UTR_variant | 50 | chr1 | 155.1273 | 155.1468 | 7.197759 | 1.0000000 |
| 15064 | ENSMUSG00000026471 | Mr1 | major histocompatibility complex, class I-related | non_coding_transcript_variant | 81 | chr1 | 155.1273 | 155.1468 | 7.197759 | 1.0000000 |
| 15064 | ENSMUSG00000026471 | Mr1 | major histocompatibility complex, class I-related | synonymous_variant | 12 | chr1 | 155.1273 | 155.1468 | 7.197759 | 1.0000000 |
| 15064 | ENSMUSG00000026471 | Mr1 | major histocompatibility complex, class I-related | non_coding_transcript_exon_variant | 81 | chr1 | 155.1273 | 155.1468 | 7.197759 | 1.0000000 |
| 15064 | ENSMUSG00000026471 | Mr1 | major histocompatibility complex, class I-related | intron_variant | 22 | chr1 | 155.1273 | 155.1468 | 7.197759 | 1.0000000 |
| 15064 | ENSMUSG00000026471 | Mr1 | major histocompatibility complex, class I-related | NMD_transcript_variant | 84 | chr1 | 155.1273 | 155.1468 | 7.197759 | 1.0000000 |
| 15939 | ENSMUSG00000056708 | Ier5 | immediate early response 5 | 3_prime_UTR_variant | 7 | chr1 | 155.0964 | 155.0996 | 6.089479 | 0.0027359 |
| 15939 | ENSMUSG00000056708 | Ier5 | immediate early response 5 | missense_variant | 1 | chr1 | 155.0964 | 155.0996 | 6.089479 | 0.0027359 |
| 15939 | ENSMUSG00000056708 | Ier5 | immediate early response 5 | 5_prime_UTR_variant | 2 | chr1 | 155.0964 | 155.0996 | 6.089479 | 0.0027359 |
| 16872 | ENSMUSG00000026468 | Lhx4 | LIM homeobox protein 4 | synonymous_variant | 5 | chr1 | 155.6980 | 155.7517 | 3.996348 | 0.0021133 |
| 16872 | ENSMUSG00000026468 | Lhx4 | LIM homeobox protein 4 | 5_prime_UTR_variant | 5 | chr1 | 155.6980 | 155.7517 | 3.996348 | 0.0021133 |
| 16872 | ENSMUSG00000026468 | Lhx4 | LIM homeobox protein 4 | 3_prime_UTR_variant | 48 | chr1 | 155.6980 | 155.7517 | 3.996348 | 0.0021133 |
| 16872 | ENSMUSG00000026468 | Lhx4 | LIM homeobox protein 4 | downstream_gene_variant | 30 | chr1 | 155.6980 | 155.7517 | 3.996348 | 0.0021133 |
| 16872 | ENSMUSG00000026468 | Lhx4 | LIM homeobox protein 4 | intron_variant | 2 | chr1 | 155.6980 | 155.7517 | 3.996348 | 0.0021133 |
| 170484 | ENSMUSG00000026602 | Nphs2 | nephrosis 2, podocin | missense_variant | 6 | chr1 | 156.3107 | 156.3280 | 3.823199 | 1.0000000 |
| 170484 | ENSMUSG00000026602 | Nphs2 | nephrosis 2, podocin | intron_variant | 3 | chr1 | 156.3107 | 156.3280 | 3.823199 | 1.0000000 |
| 170484 | ENSMUSG00000026602 | Nphs2 | nephrosis 2, podocin | downstream_gene_variant | 26 | chr1 | 156.3107 | 156.3280 | 3.823199 | 1.0000000 |
| 170484 | ENSMUSG00000026602 | Nphs2 | nephrosis 2, podocin | 3_prime_UTR_variant | 30 | chr1 | 156.3107 | 156.3280 | 3.823199 | 1.0000000 |
| 170484 | ENSMUSG00000026602 | Nphs2 | nephrosis 2, podocin | downstream_gene_variant | 6 | chr1 | 156.3107 | 156.3280 | 3.823199 | 1.0000000 |
| 170484 | ENSMUSG00000026602 | Nphs2 | nephrosis 2, podocin | 5_prime_UTR_variant | 2 | chr1 | 156.3107 | 156.3280 | 3.823199 | 1.0000000 |
| 170484 | ENSMUSG00000026602 | Nphs2 | nephrosis 2, podocin | upstream_gene_variant | 6 | chr1 | 156.3107 | 156.3280 | 3.823199 | 1.0000000 |
| 170484 | ENSMUSG00000026602 | Nphs2 | nephrosis 2, podocin | synonymous_variant | 10 | chr1 | 156.3107 | 156.3280 | 3.823199 | 1.0000000 |
| 19734 | ENSMUSG00000026475 | Rgs16 | regulator of G-protein signaling 16 | 3_prime_UTR_variant | 26 | chr1 | 153.7403 | 153.7455 | 5.689600 | 0.0067758 |
| 19734 | ENSMUSG00000026475 | Rgs16 | regulator of G-protein signaling 16 | missense_variant | 1 | chr1 | 153.7403 | 153.7455 | 5.689600 | 0.0067758 |
| 19734 | ENSMUSG00000026475 | Rgs16 | regulator of G-protein signaling 16 | synonymous_variant | 2 | chr1 | 153.7403 | 153.7455 | 5.689600 | 0.0067758 |
| 19734 | ENSMUSG00000026475 | Rgs16 | regulator of G-protein signaling 16 | 5_prime_UTR_variant | 1 | chr1 | 153.7403 | 153.7455 | 5.689600 | 0.0067758 |
| 19734 | ENSMUSG00000026475 | Rgs16 | regulator of G-protein signaling 16 | downstream_gene_variant | 7 | chr1 | 153.7403 | 153.7455 | 5.689600 | 0.0067758 |
| 19734 | ENSMUSG00000026475 | Rgs16 | regulator of G-protein signaling 16 | upstream_gene_variant | 1 | chr1 | 153.7403 | 153.7455 | 5.689600 | 0.0067758 |
| 19775 | ENSMUSG00000026469 | Xpr1 | xenotropic and polytropic retrovirus receptor 1 | splice_region_variant | 1 | chr1 | 155.2757 | 155.4174 | 7.413397 | 1.0000000 |
| 19775 | ENSMUSG00000026469 | Xpr1 | xenotropic and polytropic retrovirus receptor 1 | 3_prime_UTR_variant | 58 | chr1 | 155.2757 | 155.4174 | 7.413397 | 1.0000000 |
| 19775 | ENSMUSG00000026469 | Xpr1 | xenotropic and polytropic retrovirus receptor 1 | downstream_gene_variant | 47 | chr1 | 155.2757 | 155.4174 | 7.413397 | 1.0000000 |
| 19775 | ENSMUSG00000026469 | Xpr1 | xenotropic and polytropic retrovirus receptor 1 | synonymous_variant | 11 | chr1 | 155.2757 | 155.4174 | 7.413397 | 1.0000000 |
| 19775 | ENSMUSG00000026469 | Xpr1 | xenotropic and polytropic retrovirus receptor 1 | non_coding_transcript_exon_variant | 72 | chr1 | 155.2757 | 155.4174 | 7.413397 | 1.0000000 |
| 19775 | ENSMUSG00000026469 | Xpr1 | xenotropic and polytropic retrovirus receptor 1 | non_coding_transcript_variant | 72 | chr1 | 155.2757 | 155.4174 | 7.413397 | 1.0000000 |
| 19775 | ENSMUSG00000026469 | Xpr1 | xenotropic and polytropic retrovirus receptor 1 | missense_variant | 8 | chr1 | 155.2757 | 155.4174 | 7.413397 | 1.0000000 |
| 19775 | ENSMUSG00000026469 | Xpr1 | xenotropic and polytropic retrovirus receptor 1 | intron_variant | 57 | chr1 | 155.2757 | 155.4174 | 7.413397 | 1.0000000 |
| 20652 | ENSMUSG00000026600 | Soat1 | sterol O-acyltransferase 1 | downstream_gene_variant | 4 | chr1 | 156.4245 | 156.4743 | 8.877399 | 1.0000000 |
| 20652 | ENSMUSG00000026600 | Soat1 | sterol O-acyltransferase 1 | 3_prime_UTR_variant | 154 | chr1 | 156.4245 | 156.4743 | 8.877399 | 1.0000000 |
| 20652 | ENSMUSG00000026600 | Soat1 | sterol O-acyltransferase 1 | non_coding_transcript_variant | 73 | chr1 | 156.4245 | 156.4743 | 8.877399 | 1.0000000 |
| 20652 | ENSMUSG00000026600 | Soat1 | sterol O-acyltransferase 1 | synonymous_variant | 23 | chr1 | 156.4245 | 156.4743 | 8.877399 | 1.0000000 |
| 20652 | ENSMUSG00000026600 | Soat1 | sterol O-acyltransferase 1 | intron_variant | 28 | chr1 | 156.4245 | 156.4743 | 8.877399 | 1.0000000 |
| 20652 | ENSMUSG00000026600 | Soat1 | sterol O-acyltransferase 1 | non_coding_transcript_exon_variant | 73 | chr1 | 156.4245 | 156.4743 | 8.877399 | 1.0000000 |
| 20652 | ENSMUSG00000026600 | Soat1 | sterol O-acyltransferase 1 | missense_variant | 5 | chr1 | 156.4245 | 156.4743 | 8.877399 | 1.0000000 |
| 20652 | ENSMUSG00000026600 | Soat1 | sterol O-acyltransferase 1 | downstream_gene_variant | 162 | chr1 | 156.4245 | 156.4743 | 8.877399 | 1.0000000 |
| 20652 | ENSMUSG00000026600 | Soat1 | sterol O-acyltransferase 1 | 5_prime_UTR_variant | 6 | chr1 | 156.4245 | 156.4743 | 8.877399 | 1.0000000 |
| 20652 | ENSMUSG00000026600 | Soat1 | sterol O-acyltransferase 1 | upstream_gene_variant | 6 | chr1 | 156.4245 | 156.4743 | 8.877399 | 1.0000000 |
| 207792 | ENSMUSG00000033722 | BC034090 | cDNA sequence BC034090 | missense_variant | 31 | chr1 | 155.2125 | 155.2444 | 3.081962 | 1.0000000 |
| 207792 | ENSMUSG00000033722 | BC034090 | cDNA sequence BC034090 | upstream_gene_variant | 48 | chr1 | 155.2125 | 155.2444 | 3.081962 | 1.0000000 |
| 207792 | ENSMUSG00000033722 | BC034090 | cDNA sequence BC034090 | 3_prime_UTR_variant | 18 | chr1 | 155.2125 | 155.2444 | 3.081962 | 1.0000000 |
| 207792 | ENSMUSG00000033722 | BC034090 | cDNA sequence BC034090 | downstream_gene_variant | 5 | chr1 | 155.2125 | 155.2444 | 3.081962 | 1.0000000 |
| 207792 | ENSMUSG00000033722 | BC034090 | cDNA sequence BC034090 | intron_variant | 13 | chr1 | 155.2125 | 155.2444 | 3.081962 | 1.0000000 |
| 207792 | ENSMUSG00000033722 | BC034090 | cDNA sequence BC034090 | downstream_gene_variant | 64 | chr1 | 155.2125 | 155.2444 | 3.081962 | 1.0000000 |
| 207792 | ENSMUSG00000033722 | BC034090 | cDNA sequence BC034090 | splice_region_variant | 1 | chr1 | 155.2125 | 155.2444 | 3.081962 | 1.0000000 |
| 207792 | ENSMUSG00000033722 | BC034090 | cDNA sequence BC034090 | synonymous_variant | 30 | chr1 | 155.2125 | 155.2444 | 3.081962 | 1.0000000 |
| 207792 | ENSMUSG00000033722 | BC034090 | cDNA sequence BC034090 | 5_prime_UTR_variant | 6 | chr1 | 155.2125 | 155.2444 | 3.081962 | 1.0000000 |
| 207792 | ENSMUSG00000033722 | BC034090 | cDNA sequence BC034090 | non_coding_transcript_exon_variant | 67 | chr1 | 155.2125 | 155.2444 | 3.081962 | 1.0000000 |
| 207792 | ENSMUSG00000033722 | BC034090 | cDNA sequence BC034090 | non_coding_transcript_variant | 72 | chr1 | 155.2125 | 155.2444 | 3.081962 | 1.0000000 |
| 208263 | ENSMUSG00000026466 | Tor1aip1 | torsin A interacting protein 1 | intron_variant | 4 | chr1 | 156.0046 | 156.0365 | 7.121517 | 1.0000000 |
| 208263 | ENSMUSG00000026466 | Tor1aip1 | torsin A interacting protein 1 | non_coding_transcript_exon_variant | 16 | chr1 | 156.0046 | 156.0365 | 7.121517 | 1.0000000 |
| 208263 | ENSMUSG00000026466 | Tor1aip1 | torsin A interacting protein 1 | NMD_transcript_variant | 14 | chr1 | 156.0046 | 156.0365 | 7.121517 | 1.0000000 |
| 208263 | ENSMUSG00000026466 | Tor1aip1 | torsin A interacting protein 1 | synonymous_variant | 14 | chr1 | 156.0046 | 156.0365 | 7.121517 | 1.0000000 |
| 208263 | ENSMUSG00000026466 | Tor1aip1 | torsin A interacting protein 1 | splice_region_variant | 3 | chr1 | 156.0046 | 156.0365 | 7.121517 | 1.0000000 |
| 208263 | ENSMUSG00000026466 | Tor1aip1 | torsin A interacting protein 1 | synonymous_variant | 4 | chr1 | 156.0046 | 156.0365 | 7.121517 | 1.0000000 |
| 208263 | ENSMUSG00000026466 | Tor1aip1 | torsin A interacting protein 1 | missense_variant | 1 | chr1 | 156.0046 | 156.0365 | 7.121517 | 1.0000000 |
| 208263 | ENSMUSG00000026466 | Tor1aip1 | torsin A interacting protein 1 | 5_prime_UTR_variant | 5 | chr1 | 156.0046 | 156.0365 | 7.121517 | 1.0000000 |
| 208263 | ENSMUSG00000026466 | Tor1aip1 | torsin A interacting protein 1 | intron_variant | 13 | chr1 | 156.0046 | 156.0365 | 7.121517 | 1.0000000 |
| 208263 | ENSMUSG00000026466 | Tor1aip1 | torsin A interacting protein 1 | 3_prime_UTR_variant | 29 | chr1 | 156.0046 | 156.0365 | 7.121517 | 1.0000000 |
| 208263 | ENSMUSG00000026466 | Tor1aip1 | torsin A interacting protein 1 | upstream_gene_variant | 20 | chr1 | 156.0046 | 156.0365 | 7.121517 | 1.0000000 |
| 208263 | ENSMUSG00000026466 | Tor1aip1 | torsin A interacting protein 1 | 5_prime_UTR_variant | 12 | chr1 | 156.0046 | 156.0365 | 7.121517 | 1.0000000 |
| 208263 | ENSMUSG00000026466 | Tor1aip1 | torsin A interacting protein 1 | NMD_transcript_variant | 45 | chr1 | 156.0046 | 156.0365 | 7.121517 | 1.0000000 |
| 208263 | ENSMUSG00000026466 | Tor1aip1 | torsin A interacting protein 1 | missense_variant | 11 | chr1 | 156.0046 | 156.0365 | 7.121517 | 1.0000000 |
| 208263 | ENSMUSG00000026466 | Tor1aip1 | torsin A interacting protein 1 | upstream_gene_variant | 23 | chr1 | 156.0046 | 156.0365 | 7.121517 | 1.0000000 |
| 208263 | ENSMUSG00000026466 | Tor1aip1 | torsin A interacting protein 1 | non_coding_transcript_variant | 7 | chr1 | 156.0046 | 156.0365 | 7.121517 | 1.0000000 |
| 208263 | ENSMUSG00000026466 | Tor1aip1 | torsin A interacting protein 1 | non_coding_transcript_variant | 19 | chr1 | 156.0046 | 156.0365 | 7.121517 | 1.0000000 |
| 208263 | ENSMUSG00000026466 | Tor1aip1 | torsin A interacting protein 1 | non_coding_transcript_exon_variant | 3 | chr1 | 156.0046 | 156.0365 | 7.121517 | 1.0000000 |
| 208263 | ENSMUSG00000026466 | Tor1aip1 | torsin A interacting protein 1 | downstream_gene_variant | 36 | chr1 | 156.0046 | 156.0365 | 7.121517 | 1.0000000 |
| 214575 | ENSMUSG00000060985 | Tdrd5 | tudor domain containing 5 | missense_variant | 10 | chr1 | 156.2553 | 156.3037 | 3.470233 | 1.0000000 |
| 214575 | ENSMUSG00000060985 | Tdrd5 | tudor domain containing 5 | intron_variant | 83 | chr1 | 156.2553 | 156.3037 | 3.470233 | 1.0000000 |
| 214575 | ENSMUSG00000060985 | Tdrd5 | tudor domain containing 5 | 3_prime_UTR_variant | 8 | chr1 | 156.2553 | 156.3037 | 3.470233 | 1.0000000 |
| 214575 | ENSMUSG00000060985 | Tdrd5 | tudor domain containing 5 | downstream_gene_variant | 14 | chr1 | 156.2553 | 156.3037 | 3.470233 | 1.0000000 |
| 214575 | ENSMUSG00000060985 | Tdrd5 | tudor domain containing 5 | non_coding_transcript_exon_variant | 85 | chr1 | 156.2553 | 156.3037 | 3.470233 | 1.0000000 |
| 214575 | ENSMUSG00000060985 | Tdrd5 | tudor domain containing 5 | upstream_gene_variant | 13 | chr1 | 156.2553 | 156.3037 | 3.470233 | 1.0000000 |
| 214575 | ENSMUSG00000060985 | Tdrd5 | tudor domain containing 5 | non_coding_transcript_variant | 87 | chr1 | 156.2553 | 156.3037 | 3.470233 | 1.0000000 |
| 214575 | ENSMUSG00000060985 | Tdrd5 | tudor domain containing 5 | synonymous_variant | 15 | chr1 | 156.2553 | 156.3037 | 3.470233 | 1.0000000 |
| 214575 | ENSMUSG00000060985 | Tdrd5 | tudor domain containing 5 | 5_prime_UTR_variant | 3 | chr1 | 156.2553 | 156.3037 | 3.470233 | 1.0000000 |
| 24014 | ENSMUSG00000066800 | Rnasel | ribonuclease L (2’, 5’-oligoisoadenylate synthetase-dependent) | 3_prime_UTR_variant | 19 | chr1 | 153.7494 | 153.7642 | 6.353801 | 0.0000007 |
| 24014 | ENSMUSG00000066800 | Rnasel | ribonuclease L (2’, 5’-oligoisoadenylate synthetase-dependent) | 5_prime_UTR_variant | 13 | chr1 | 153.7494 | 153.7642 | 6.353801 | 0.0000007 |
| 24014 | ENSMUSG00000066800 | Rnasel | ribonuclease L (2’, 5’-oligoisoadenylate synthetase-dependent) | intron_variant | 49 | chr1 | 153.7494 | 153.7642 | 6.353801 | 0.0000007 |
| 24014 | ENSMUSG00000066800 | Rnasel | ribonuclease L (2’, 5’-oligoisoadenylate synthetase-dependent) | non_coding_transcript_exon_variant | 66 | chr1 | 153.7494 | 153.7642 | 6.353801 | 0.0000007 |
| 24014 | ENSMUSG00000066800 | Rnasel | ribonuclease L (2’, 5’-oligoisoadenylate synthetase-dependent) | non_coding_transcript_variant | 66 | chr1 | 153.7494 | 153.7642 | 6.353801 | 0.0000007 |
| 24014 | ENSMUSG00000066800 | Rnasel | ribonuclease L (2’, 5’-oligoisoadenylate synthetase-dependent) | coding_sequence_variant | 6 | chr1 | 153.7494 | 153.7642 | 6.353801 | 0.0000007 |
| 24014 | ENSMUSG00000066800 | Rnasel | ribonuclease L (2’, 5’-oligoisoadenylate synthetase-dependent) | missense_variant | 44 | chr1 | 153.7494 | 153.7642 | 6.353801 | 0.0000007 |
| 24014 | ENSMUSG00000066800 | Rnasel | ribonuclease L (2’, 5’-oligoisoadenylate synthetase-dependent) | synonymous_variant | 14 | chr1 | 153.7494 | 153.7642 | 6.353801 | 0.0000007 |
| 24014 | ENSMUSG00000066800 | Rnasel | ribonuclease L (2’, 5’-oligoisoadenylate synthetase-dependent) | initiator_codon_variant | 4 | chr1 | 153.7494 | 153.7642 | 6.353801 | 0.0000007 |
| 24014 | ENSMUSG00000066800 | Rnasel | ribonuclease L (2’, 5’-oligoisoadenylate synthetase-dependent) | downstream_gene_variant | 30 | chr1 | 153.7494 | 153.7642 | 6.353801 | 0.0000007 |
| 24014 | ENSMUSG00000066800 | Rnasel | ribonuclease L (2’, 5’-oligoisoadenylate synthetase-dependent) | incomplete_terminal_codon_variant | 6 | chr1 | 153.7494 | 153.7642 | 6.353801 | 0.0000007 |
| 24014 | ENSMUSG00000066800 | Rnasel | ribonuclease L (2’, 5’-oligoisoadenylate synthetase-dependent) | upstream_gene_variant | 18 | chr1 | 153.7494 | 153.7642 | 6.353801 | 0.0000007 |
| 24014 | ENSMUSG00000066800 | Rnasel | ribonuclease L (2’, 5’-oligoisoadenylate synthetase-dependent) | upstream_gene_variant | 51 | chr1 | 153.7494 | 153.7642 | 6.353801 | 0.0000007 |
| 240816 | ENSMUSG00000042641 | Rgsl1 | regulator of G-protein signaling like 1 | upstream_gene_variant | 11 | chr1 | 153.7794 | 153.8441 | 2.757036 | 0.0119833 |
| 240816 | ENSMUSG00000042641 | Rgsl1 | regulator of G-protein signaling like 1 | intron_variant | 11 | chr1 | 153.7794 | 153.8441 | 2.757036 | 0.0119833 |
| 240816 | ENSMUSG00000042641 | Rgsl1 | regulator of G-protein signaling like 1 | 5_prime_UTR_variant | 1 | chr1 | 153.7794 | 153.8441 | 2.757036 | 0.0119833 |
| 240816 | ENSMUSG00000042641 | Rgsl1 | regulator of G-protein signaling like 1 | non_coding_transcript_variant | 9 | chr1 | 153.7794 | 153.8441 | 2.757036 | 0.0119833 |
| 240816 | ENSMUSG00000042641 | Rgsl1 | regulator of G-protein signaling like 1 | non_coding_transcript_exon_variant | 8 | chr1 | 153.7794 | 153.8441 | 2.757036 | 0.0119833 |
| 240816 | ENSMUSG00000042641 | Rgsl1 | regulator of G-protein signaling like 1 | 3_prime_UTR_variant | 8 | chr1 | 153.7794 | 153.8441 | 2.757036 | 0.0119833 |
| 240816 | ENSMUSG00000042641 | Rgsl1 | regulator of G-protein signaling like 1 | missense_variant | 2 | chr1 | 153.7794 | 153.8441 | 2.757036 | 0.0119833 |
| 240816 | ENSMUSG00000042641 | Rgsl1 | regulator of G-protein signaling like 1 | NMD_transcript_variant | 16 | chr1 | 153.7794 | 153.8441 | 2.757036 | 0.0119833 |
| 240816 | ENSMUSG00000042641 | Rgsl1 | regulator of G-protein signaling like 1 | downstream_gene_variant | 10 | chr1 | 153.7794 | 153.8441 | 2.757036 | 0.0119833 |
| 240816 | ENSMUSG00000042641 | Rgsl1 | regulator of G-protein signaling like 1 | synonymous_variant | 5 | chr1 | 153.7794 | 153.8441 | 2.757036 | 0.0119833 |
| 240817 | ENSMUSG00000045968 | Teddm2 | transmembrane epididymal family member 2 | downstream_gene_variant | 13 | chr1 | 153.8495 | 153.8512 | 2.796701 | 0.0816218 |
| 240817 | ENSMUSG00000045968 | Teddm2 | transmembrane epididymal family member 2 | intron_variant | 16 | chr1 | 153.8495 | 153.8512 | 2.796701 | 0.0816218 |
| 240817 | ENSMUSG00000045968 | Teddm2 | transmembrane epididymal family member 2 | non_coding_transcript_exon_variant | 1 | chr1 | 153.8495 | 153.8512 | 2.796701 | 0.0816218 |
| 240817 | ENSMUSG00000045968 | Teddm2 | transmembrane epididymal family member 2 | non_coding_transcript_variant | 1 | chr1 | 153.8495 | 153.8512 | 2.796701 | 0.0816218 |
| 240817 | ENSMUSG00000045968 | Teddm2 | transmembrane epididymal family member 2 | intron_variant | 1 | chr1 | 153.8495 | 153.8512 | 2.796701 | 0.0816218 |
| 240817 | ENSMUSG00000045968 | Teddm2 | transmembrane epididymal family member 2 | intron_variant | 38 | chr1 | 153.8495 | 153.8512 | 2.796701 | 0.0816218 |
| 240817 | ENSMUSG00000045968 | Teddm2 | transmembrane epididymal family member 2 | synonymous_variant | 6 | chr1 | 153.8495 | 153.8512 | 2.796701 | 0.0816218 |
| 240817 | ENSMUSG00000045968 | Teddm2 | transmembrane epididymal family member 2 | non_coding_transcript_variant | 1 | chr1 | 153.8495 | 153.8512 | 2.796701 | 0.0816218 |
| 240817 | ENSMUSG00000045968 | Teddm2 | transmembrane epididymal family member 2 | non_coding_transcript_exon_variant | 1 | chr1 | 153.8495 | 153.8512 | 2.796701 | 0.0816218 |
| 240817 | ENSMUSG00000045968 | Teddm2 | transmembrane epididymal family member 2 | intron_variant | 1 | chr1 | 153.8495 | 153.8512 | 2.796701 | 0.0816218 |
| 240817 | ENSMUSG00000045968 | Teddm2 | transmembrane epididymal family member 2 | splice_region_variant | 1 | chr1 | 153.8495 | 153.8512 | 2.796701 | 0.0816218 |
| 240817 | ENSMUSG00000045968 | Teddm2 | transmembrane epididymal family member 2 | 5_prime_UTR_variant | 2 | chr1 | 153.8495 | 153.8512 | 2.796701 | 0.0816218 |
| 240817 | ENSMUSG00000045968 | Teddm2 | transmembrane epididymal family member 2 | upstream_gene_variant | 4 | chr1 | 153.8495 | 153.8512 | 2.796701 | 0.0816218 |
| 240817 | ENSMUSG00000045968 | Teddm2 | transmembrane epididymal family member 2 | missense_variant | 6 | chr1 | 153.8495 | 153.8512 | 2.796701 | 0.0816218 |
| 240817 | ENSMUSG00000045968 | Teddm2 | transmembrane epididymal family member 2 | 3_prime_UTR_variant | 21 | chr1 | 153.8495 | 153.8512 | 2.796701 | 0.0816218 |
| 240817 | ENSMUSG00000045968 | Teddm2 | transmembrane epididymal family member 2 | splice_region_variant | 1 | chr1 | 153.8495 | 153.8512 | 2.796701 | 0.0816218 |
| 240819 | ENSMUSG00000047053 | Teddm1a | transmembrane epididymal protein 1A | missense_variant | 3 | chr1 | 153.8917 | 153.8931 | 3.454632 | 0.0591840 |
| 240819 | ENSMUSG00000047053 | Teddm1a | transmembrane epididymal protein 1A | synonymous_variant | 3 | chr1 | 153.8917 | 153.8931 | 3.454632 | 0.0591840 |
| 240819 | ENSMUSG00000047053 | Teddm1a | transmembrane epididymal protein 1A | 3_prime_UTR_variant | 10 | chr1 | 153.8917 | 153.8931 | 3.454632 | 0.0591840 |
| 240832 | ENSMUSG00000050565 | Tor1aip2 | torsin A interacting protein 2 | missense_variant | 11 | chr1 | 156.0354 | 156.0689 | 6.736217 | 1.0000000 |
| 240832 | ENSMUSG00000050565 | Tor1aip2 | torsin A interacting protein 2 | non_coding_transcript_exon_variant | 17 | chr1 | 156.0354 | 156.0689 | 6.736217 | 1.0000000 |
| 240832 | ENSMUSG00000050565 | Tor1aip2 | torsin A interacting protein 2 | 3_prime_UTR_variant | 78 | chr1 | 156.0354 | 156.0689 | 6.736217 | 1.0000000 |
| 240832 | ENSMUSG00000050565 | Tor1aip2 | torsin A interacting protein 2 | intron_variant | 14 | chr1 | 156.0354 | 156.0689 | 6.736217 | 1.0000000 |
| 240832 | ENSMUSG00000050565 | Tor1aip2 | torsin A interacting protein 2 | 5_prime_UTR_variant | 28 | chr1 | 156.0354 | 156.0689 | 6.736217 | 1.0000000 |
| 240832 | ENSMUSG00000050565 | Tor1aip2 | torsin A interacting protein 2 | downstream_gene_variant | 106 | chr1 | 156.0354 | 156.0689 | 6.736217 | 1.0000000 |
| 240832 | ENSMUSG00000050565 | Tor1aip2 | torsin A interacting protein 2 | 5_prime_UTR_variant | 18 | chr1 | 156.0354 | 156.0689 | 6.736217 | 1.0000000 |
| 240832 | ENSMUSG00000050565 | Tor1aip2 | torsin A interacting protein 2 | non_coding_transcript_variant | 17 | chr1 | 156.0354 | 156.0689 | 6.736217 | 1.0000000 |
| 240832 | ENSMUSG00000050565 | Tor1aip2 | torsin A interacting protein 2 | intron_variant | 38 | chr1 | 156.0354 | 156.0689 | 6.736217 | 1.0000000 |
| 240832 | ENSMUSG00000050565 | Tor1aip2 | torsin A interacting protein 2 | synonymous_variant | 14 | chr1 | 156.0354 | 156.0689 | 6.736217 | 1.0000000 |
| 240832 | ENSMUSG00000050565 | Tor1aip2 | torsin A interacting protein 2 | upstream_gene_variant | 23 | chr1 | 156.0354 | 156.0689 | 6.736217 | 1.0000000 |
| 240832 | ENSMUSG00000050565 | Tor1aip2 | torsin A interacting protein 2 | upstream_gene_variant | 33 | chr1 | 156.0354 | 156.0689 | 6.736217 | 1.0000000 |
| 329271 | ENSMUSG00000100334 | C230024C17Rik | RIKEN cDNA C230024C17 gene | non_coding_transcript_variant | 46 | chr1 | 153.7212 | 153.7378 | 3.184680 | 0.0116277 |
| 329271 | ENSMUSG00000100334 | C230024C17Rik | RIKEN cDNA C230024C17 gene | non_coding_transcript_exon_variant | 46 | chr1 | 153.7212 | 153.7378 | 3.184680 | 0.0116277 |
| 329271 | ENSMUSG00000100334 | C230024C17Rik | RIKEN cDNA C230024C17 gene | upstream_gene_variant | 1 | chr1 | 153.7212 | 153.7378 | 3.184680 | 0.0116277 |
| 329274 | ENSMUSG00000015484 | Fam163a | family with sequence similarity 163, member A | 3_prime_UTR_variant | 48 | chr1 | 156.0760 | 156.2050 | 3.732818 | 0.0001058 |
| 329274 | ENSMUSG00000015484 | Fam163a | family with sequence similarity 163, member A | missense_variant | 1 | chr1 | 156.0760 | 156.2050 | 3.732818 | 0.0001058 |
| 329274 | ENSMUSG00000015484 | Fam163a | family with sequence similarity 163, member A | 5_prime_UTR_variant | 2 | chr1 | 156.0760 | 156.2050 | 3.732818 | 0.0001058 |
| 329274 | ENSMUSG00000015484 | Fam163a | family with sequence similarity 163, member A | synonymous_variant | 4 | chr1 | 156.0760 | 156.2050 | 3.732818 | 0.0001058 |
| 433365 | ENSMUSG00000043282 | Teddm1b | transmembrane epididymal protein 1B | 5_prime_UTR_variant | 2 | chr1 | 153.8743 | 153.8769 | 3.481265 | 0.9518334 |
| 433365 | ENSMUSG00000043282 | Teddm1b | transmembrane epididymal protein 1B | missense_variant | 7 | chr1 | 153.8743 | 153.8769 | 3.481265 | 0.9518334 |
| 433365 | ENSMUSG00000043282 | Teddm1b | transmembrane epididymal protein 1B | 3_prime_UTR_variant | 22 | chr1 | 153.8743 | 153.8769 | 3.481265 | 0.9518334 |
| 433365 | ENSMUSG00000043282 | Teddm1b | transmembrane epididymal protein 1B | synonymous_variant | 7 | chr1 | 153.8743 | 153.8769 | 3.481265 | 0.9518334 |
| 433367 | ENSMUSG00000073535 | Gm5532 | predicted gene 5532 | non_coding_transcript_exon_variant | 36 | chr1 | 155.5202 | 155.5271 | 3.559297 | 1.0000000 |
| 433367 | ENSMUSG00000073535 | Gm5532 | predicted gene 5532 | intron_variant | 4 | chr1 | 155.5202 | 155.5271 | 3.559297 | 1.0000000 |
| 433367 | ENSMUSG00000073535 | Gm5532 | predicted gene 5532 | splice_region_variant | 1 | chr1 | 155.5202 | 155.5271 | 3.559297 | 1.0000000 |
| 433367 | ENSMUSG00000073535 | Gm5532 | predicted gene 5532 | downstream_gene_variant | 30 | chr1 | 155.5202 | 155.5271 | 3.559297 | 1.0000000 |
| 433367 | ENSMUSG00000073535 | Gm5532 | predicted gene 5532 | non_coding_transcript_variant | 36 | chr1 | 155.5202 | 155.5271 | 3.559297 | 1.0000000 |
| 58244 | ENSMUSG00000026470 | Stx6 | syntaxin 6 | non_coding_transcript_variant | 17 | chr1 | 155.1587 | 155.2083 | 6.736441 | 1.0000000 |
| 58244 | ENSMUSG00000026470 | Stx6 | syntaxin 6 | missense_variant | 4 | chr1 | 155.1587 | 155.2083 | 6.736441 | 1.0000000 |
| 58244 | ENSMUSG00000026470 | Stx6 | syntaxin 6 | upstream_gene_variant | 9 | chr1 | 155.1587 | 155.2083 | 6.736441 | 1.0000000 |
| 58244 | ENSMUSG00000026470 | Stx6 | syntaxin 6 | 3_prime_UTR_variant | 25 | chr1 | 155.1587 | 155.2083 | 6.736441 | 1.0000000 |
| 58244 | ENSMUSG00000026470 | Stx6 | syntaxin 6 | synonymous_variant | 1 | chr1 | 155.1587 | 155.2083 | 6.736441 | 1.0000000 |
| 58244 | ENSMUSG00000026470 | Stx6 | syntaxin 6 | NMD_transcript_variant | 14 | chr1 | 155.1587 | 155.2083 | 6.736441 | 1.0000000 |
| 58244 | ENSMUSG00000026470 | Stx6 | syntaxin 6 | non_coding_transcript_exon_variant | 15 | chr1 | 155.1587 | 155.2083 | 6.736441 | 1.0000000 |
| 58244 | ENSMUSG00000026470 | Stx6 | syntaxin 6 | downstream_gene_variant | 32 | chr1 | 155.1587 | 155.2083 | 6.736441 | 1.0000000 |
| 58244 | ENSMUSG00000026470 | Stx6 | syntaxin 6 | intron_variant | 31 | chr1 | 155.1587 | 155.2083 | 6.736441 | 1.0000000 |
| 58244 | ENSMUSG00000026470 | Stx6 | syntaxin 6 | downstream_gene_variant | 12 | chr1 | 155.1587 | 155.2083 | 6.736441 | 1.0000000 |
| 671336 | ENSMUSG00000096950 | Gm9530 | predicted gene 9530 | non_coding_transcript_variant | 24 | chr1 | 155.0634 | 155.0833 | 3.215301 | 0.4819791 |
| 671336 | ENSMUSG00000096950 | Gm9530 | predicted gene 9530 | non_coding_transcript_exon_variant | 24 | chr1 | 155.0634 | 155.0833 | 3.215301 | 0.4819791 |
| 72482 | ENSMUSG00000033701 | Acbd6 | acyl-Coenzyme A binding domain containing 6 | 3_prime_UTR_variant | 45 | chr1 | 155.5581 | 155.6913 | 5.204439 | 1.0000000 |
| 72482 | ENSMUSG00000033701 | Acbd6 | acyl-Coenzyme A binding domain containing 6 | non_coding_transcript_variant | 18 | chr1 | 155.5581 | 155.6913 | 5.204439 | 1.0000000 |
| 72482 | ENSMUSG00000033701 | Acbd6 | acyl-Coenzyme A binding domain containing 6 | missense_variant | 4 | chr1 | 155.5581 | 155.6913 | 5.204439 | 1.0000000 |
| 72482 | ENSMUSG00000033701 | Acbd6 | acyl-Coenzyme A binding domain containing 6 | non_coding_transcript_exon_variant | 16 | chr1 | 155.5581 | 155.6913 | 5.204439 | 1.0000000 |
| 72482 | ENSMUSG00000033701 | Acbd6 | acyl-Coenzyme A binding domain containing 6 | downstream_gene_variant | 43 | chr1 | 155.5581 | 155.6913 | 5.204439 | 1.0000000 |
| 72482 | ENSMUSG00000033701 | Acbd6 | acyl-Coenzyme A binding domain containing 6 | 5_prime_UTR_variant | 15 | chr1 | 155.5581 | 155.6913 | 5.204439 | 1.0000000 |
| 72482 | ENSMUSG00000033701 | Acbd6 | acyl-Coenzyme A binding domain containing 6 | NMD_transcript_variant | 12 | chr1 | 155.5581 | 155.6913 | 5.204439 | 1.0000000 |
| 72482 | ENSMUSG00000033701 | Acbd6 | acyl-Coenzyme A binding domain containing 6 | intron_variant | 21 | chr1 | 155.5581 | 155.6913 | 5.204439 | 1.0000000 |
| 72482 | ENSMUSG00000033701 | Acbd6 | acyl-Coenzyme A binding domain containing 6 | synonymous_variant | 10 | chr1 | 155.5581 | 155.6913 | 5.204439 | 1.0000000 |
| 72482 | ENSMUSG00000033701 | Acbd6 | acyl-Coenzyme A binding domain containing 6 | upstream_gene_variant | 23 | chr1 | 155.5581 | 155.6913 | 5.204439 | 1.0000000 |
| 74081 | ENSMUSG00000033671 | Cep350 | centrosomal protein 350 | synonymous_variant | 41 | chr1 | 155.8450 | 155.9733 | 7.147313 | 1.0000000 |
| 74081 | ENSMUSG00000033671 | Cep350 | centrosomal protein 350 | 3_prime_UTR_variant | 26 | chr1 | 155.8450 | 155.9733 | 7.147313 | 1.0000000 |
| 74081 | ENSMUSG00000033671 | Cep350 | centrosomal protein 350 | upstream_gene_variant | 17 | chr1 | 155.8450 | 155.9733 | 7.147313 | 1.0000000 |
| 74081 | ENSMUSG00000033671 | Cep350 | centrosomal protein 350 | non_coding_transcript_exon_variant | 14 | chr1 | 155.8450 | 155.9733 | 7.147313 | 1.0000000 |
| 74081 | ENSMUSG00000033671 | Cep350 | centrosomal protein 350 | downstream_gene_variant | 45 | chr1 | 155.8450 | 155.9733 | 7.147313 | 1.0000000 |
| 74081 | ENSMUSG00000033671 | Cep350 | centrosomal protein 350 | missense_variant | 17 | chr1 | 155.8450 | 155.9733 | 7.147313 | 1.0000000 |
| 74081 | ENSMUSG00000033671 | Cep350 | centrosomal protein 350 | non_coding_transcript_variant | 14 | chr1 | 155.8450 | 155.9733 | 7.147313 | 1.0000000 |
| 75233 | ENSMUSG00000100221 | 4930532M18Rik | RIKEN cDNA 4930532M18 gene | non_coding_transcript_exon_variant | 5 | chr1 | 154.2557 | 154.2704 | NA | NA |
| 75233 | ENSMUSG00000100221 | 4930532M18Rik | RIKEN cDNA 4930532M18 gene | upstream_gene_variant | 1 | chr1 | 154.2557 | 154.2704 | NA | NA |
| 75233 | ENSMUSG00000100221 | 4930532M18Rik | RIKEN cDNA 4930532M18 gene | intron_variant | 1 | chr1 | 154.2557 | 154.2704 | NA | NA |
| 75233 | ENSMUSG00000100221 | 4930532M18Rik | RIKEN cDNA 4930532M18 gene | upstream_gene_variant | 2 | chr1 | 154.2557 | 154.2704 | NA | NA |
| 75233 | ENSMUSG00000100221 | 4930532M18Rik | RIKEN cDNA 4930532M18 gene | intron_variant | 2 | chr1 | 154.2557 | 154.2704 | NA | NA |
| 75233 | ENSMUSG00000100221 | 4930532M18Rik | RIKEN cDNA 4930532M18 gene | non_coding_transcript_variant | 2 | chr1 | 154.2557 | 154.2704 | NA | NA |
| 75233 | ENSMUSG00000100221 | 4930532M18Rik | RIKEN cDNA 4930532M18 gene | non_coding_transcript_variant | 5 | chr1 | 154.2557 | 154.2704 | NA | NA |
| 75233 | ENSMUSG00000100221 | 4930532M18Rik | RIKEN cDNA 4930532M18 gene | downstream_gene_variant | 2 | chr1 | 154.2557 | 154.2704 | NA | NA |
| 77352 | ENSMUSG00000026601 | Axdnd1 | axonemal dynein light chain domain containing 1 | downstream_gene_variant | 4 | chr1 | 156.3235 | 156.4212 | 3.158642 | 0.6025583 |
| 77352 | ENSMUSG00000026601 | Axdnd1 | axonemal dynein light chain domain containing 1 | intron_variant | 40 | chr1 | 156.3235 | 156.4212 | 3.158642 | 0.6025583 |
| 77352 | ENSMUSG00000026601 | Axdnd1 | axonemal dynein light chain domain containing 1 | intron_variant | 34 | chr1 | 156.3235 | 156.4212 | 3.158642 | 0.6025583 |
| 77352 | ENSMUSG00000026601 | Axdnd1 | axonemal dynein light chain domain containing 1 | downstream_gene_variant | 16 | chr1 | 156.3235 | 156.4212 | 3.158642 | 0.6025583 |
| 77352 | ENSMUSG00000026601 | Axdnd1 | axonemal dynein light chain domain containing 1 | upstream_gene_variant | 10 | chr1 | 156.3235 | 156.4212 | 3.158642 | 0.6025583 |
| 77352 | ENSMUSG00000026601 | Axdnd1 | axonemal dynein light chain domain containing 1 | 3_prime_UTR_variant | 11 | chr1 | 156.3235 | 156.4212 | 3.158642 | 0.6025583 |
| 77352 | ENSMUSG00000026601 | Axdnd1 | axonemal dynein light chain domain containing 1 | splice_region_variant | 5 | chr1 | 156.3235 | 156.4212 | 3.158642 | 0.6025583 |
| 77352 | ENSMUSG00000026601 | Axdnd1 | axonemal dynein light chain domain containing 1 | 5_prime_UTR_variant | 4 | chr1 | 156.3235 | 156.4212 | 3.158642 | 0.6025583 |
| 77352 | ENSMUSG00000026601 | Axdnd1 | axonemal dynein light chain domain containing 1 | upstream_gene_variant | 34 | chr1 | 156.3235 | 156.4212 | 3.158642 | 0.6025583 |
| 77352 | ENSMUSG00000026601 | Axdnd1 | axonemal dynein light chain domain containing 1 | non_coding_transcript_variant | 50 | chr1 | 156.3235 | 156.4212 | 3.158642 | 0.6025583 |
| 77352 | ENSMUSG00000026601 | Axdnd1 | axonemal dynein light chain domain containing 1 | synonymous_variant | 12 | chr1 | 156.3235 | 156.4212 | 3.158642 | 0.6025583 |
| 77352 | ENSMUSG00000026601 | Axdnd1 | axonemal dynein light chain domain containing 1 | non_coding_transcript_exon_variant | 50 | chr1 | 156.3235 | 156.4212 | 3.158642 | 0.6025583 |
| 77352 | ENSMUSG00000026601 | Axdnd1 | axonemal dynein light chain domain containing 1 | missense_variant | 14 | chr1 | 156.3235 | 156.4212 | 3.158642 | 0.6025583 |
| 78112 | ENSMUSG00000099933 | 4930452N14Rik | RIKEN cDNA 4930452N14 gene | non_coding_transcript_exon_variant | 8 | chr1 | 154.2415 | 154.2569 | 4.234028 | 0.0001918 |
| 78112 | ENSMUSG00000099933 | 4930452N14Rik | RIKEN cDNA 4930452N14 gene | non_coding_transcript_variant | 1 | chr1 | 154.2415 | 154.2569 | 4.234028 | 0.0001918 |
| 78112 | ENSMUSG00000099933 | 4930452N14Rik | RIKEN cDNA 4930452N14 gene | upstream_gene_variant | 1 | chr1 | 154.2415 | 154.2569 | 4.234028 | 0.0001918 |
| 78112 | ENSMUSG00000099933 | 4930452N14Rik | RIKEN cDNA 4930452N14 gene | intron_variant | 1 | chr1 | 154.2415 | 154.2569 | 4.234028 | 0.0001918 |
| 78112 | ENSMUSG00000099933 | 4930452N14Rik | RIKEN cDNA 4930452N14 gene | non_coding_transcript_variant | 8 | chr1 | 154.2415 | 154.2569 | 4.234028 | 0.0001918 |
For each QTL peak with a LOD > 7.7, we searched for colocated QTL for other phenotypes with LOD >= 6.0.
| Phenotype | Chr | Pos | LOD | CI low | CI high |
|---|---|---|---|---|---|
| lung_vegf | 2 | 93.5469 | 7.853143 | 92.1471 | 94.28775 |
The lung Vegf QTL on Chr 2 is not colocated with any other QTL.
Below is the association mapping plot for lung Vegf.
There are 33 unique genes in the QTL interval. We measured expression for 28 of these genes.
Plot a histogram of the correlations.
The correlations are all distributed more as I would expect. Plot the gene with the highest correlation vs. the phenotype, colored by DO generation.
Produce a list of genes with mean expression and correlation p-values.
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
| entrez | ensembl | symbol | genename | consequence | num_snps | chr | start | end | mean_expr | bonf.p.value |
|---|---|---|---|---|---|---|---|---|---|---|
| 100038525 | ENSMUSG00000075025 | Gm10804 | predicted gene 10804 | non_coding_transcript_exon_variant | 51 | chr2 | 93.45282 | 93.46987 | 2.201581 | 1 |
| 100038525 | ENSMUSG00000075025 | Gm10804 | predicted gene 10804 | upstream_gene_variant | 21 | chr2 | 93.45282 | 93.46987 | 2.201581 | 1 |
| 100038525 | ENSMUSG00000075025 | Gm10804 | predicted gene 10804 | intron_variant | 14 | chr2 | 93.45282 | 93.46987 | 2.201581 | 1 |
| 100038525 | ENSMUSG00000075025 | Gm10804 | predicted gene 10804 | downstream_gene_variant | 28 | chr2 | 93.45282 | 93.46987 | 2.201581 | 1 |
| 100038525 | ENSMUSG00000075025 | Gm10804 | predicted gene 10804 | non_coding_transcript_variant | 51 | chr2 | 93.45282 | 93.46987 | 2.201581 | 1 |
| 100038525 | ENSMUSG00000075025 | Gm10804 | predicted gene 10804 | intron_variant | 2 | chr2 | 93.45282 | 93.46987 | 2.201581 | 1 |
| 100038525 | ENSMUSG00000075025 | Gm10804 | predicted gene 10804 | non_coding_transcript_variant | 2 | chr2 | 93.45282 | 93.46987 | 2.201581 | 1 |
| 100038525 | ENSMUSG00000075025 | Gm10804 | predicted gene 10804 | upstream_gene_variant | 4 | chr2 | 93.45282 | 93.46987 | 2.201581 | 1 |
| 100042784 | ENSMUSG00000075028 | Prdm11 | PR domain containing 11 | 5_prime_UTR_variant | 4 | chr2 | 92.97202 | 93.04617 | 4.668000 | 1 |
| 100042784 | ENSMUSG00000075028 | Prdm11 | PR domain containing 11 | non_coding_transcript_exon_variant | 57 | chr2 | 92.97202 | 93.04617 | 4.668000 | 1 |
| 100042784 | ENSMUSG00000075028 | Prdm11 | PR domain containing 11 | non_coding_transcript_variant | 57 | chr2 | 92.97202 | 93.04617 | 4.668000 | 1 |
| 100042784 | ENSMUSG00000075028 | Prdm11 | PR domain containing 11 | downstream_gene_variant | 80 | chr2 | 92.97202 | 93.04617 | 4.668000 | 1 |
| 100042784 | ENSMUSG00000075028 | Prdm11 | PR domain containing 11 | upstream_gene_variant | 3 | chr2 | 92.97202 | 93.04617 | 4.668000 | 1 |
| 100042784 | ENSMUSG00000075028 | Prdm11 | PR domain containing 11 | 3_prime_UTR_variant | 54 | chr2 | 92.97202 | 93.04617 | 4.668000 | 1 |
| 100042784 | ENSMUSG00000075028 | Prdm11 | PR domain containing 11 | intron_variant | 88 | chr2 | 92.97202 | 93.04617 | 4.668000 | 1 |
| 100042784 | ENSMUSG00000075028 | Prdm11 | PR domain containing 11 | missense_variant | 12 | chr2 | 92.97202 | 93.04617 | 4.668000 | 1 |
| 100042784 | ENSMUSG00000075028 | Prdm11 | PR domain containing 11 | synonymous_variant | 31 | chr2 | 92.97202 | 93.04617 | 4.668000 | 1 |
| 100042784 | ENSMUSG00000075028 | Prdm11 | PR domain containing 11 | intron_variant | 89 | chr2 | 92.97202 | 93.04617 | 4.668000 | 1 |
| 100316756 | ENSMUSG00000088639 | Mir1955 | microRNA 1955 | upstream_gene_variant | 2 | chr2 | 92.19198 | 92.19207 | 2.490862 | 1 |
| 102465605 | ENSMUSG00000099238 | Mir7001 | microRNA 7001 | downstream_gene_variant | 40 | chr2 | 93.42193 | 93.42201 | NA | NA |
| 102465605 | ENSMUSG00000099238 | Mir7001 | microRNA 7001 | non_coding_transcript_exon_variant | 1 | chr2 | 93.42193 | 93.42201 | NA | NA |
| 102465605 | ENSMUSG00000099238 | Mir7001 | microRNA 7001 | non_coding_transcript_variant | 1 | chr2 | 93.42193 | 93.42201 | NA | NA |
| 102465605 | ENSMUSG00000099238 | Mir7001 | microRNA 7001 | downstream_gene_variant | 1 | chr2 | 93.42193 | 93.42201 | NA | NA |
| 102465704 | ENSMUSG00000098406 | Mir7222 | microRNA 7222 | non_coding_transcript_exon_variant | 1 | chr2 | 92.59460 | 92.59468 | NA | NA |
| 102465704 | ENSMUSG00000098406 | Mir7222 | microRNA 7222 | non_coding_transcript_variant | 1 | chr2 | 92.59460 | 92.59468 | NA | NA |
| 102466783 | ENSMUSG00000099093 | Mir7000 | microRNA 7000 | upstream_gene_variant | 15 | chr2 | 92.38738 | 92.38745 | NA | NA |
| 102466783 | ENSMUSG00000099093 | Mir7000 | microRNA 7000 | downstream_gene_variant | 17 | chr2 | 92.38738 | 92.38745 | NA | NA |
| 102466783 | ENSMUSG00000099093 | Mir7000 | microRNA 7000 | downstream_gene_variant | 4 | chr2 | 92.38738 | 92.38745 | NA | NA |
| 102466783 | ENSMUSG00000099093 | Mir7000 | microRNA 7000 | mature_miRNA_variant | 1 | chr2 | 92.38738 | 92.38745 | NA | NA |
| 102466819 | ENSMUSG00000099223 | Mir7221 | microRNA 7221 | downstream_gene_variant | 1 | chr2 | 92.59221 | 92.59228 | NA | NA |
| 11695 | ENSMUSG00000040310 | Alx4 | aristaless-like homeobox 4 | synonymous_variant | 11 | chr2 | 93.64238 | 93.68134 | 4.336364 | 1 |
| 11695 | ENSMUSG00000040310 | Alx4 | aristaless-like homeobox 4 | intron_variant | 7 | chr2 | 93.64238 | 93.68134 | 4.336364 | 1 |
| 11695 | ENSMUSG00000040310 | Alx4 | aristaless-like homeobox 4 | missense_variant | 6 | chr2 | 93.64238 | 93.68134 | 4.336364 | 1 |
| 11695 | ENSMUSG00000040310 | Alx4 | aristaless-like homeobox 4 | 3_prime_UTR_variant | 89 | chr2 | 93.64238 | 93.68134 | 4.336364 | 1 |
| 11695 | ENSMUSG00000040310 | Alx4 | aristaless-like homeobox 4 | intron_variant | 22 | chr2 | 93.64238 | 93.68134 | 4.336364 | 1 |
| 11695 | ENSMUSG00000040310 | Alx4 | aristaless-like homeobox 4 | splice_region_variant | 1 | chr2 | 93.64238 | 93.68134 | 4.336364 | 1 |
| 12521 | ENSMUSG00000027215 | Cd82 | CD82 antigen | non_coding_transcript_variant | 48 | chr2 | 93.41911 | 93.46314 | 7.880465 | 1 |
| 12521 | ENSMUSG00000027215 | Cd82 | CD82 antigen | splice_region_variant | 4 | chr2 | 93.41911 | 93.46314 | 7.880465 | 1 |
| 12521 | ENSMUSG00000027215 | Cd82 | CD82 antigen | intron_variant | 26 | chr2 | 93.41911 | 93.46314 | 7.880465 | 1 |
| 12521 | ENSMUSG00000027215 | Cd82 | CD82 antigen | missense_variant | 2 | chr2 | 93.41911 | 93.46314 | 7.880465 | 1 |
| 12521 | ENSMUSG00000027215 | Cd82 | CD82 antigen | 3_prime_UTR_variant | 33 | chr2 | 93.41911 | 93.46314 | 7.880465 | 1 |
| 12521 | ENSMUSG00000027215 | Cd82 | CD82 antigen | downstream_gene_variant | 48 | chr2 | 93.41911 | 93.46314 | 7.880465 | 1 |
| 12521 | ENSMUSG00000027215 | Cd82 | CD82 antigen | non_coding_transcript_exon_variant | 30 | chr2 | 93.41911 | 93.46314 | 7.880465 | 1 |
| 12521 | ENSMUSG00000027215 | Cd82 | CD82 antigen | upstream_gene_variant | 1 | chr2 | 93.41911 | 93.46314 | 7.880465 | 1 |
| 12521 | ENSMUSG00000027215 | Cd82 | CD82 antigen | upstream_gene_variant | 29 | chr2 | 93.41911 | 93.46314 | 7.880465 | 1 |
| 12521 | ENSMUSG00000027215 | Cd82 | CD82 antigen | upstream_gene_variant | 5 | chr2 | 93.41911 | 93.46314 | 7.880465 | 1 |
| 12521 | ENSMUSG00000027215 | Cd82 | CD82 antigen | intron_variant | 1 | chr2 | 93.41911 | 93.46314 | 7.880465 | 1 |
| 12521 | ENSMUSG00000027215 | Cd82 | CD82 antigen | 5_prime_UTR_variant | 6 | chr2 | 93.41911 | 93.46314 | 7.880465 | 1 |
| 12521 | ENSMUSG00000027215 | Cd82 | CD82 antigen | non_coding_transcript_variant | 15 | chr2 | 93.41911 | 93.46314 | 7.880465 | 1 |
| 12521 | ENSMUSG00000027215 | Cd82 | CD82 antigen | synonymous_variant | 6 | chr2 | 93.41911 | 93.46314 | 7.880465 | 1 |
| 12521 | ENSMUSG00000027215 | Cd82 | CD82 antigen | downstream_gene_variant | 7 | chr2 | 93.41911 | 93.46314 | 7.880465 | 1 |
| 12521 | ENSMUSG00000027215 | Cd82 | CD82 antigen | intron_variant | 15 | chr2 | 93.41911 | 93.46314 | 7.880465 | 1 |
| 12953 | ENSMUSG00000068742 | Cry2 | cryptochrome 2 (photolyase-like) | splice_region_variant | 1 | chr2 | 92.40365 | 92.43404 | 5.414465 | 1 |
| 12953 | ENSMUSG00000068742 | Cry2 | cryptochrome 2 (photolyase-like) | non_coding_transcript_exon_variant | 5 | chr2 | 92.40365 | 92.43404 | 5.414465 | 1 |
| 12953 | ENSMUSG00000068742 | Cry2 | cryptochrome 2 (photolyase-like) | downstream_gene_variant | 29 | chr2 | 92.40365 | 92.43404 | 5.414465 | 1 |
| 12953 | ENSMUSG00000068742 | Cry2 | cryptochrome 2 (photolyase-like) | intron_variant | 50 | chr2 | 92.40365 | 92.43404 | 5.414465 | 1 |
| 12953 | ENSMUSG00000068742 | Cry2 | cryptochrome 2 (photolyase-like) | synonymous_variant | 9 | chr2 | 92.40365 | 92.43404 | 5.414465 | 1 |
| 12953 | ENSMUSG00000068742 | Cry2 | cryptochrome 2 (photolyase-like) | non_coding_transcript_exon_variant | 35 | chr2 | 92.40365 | 92.43404 | 5.414465 | 1 |
| 12953 | ENSMUSG00000068742 | Cry2 | cryptochrome 2 (photolyase-like) | 3_prime_UTR_variant | 28 | chr2 | 92.40365 | 92.43404 | 5.414465 | 1 |
| 12953 | ENSMUSG00000068742 | Cry2 | cryptochrome 2 (photolyase-like) | intron_variant | 25 | chr2 | 92.40365 | 92.43404 | 5.414465 | 1 |
| 12953 | ENSMUSG00000068742 | Cry2 | cryptochrome 2 (photolyase-like) | downstream_gene_variant | 1 | chr2 | 92.40365 | 92.43404 | 5.414465 | 1 |
| 12953 | ENSMUSG00000068742 | Cry2 | cryptochrome 2 (photolyase-like) | non_coding_transcript_variant | 8 | chr2 | 92.40365 | 92.43404 | 5.414465 | 1 |
| 12953 | ENSMUSG00000068742 | Cry2 | cryptochrome 2 (photolyase-like) | splice_donor_variant | 1 | chr2 | 92.40365 | 92.43404 | 5.414465 | 1 |
| 12953 | ENSMUSG00000068742 | Cry2 | cryptochrome 2 (photolyase-like) | non_coding_transcript_variant | 35 | chr2 | 92.40365 | 92.43404 | 5.414465 | 1 |
| 12953 | ENSMUSG00000068742 | Cry2 | cryptochrome 2 (photolyase-like) | downstream_gene_variant | 11 | chr2 | 92.40365 | 92.43404 | 5.414465 | 1 |
| 14043 | ENSMUSG00000027198 | Ext2 | exostosin glycosyltransferase 2 | intron_variant | 96 | chr2 | 93.66103 | 93.82257 | 6.503873 | 1 |
| 14043 | ENSMUSG00000027198 | Ext2 | exostosin glycosyltransferase 2 | synonymous_variant | 24 | chr2 | 93.66103 | 93.82257 | 6.503873 | 1 |
| 14043 | ENSMUSG00000027198 | Ext2 | exostosin glycosyltransferase 2 | upstream_gene_variant | 13 | chr2 | 93.66103 | 93.82257 | 6.503873 | 1 |
| 14043 | ENSMUSG00000027198 | Ext2 | exostosin glycosyltransferase 2 | 5_prime_UTR_variant | 16 | chr2 | 93.66103 | 93.82257 | 6.503873 | 1 |
| 14043 | ENSMUSG00000027198 | Ext2 | exostosin glycosyltransferase 2 | non_coding_transcript_variant | 81 | chr2 | 93.66103 | 93.82257 | 6.503873 | 1 |
| 14043 | ENSMUSG00000027198 | Ext2 | exostosin glycosyltransferase 2 | 3_prime_UTR_variant | 34 | chr2 | 93.66103 | 93.82257 | 6.503873 | 1 |
| 14043 | ENSMUSG00000027198 | Ext2 | exostosin glycosyltransferase 2 | missense_variant | 9 | chr2 | 93.66103 | 93.82257 | 6.503873 | 1 |
| 14043 | ENSMUSG00000027198 | Ext2 | exostosin glycosyltransferase 2 | non_coding_transcript_exon_variant | 70 | chr2 | 93.66103 | 93.82257 | 6.503873 | 1 |
| 14043 | ENSMUSG00000027198 | Ext2 | exostosin glycosyltransferase 2 | splice_region_variant | 2 | chr2 | 93.66103 | 93.82257 | 6.503873 | 1 |
| 14043 | ENSMUSG00000027198 | Ext2 | exostosin glycosyltransferase 2 | downstream_gene_variant | 21 | chr2 | 93.66103 | 93.82257 | 6.503873 | 1 |
| 14043 | ENSMUSG00000027198 | Ext2 | exostosin glycosyltransferase 2 | intron_variant | 56 | chr2 | 93.66103 | 93.82257 | 6.503873 | 1 |
| 14043 | ENSMUSG00000027198 | Ext2 | exostosin glycosyltransferase 2 | NMD_transcript_variant | 81 | chr2 | 93.66103 | 93.82257 | 6.503873 | 1 |
| 18633 | ENSMUSG00000027222 | Pex16 | peroxisomal biogenesis factor 16 | non_coding_transcript_variant | 2 | chr2 | 92.37468 | 92.38122 | 5.611072 | 1 |
| 18633 | ENSMUSG00000027222 | Pex16 | peroxisomal biogenesis factor 16 | non_coding_transcript_exon_variant | 10 | chr2 | 92.37468 | 92.38122 | 5.611072 | 1 |
| 18633 | ENSMUSG00000027222 | Pex16 | peroxisomal biogenesis factor 16 | synonymous_variant | 4 | chr2 | 92.37468 | 92.38122 | 5.611072 | 1 |
| 18633 | ENSMUSG00000027222 | Pex16 | peroxisomal biogenesis factor 16 | downstream_gene_variant | 1 | chr2 | 92.37468 | 92.38122 | 5.611072 | 1 |
| 18633 | ENSMUSG00000027222 | Pex16 | peroxisomal biogenesis factor 16 | 5_prime_UTR_variant | 5 | chr2 | 92.37468 | 92.38122 | 5.611072 | 1 |
| 18633 | ENSMUSG00000027222 | Pex16 | peroxisomal biogenesis factor 16 | upstream_gene_variant | 21 | chr2 | 92.37468 | 92.38122 | 5.611072 | 1 |
| 18633 | ENSMUSG00000027222 | Pex16 | peroxisomal biogenesis factor 16 | non_coding_transcript_exon_variant | 2 | chr2 | 92.37468 | 92.38122 | 5.611072 | 1 |
| 18633 | ENSMUSG00000027222 | Pex16 | peroxisomal biogenesis factor 16 | downstream_gene_variant | 12 | chr2 | 92.37468 | 92.38122 | 5.611072 | 1 |
| 18633 | ENSMUSG00000027222 | Pex16 | peroxisomal biogenesis factor 16 | downstream_gene_variant | 4 | chr2 | 92.37468 | 92.38122 | 5.611072 | 1 |
| 18633 | ENSMUSG00000027222 | Pex16 | peroxisomal biogenesis factor 16 | non_coding_transcript_variant | 13 | chr2 | 92.37468 | 92.38122 | 5.611072 | 1 |
| 18633 | ENSMUSG00000027222 | Pex16 | peroxisomal biogenesis factor 16 | upstream_gene_variant | 7 | chr2 | 92.37468 | 92.38122 | 5.611072 | 1 |
| 18633 | ENSMUSG00000027222 | Pex16 | peroxisomal biogenesis factor 16 | intron_variant | 10 | chr2 | 92.37468 | 92.38122 | 5.611072 | 1 |
| 19099 | ENSMUSG00000027223 | Mapk8ip1 | mitogen-activated protein kinase 8 interacting protein 1 | downstream_gene_variant | 4 | chr2 | 92.38368 | 92.40126 | 4.658783 | 1 |
| 19099 | ENSMUSG00000027223 | Mapk8ip1 | mitogen-activated protein kinase 8 interacting protein 1 | intron_variant | 4 | chr2 | 92.38368 | 92.40126 | 4.658783 | 1 |
| 19099 | ENSMUSG00000027223 | Mapk8ip1 | mitogen-activated protein kinase 8 interacting protein 1 | intron_variant | 1 | chr2 | 92.38368 | 92.40126 | 4.658783 | 1 |
| 19099 | ENSMUSG00000027223 | Mapk8ip1 | mitogen-activated protein kinase 8 interacting protein 1 | 5_prime_UTR_variant | 2 | chr2 | 92.38368 | 92.40126 | 4.658783 | 1 |
| 19099 | ENSMUSG00000027223 | Mapk8ip1 | mitogen-activated protein kinase 8 interacting protein 1 | downstream_gene_variant | 7 | chr2 | 92.38368 | 92.40126 | 4.658783 | 1 |
| 19099 | ENSMUSG00000027223 | Mapk8ip1 | mitogen-activated protein kinase 8 interacting protein 1 | upstream_gene_variant | 13 | chr2 | 92.38368 | 92.40126 | 4.658783 | 1 |
| 19099 | ENSMUSG00000027223 | Mapk8ip1 | mitogen-activated protein kinase 8 interacting protein 1 | missense_variant | 2 | chr2 | 92.38368 | 92.40126 | 4.658783 | 1 |
| 19099 | ENSMUSG00000027223 | Mapk8ip1 | mitogen-activated protein kinase 8 interacting protein 1 | 3_prime_UTR_variant | 10 | chr2 | 92.38368 | 92.40126 | 4.658783 | 1 |
| 19099 | ENSMUSG00000027223 | Mapk8ip1 | mitogen-activated protein kinase 8 interacting protein 1 | non_coding_transcript_exon_variant | 15 | chr2 | 92.38368 | 92.40126 | 4.658783 | 1 |
| 19099 | ENSMUSG00000027223 | Mapk8ip1 | mitogen-activated protein kinase 8 interacting protein 1 | non_coding_transcript_variant | 15 | chr2 | 92.38368 | 92.40126 | 4.658783 | 1 |
| 19099 | ENSMUSG00000027223 | Mapk8ip1 | mitogen-activated protein kinase 8 interacting protein 1 | downstream_gene_variant | 1 | chr2 | 92.38368 | 92.40126 | 4.658783 | 1 |
| 19099 | ENSMUSG00000027223 | Mapk8ip1 | mitogen-activated protein kinase 8 interacting protein 1 | intron_variant | 13 | chr2 | 92.38368 | 92.40126 | 4.658783 | 1 |
| 19099 | ENSMUSG00000027223 | Mapk8ip1 | mitogen-activated protein kinase 8 interacting protein 1 | synonymous_variant | 8 | chr2 | 92.38368 | 92.40126 | 4.658783 | 1 |
| 192285 | ENSMUSG00000058318 | Phf21a | PHD finger protein 21A | missense_variant | 5 | chr2 | 92.09312 | 92.36467 | 6.417169 | 1 |
| 192285 | ENSMUSG00000058318 | Phf21a | PHD finger protein 21A | intron_variant | 7 | chr2 | 92.09312 | 92.36467 | 6.417169 | 1 |
| 192285 | ENSMUSG00000058318 | Phf21a | PHD finger protein 21A | non_coding_transcript_exon_variant | 7 | chr2 | 92.09312 | 92.36467 | 6.417169 | 1 |
| 192285 | ENSMUSG00000058318 | Phf21a | PHD finger protein 21A | downstream_gene_variant | 90 | chr2 | 92.09312 | 92.36467 | 6.417169 | 1 |
| 192285 | ENSMUSG00000058318 | Phf21a | PHD finger protein 21A | synonymous_variant | 12 | chr2 | 92.09312 | 92.36467 | 6.417169 | 1 |
| 192285 | ENSMUSG00000058318 | Phf21a | PHD finger protein 21A | non_coding_transcript_variant | 7 | chr2 | 92.09312 | 92.36467 | 6.417169 | 1 |
| 192285 | ENSMUSG00000058318 | Phf21a | PHD finger protein 21A | downstream_gene_variant | 60 | chr2 | 92.09312 | 92.36467 | 6.417169 | 1 |
| 192285 | ENSMUSG00000058318 | Phf21a | PHD finger protein 21A | 3_prime_UTR_variant | 45 | chr2 | 92.09312 | 92.36467 | 6.417169 | 1 |
| 192285 | ENSMUSG00000058318 | Phf21a | PHD finger protein 21A | upstream_gene_variant | 5 | chr2 | 92.09312 | 92.36467 | 6.417169 | 1 |
| 192285 | ENSMUSG00000058318 | Phf21a | PHD finger protein 21A | 5_prime_UTR_variant | 2 | chr2 | 92.09312 | 92.36467 | 6.417169 | 1 |
| 228366 | ENSMUSG00000040434 | Large2 | LARGE xylosyl- and glucuronyltransferase 2 | upstream_gene_variant | 71 | chr2 | 92.36505 | 92.37487 | 4.660140 | 1 |
| 228366 | ENSMUSG00000040434 | Large2 | LARGE xylosyl- and glucuronyltransferase 2 | 5_prime_UTR_variant | 2 | chr2 | 92.36505 | 92.37487 | 4.660140 | 1 |
| 228366 | ENSMUSG00000040434 | Large2 | LARGE xylosyl- and glucuronyltransferase 2 | downstream_gene_variant | 92 | chr2 | 92.36505 | 92.37487 | 4.660140 | 1 |
| 228366 | ENSMUSG00000040434 | Large2 | LARGE xylosyl- and glucuronyltransferase 2 | 5_prime_UTR_variant | 2 | chr2 | 92.36505 | 92.37487 | 4.660140 | 1 |
| 228366 | ENSMUSG00000040434 | Large2 | LARGE xylosyl- and glucuronyltransferase 2 | upstream_gene_variant | 13 | chr2 | 92.36505 | 92.37487 | 4.660140 | 1 |
| 228366 | ENSMUSG00000040434 | Large2 | LARGE xylosyl- and glucuronyltransferase 2 | 3_prime_UTR_variant | 55 | chr2 | 92.36505 | 92.37487 | 4.660140 | 1 |
| 228366 | ENSMUSG00000040434 | Large2 | LARGE xylosyl- and glucuronyltransferase 2 | synonymous_variant | 33 | chr2 | 92.36505 | 92.37487 | 4.660140 | 1 |
| 228366 | ENSMUSG00000040434 | Large2 | LARGE xylosyl- and glucuronyltransferase 2 | NMD_transcript_variant | 109 | chr2 | 92.36505 | 92.37487 | 4.660140 | 1 |
| 228366 | ENSMUSG00000040434 | Large2 | LARGE xylosyl- and glucuronyltransferase 2 | non_coding_transcript_exon_variant | 109 | chr2 | 92.36505 | 92.37487 | 4.660140 | 1 |
| 228366 | ENSMUSG00000040434 | Large2 | LARGE xylosyl- and glucuronyltransferase 2 | non_coding_transcript_variant | 109 | chr2 | 92.36505 | 92.37487 | 4.660140 | 1 |
| 228366 | ENSMUSG00000040434 | Large2 | LARGE xylosyl- and glucuronyltransferase 2 | downstream_gene_variant | 51 | chr2 | 92.36505 | 92.37487 | 4.660140 | 1 |
| 228366 | ENSMUSG00000040434 | Large2 | LARGE xylosyl- and glucuronyltransferase 2 | intron_variant | 53 | chr2 | 92.36505 | 92.37487 | 4.660140 | 1 |
| 228366 | ENSMUSG00000040434 | Large2 | LARGE xylosyl- and glucuronyltransferase 2 | missense_variant | 12 | chr2 | 92.36505 | 92.37487 | 4.660140 | 1 |
| 228368 | ENSMUSG00000049922 | Slc35c1 | solute carrier family 35, member C1 | downstream_gene_variant | 14 | chr2 | 92.45276 | 92.46054 | 5.004764 | 1 |
| 228368 | ENSMUSG00000049922 | Slc35c1 | solute carrier family 35, member C1 | upstream_gene_variant | 2 | chr2 | 92.45276 | 92.46054 | 5.004764 | 1 |
| 228368 | ENSMUSG00000049922 | Slc35c1 | solute carrier family 35, member C1 | 3_prime_UTR_variant | 40 | chr2 | 92.45276 | 92.46054 | 5.004764 | 1 |
| 228368 | ENSMUSG00000049922 | Slc35c1 | solute carrier family 35, member C1 | intron_variant | 7 | chr2 | 92.45276 | 92.46054 | 5.004764 | 1 |
| 228368 | ENSMUSG00000049922 | Slc35c1 | solute carrier family 35, member C1 | missense_variant | 2 | chr2 | 92.45276 | 92.46054 | 5.004764 | 1 |
| 228368 | ENSMUSG00000049922 | Slc35c1 | solute carrier family 35, member C1 | synonymous_variant | 7 | chr2 | 92.45276 | 92.46054 | 5.004764 | 1 |
| 228368 | ENSMUSG00000049922 | Slc35c1 | solute carrier family 35, member C1 | 5_prime_UTR_variant | 8 | chr2 | 92.45276 | 92.46054 | 5.004764 | 1 |
| 241556 | ENSMUSG00000027217 | Tspan18 | tetraspanin 18 | synonymous_variant | 4 | chr2 | 93.20176 | 93.33450 | 7.434495 | 1 |
| 241556 | ENSMUSG00000027217 | Tspan18 | tetraspanin 18 | 3_prime_UTR_variant | 9 | chr2 | 93.20176 | 93.33450 | 7.434495 | 1 |
| 241556 | ENSMUSG00000027217 | Tspan18 | tetraspanin 18 | downstream_gene_variant | 7 | chr2 | 93.20176 | 93.33450 | 7.434495 | 1 |
| 241556 | ENSMUSG00000027217 | Tspan18 | tetraspanin 18 | 5_prime_UTR_variant | 4 | chr2 | 93.20176 | 93.33450 | 7.434495 | 1 |
| 241556 | ENSMUSG00000027217 | Tspan18 | tetraspanin 18 | intron_variant | 65 | chr2 | 93.20176 | 93.33450 | 7.434495 | 1 |
| 241556 | ENSMUSG00000027217 | Tspan18 | tetraspanin 18 | downstream_gene_variant | 36 | chr2 | 93.20176 | 93.33450 | 7.434495 | 1 |
| 241556 | ENSMUSG00000027217 | Tspan18 | tetraspanin 18 | non_coding_transcript_exon_variant | 66 | chr2 | 93.20176 | 93.33450 | 7.434495 | 1 |
| 241556 | ENSMUSG00000027217 | Tspan18 | tetraspanin 18 | non_coding_transcript_variant | 66 | chr2 | 93.20176 | 93.33450 | 7.434495 | 1 |
| 277414 | ENSMUSG00000068735 | Trp53i11 | transformation related protein 53 inducible protein 11 | upstream_gene_variant | 7 | chr2 | 93.18755 | 93.20176 | 7.563076 | 1 |
| 277414 | ENSMUSG00000068735 | Trp53i11 | transformation related protein 53 inducible protein 11 | 5_prime_UTR_variant | 4 | chr2 | 93.18755 | 93.20176 | 7.563076 | 1 |
| 277414 | ENSMUSG00000068735 | Trp53i11 | transformation related protein 53 inducible protein 11 | non_coding_transcript_exon_variant | 43 | chr2 | 93.18755 | 93.20176 | 7.563076 | 1 |
| 277414 | ENSMUSG00000068735 | Trp53i11 | transformation related protein 53 inducible protein 11 | non_coding_transcript_variant | 43 | chr2 | 93.18755 | 93.20176 | 7.563076 | 1 |
| 277414 | ENSMUSG00000068735 | Trp53i11 | transformation related protein 53 inducible protein 11 | downstream_gene_variant | 9 | chr2 | 93.18755 | 93.20176 | 7.563076 | 1 |
| 277414 | ENSMUSG00000068735 | Trp53i11 | transformation related protein 53 inducible protein 11 | downstream_gene_variant | 33 | chr2 | 93.18755 | 93.20176 | 7.563076 | 1 |
| 277414 | ENSMUSG00000068735 | Trp53i11 | transformation related protein 53 inducible protein 11 | intron_variant | 5 | chr2 | 93.18755 | 93.20176 | 7.563076 | 1 |
| 277414 | ENSMUSG00000068735 | Trp53i11 | transformation related protein 53 inducible protein 11 | synonymous_variant | 3 | chr2 | 93.18755 | 93.20176 | 7.563076 | 1 |
| 277414 | ENSMUSG00000068735 | Trp53i11 | transformation related protein 53 inducible protein 11 | 3_prime_UTR_variant | 31 | chr2 | 93.18755 | 93.20176 | 7.563076 | 1 |
| 320507 | ENSMUSG00000084781 | D930015M05Rik | RIKEN cDNA D930015M05 gene | non_coding_transcript_exon_variant | 5 | chr2 | 92.40889 | 92.43231 | 4.566513 | 1 |
| 320507 | ENSMUSG00000084781 | D930015M05Rik | RIKEN cDNA D930015M05 gene | non_coding_transcript_variant | 57 | chr2 | 92.40889 | 92.43231 | 4.566513 | 1 |
| 320507 | ENSMUSG00000084781 | D930015M05Rik | RIKEN cDNA D930015M05 gene | non_coding_transcript_exon_variant | 25 | chr2 | 92.40889 | 92.43231 | 4.566513 | 1 |
| 320507 | ENSMUSG00000084781 | D930015M05Rik | RIKEN cDNA D930015M05 gene | non_coding_transcript_variant | 25 | chr2 | 92.40889 | 92.43231 | 4.566513 | 1 |
| 320507 | ENSMUSG00000084781 | D930015M05Rik | RIKEN cDNA D930015M05 gene | downstream_gene_variant | 2 | chr2 | 92.40889 | 92.43231 | 4.566513 | 1 |
| 320507 | ENSMUSG00000084781 | D930015M05Rik | RIKEN cDNA D930015M05 gene | intron_variant | 52 | chr2 | 92.40889 | 92.43231 | 4.566513 | 1 |
| 320507 | ENSMUSG00000084781 | D930015M05Rik | RIKEN cDNA D930015M05 gene | upstream_gene_variant | 13 | chr2 | 92.40889 | 92.43231 | 4.566513 | 1 |
| 329470 | ENSMUSG00000040272 | Accs | 1-aminocyclopropane-1-carboxylate synthase (non-functional) | 3_prime_UTR_variant | 38 | chr2 | 93.83347 | 93.84994 | 4.470428 | 1 |
| 329470 | ENSMUSG00000040272 | Accs | 1-aminocyclopropane-1-carboxylate synthase (non-functional) | non_coding_transcript_variant | 169 | chr2 | 93.83347 | 93.84994 | 4.470428 | 1 |
| 329470 | ENSMUSG00000040272 | Accs | 1-aminocyclopropane-1-carboxylate synthase (non-functional) | downstream_gene_variant | 148 | chr2 | 93.83347 | 93.84994 | 4.470428 | 1 |
| 329470 | ENSMUSG00000040272 | Accs | 1-aminocyclopropane-1-carboxylate synthase (non-functional) | synonymous_variant | 36 | chr2 | 93.83347 | 93.84994 | 4.470428 | 1 |
| 329470 | ENSMUSG00000040272 | Accs | 1-aminocyclopropane-1-carboxylate synthase (non-functional) | non_coding_transcript_exon_variant | 157 | chr2 | 93.83347 | 93.84994 | 4.470428 | 1 |
| 329470 | ENSMUSG00000040272 | Accs | 1-aminocyclopropane-1-carboxylate synthase (non-functional) | upstream_gene_variant | 132 | chr2 | 93.83347 | 93.84994 | 4.470428 | 1 |
| 329470 | ENSMUSG00000040272 | Accs | 1-aminocyclopropane-1-carboxylate synthase (non-functional) | missense_variant | 16 | chr2 | 93.83347 | 93.84994 | 4.470428 | 1 |
| 329470 | ENSMUSG00000040272 | Accs | 1-aminocyclopropane-1-carboxylate synthase (non-functional) | intron_variant | 110 | chr2 | 93.83347 | 93.84994 | 4.470428 | 1 |
| 329470 | ENSMUSG00000040272 | Accs | 1-aminocyclopropane-1-carboxylate synthase (non-functional) | NMD_transcript_variant | 96 | chr2 | 93.83347 | 93.84994 | 4.470428 | 1 |
| 329470 | ENSMUSG00000040272 | Accs | 1-aminocyclopropane-1-carboxylate synthase (non-functional) | splice_region_variant | 6 | chr2 | 93.83347 | 93.84994 | 4.470428 | 1 |
| 329470 | ENSMUSG00000040272 | Accs | 1-aminocyclopropane-1-carboxylate synthase (non-functional) | 5_prime_UTR_variant | 22 | chr2 | 93.83347 | 93.84994 | 4.470428 | 1 |
| 381411 | ENSMUSG00000075023 | Accsl | 1-aminocyclopropane-1-carboxylate synthase (non-functional)-like | non_coding_transcript_exon_variant | 48 | chr2 | 93.85536 | 93.86916 | 2.830584 | 1 |
| 381411 | ENSMUSG00000075023 | Accsl | 1-aminocyclopropane-1-carboxylate synthase (non-functional)-like | 3_prime_UTR_variant | 6 | chr2 | 93.85536 | 93.86916 | 2.830584 | 1 |
| 381411 | ENSMUSG00000075023 | Accsl | 1-aminocyclopropane-1-carboxylate synthase (non-functional)-like | missense_variant | 8 | chr2 | 93.85536 | 93.86916 | 2.830584 | 1 |
| 381411 | ENSMUSG00000075023 | Accsl | 1-aminocyclopropane-1-carboxylate synthase (non-functional)-like | upstream_gene_variant | 43 | chr2 | 93.85536 | 93.86916 | 2.830584 | 1 |
| 381411 | ENSMUSG00000075023 | Accsl | 1-aminocyclopropane-1-carboxylate synthase (non-functional)-like | non_coding_transcript_variant | 54 | chr2 | 93.85536 | 93.86916 | 2.830584 | 1 |
| 381411 | ENSMUSG00000075023 | Accsl | 1-aminocyclopropane-1-carboxylate synthase (non-functional)-like | downstream_gene_variant | 18 | chr2 | 93.85536 | 93.86916 | 2.830584 | 1 |
| 381411 | ENSMUSG00000075023 | Accsl | 1-aminocyclopropane-1-carboxylate synthase (non-functional)-like | synonymous_variant | 16 | chr2 | 93.85536 | 93.86916 | 2.830584 | 1 |
| 381411 | ENSMUSG00000075023 | Accsl | 1-aminocyclopropane-1-carboxylate synthase (non-functional)-like | initiator_codon_variant | 6 | chr2 | 93.85536 | 93.86916 | 2.830584 | 1 |
| 381411 | ENSMUSG00000075023 | Accsl | 1-aminocyclopropane-1-carboxylate synthase (non-functional)-like | splice_region_variant | 3 | chr2 | 93.85536 | 93.86916 | 2.830584 | 1 |
| 381411 | ENSMUSG00000075023 | Accsl | 1-aminocyclopropane-1-carboxylate synthase (non-functional)-like | intron_variant | 36 | chr2 | 93.85536 | 93.86916 | 2.830584 | 1 |
| 381411 | ENSMUSG00000075023 | Accsl | 1-aminocyclopropane-1-carboxylate synthase (non-functional)-like | 5_prime_UTR_variant | 16 | chr2 | 93.85536 | 93.86916 | 2.830584 | 1 |
| 433456 | ENSMUSG00000075027 | 4631405J19Rik | RIKEN cDNA 4631405J19 gene | non_coding_transcript_exon_variant | 88 | chr2 | 93.02796 | 93.04473 | 3.977306 | 1 |
| 433456 | ENSMUSG00000075027 | 4631405J19Rik | RIKEN cDNA 4631405J19 gene | upstream_gene_variant | 39 | chr2 | 93.02796 | 93.04473 | 3.977306 | 1 |
| 433456 | ENSMUSG00000075027 | 4631405J19Rik | RIKEN cDNA 4631405J19 gene | downstream_gene_variant | 3 | chr2 | 93.02796 | 93.04473 | 3.977306 | 1 |
| 433456 | ENSMUSG00000075027 | 4631405J19Rik | RIKEN cDNA 4631405J19 gene | downstream_gene_variant | 13 | chr2 | 93.02796 | 93.04473 | 3.977306 | 1 |
| 433456 | ENSMUSG00000075027 | 4631405J19Rik | RIKEN cDNA 4631405J19 gene | non_coding_transcript_variant | 88 | chr2 | 93.02796 | 93.04473 | 3.977306 | 1 |
| 433456 | ENSMUSG00000075027 | 4631405J19Rik | RIKEN cDNA 4631405J19 gene | intron_variant | 25 | chr2 | 93.02796 | 93.04473 | 3.977306 | 1 |
| 56348 | ENSMUSG00000027195 | Hsd17b12 | hydroxysteroid (17-beta) dehydrogenase 12 | 3_prime_UTR_variant | 44 | chr2 | 94.03269 | 94.15796 | 7.309973 | 1 |
| 56348 | ENSMUSG00000027195 | Hsd17b12 | hydroxysteroid (17-beta) dehydrogenase 12 | downstream_gene_variant | 44 | chr2 | 94.03269 | 94.15796 | 7.309973 | 1 |
| 56348 | ENSMUSG00000027195 | Hsd17b12 | hydroxysteroid (17-beta) dehydrogenase 12 | missense_variant | 7 | chr2 | 94.03269 | 94.15796 | 7.309973 | 1 |
| 56348 | ENSMUSG00000027195 | Hsd17b12 | hydroxysteroid (17-beta) dehydrogenase 12 | non_coding_transcript_exon_variant | 62 | chr2 | 94.03269 | 94.15796 | 7.309973 | 1 |
| 56348 | ENSMUSG00000027195 | Hsd17b12 | hydroxysteroid (17-beta) dehydrogenase 12 | non_coding_transcript_variant | 62 | chr2 | 94.03269 | 94.15796 | 7.309973 | 1 |
| 56348 | ENSMUSG00000027195 | Hsd17b12 | hydroxysteroid (17-beta) dehydrogenase 12 | synonymous_variant | 4 | chr2 | 94.03269 | 94.15796 | 7.309973 | 1 |
| 56348 | ENSMUSG00000027195 | Hsd17b12 | hydroxysteroid (17-beta) dehydrogenase 12 | intron_variant | 9 | chr2 | 94.03269 | 94.15796 | 7.309973 | 1 |
| 56348 | ENSMUSG00000027195 | Hsd17b12 | hydroxysteroid (17-beta) dehydrogenase 12 | upstream_gene_variant | 1 | chr2 | 94.03269 | 94.15796 | 7.309973 | 1 |
| 620695 | ENSMUSG00000087006 | Gm13889 | predicted gene 13889 | synonymous_variant | 4 | chr2 | 93.95581 | 93.95720 | 5.763328 | 1 |
| 620695 | ENSMUSG00000087006 | Gm13889 | predicted gene 13889 | 3_prime_UTR_variant | 6 | chr2 | 93.95581 | 93.95720 | 5.763328 | 1 |
| 620695 | ENSMUSG00000087006 | Gm13889 | predicted gene 13889 | 5_prime_UTR_variant | 1 | chr2 | 93.95581 | 93.95720 | 5.763328 | 1 |
| 620695 | ENSMUSG00000087006 | Gm13889 | predicted gene 13889 | upstream_gene_variant | 1 | chr2 | 93.95581 | 93.95720 | 5.763328 | 1 |
| 620695 | ENSMUSG00000087006 | Gm13889 | predicted gene 13889 | missense_variant | 2 | chr2 | 93.95581 | 93.95720 | 5.763328 | 1 |
| 620695 | ENSMUSG00000087006 | Gm13889 | predicted gene 13889 | upstream_gene_variant | 3 | chr2 | 93.95581 | 93.95720 | 5.763328 | 1 |
| 639658 | ENSMUSG00000085852 | Gm13807 | predicted gene 13807 | non_coding_transcript_variant | 9 | chr2 | 93.40355 | 93.41783 | 4.489932 | 1 |
| 639658 | ENSMUSG00000085852 | Gm13807 | predicted gene 13807 | non_coding_transcript_exon_variant | 9 | chr2 | 93.40355 | 93.41783 | 4.489932 | 1 |
| 639658 | ENSMUSG00000085852 | Gm13807 | predicted gene 13807 | downstream_gene_variant | 1 | chr2 | 93.40355 | 93.41783 | 4.489932 | 1 |
| 639658 | ENSMUSG00000085852 | Gm13807 | predicted gene 13807 | downstream_gene_variant | 40 | chr2 | 93.40355 | 93.41783 | 4.489932 | 1 |
| 69113 | ENSMUSG00000040174 | Alkbh3 | alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase | non_coding_transcript_exon_variant | 2 | chr2 | 93.95682 | 94.01081 | 6.680112 | 1 |
| 69113 | ENSMUSG00000040174 | Alkbh3 | alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase | non_coding_transcript_variant | 17 | chr2 | 93.95682 | 94.01081 | 6.680112 | 1 |
| 69113 | ENSMUSG00000040174 | Alkbh3 | alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase | downstream_gene_variant | 8 | chr2 | 93.95682 | 94.01081 | 6.680112 | 1 |
| 69113 | ENSMUSG00000040174 | Alkbh3 | alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase | upstream_gene_variant | 14 | chr2 | 93.95682 | 94.01081 | 6.680112 | 1 |
| 69113 | ENSMUSG00000040174 | Alkbh3 | alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase | 3_prime_UTR_variant | 2 | chr2 | 93.95682 | 94.01081 | 6.680112 | 1 |
| 69113 | ENSMUSG00000040174 | Alkbh3 | alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase | intron_variant | 15 | chr2 | 93.95682 | 94.01081 | 6.680112 | 1 |
| 69113 | ENSMUSG00000040174 | Alkbh3 | alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase | 3_prime_UTR_variant | 15 | chr2 | 93.95682 | 94.01081 | 6.680112 | 1 |
| 69113 | ENSMUSG00000040174 | Alkbh3 | alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase | downstream_gene_variant | 22 | chr2 | 93.95682 | 94.01081 | 6.680112 | 1 |
| 69113 | ENSMUSG00000040174 | Alkbh3 | alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase | intron_variant | 23 | chr2 | 93.95682 | 94.01081 | 6.680112 | 1 |
| 69113 | ENSMUSG00000040174 | Alkbh3 | alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase | upstream_gene_variant | 23 | chr2 | 93.95682 | 94.01081 | 6.680112 | 1 |
| 69113 | ENSMUSG00000040174 | Alkbh3 | alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase | non_coding_transcript_exon_variant | 45 | chr2 | 93.95682 | 94.01081 | 6.680112 | 1 |
| 69113 | ENSMUSG00000040174 | Alkbh3 | alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase | 5_prime_UTR_variant | 7 | chr2 | 93.95682 | 94.01081 | 6.680112 | 1 |
| 69113 | ENSMUSG00000040174 | Alkbh3 | alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase | synonymous_variant | 8 | chr2 | 93.95682 | 94.01081 | 6.680112 | 1 |
| 69113 | ENSMUSG00000040174 | Alkbh3 | alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase | non_coding_transcript_variant | 45 | chr2 | 93.95682 | 94.01081 | 6.680112 | 1 |
| 70852 | ENSMUSG00000027196 | Alkbh3os1 | alkB homolog 3, opposite strand 1 | intron_variant | 12 | chr2 | 93.98003 | 93.98358 | 2.717360 | 1 |
| 70852 | ENSMUSG00000027196 | Alkbh3os1 | alkB homolog 3, opposite strand 1 | non_coding_transcript_exon_variant | 23 | chr2 | 93.98003 | 93.98358 | 2.717360 | 1 |
| 70852 | ENSMUSG00000027196 | Alkbh3os1 | alkB homolog 3, opposite strand 1 | downstream_gene_variant | 4 | chr2 | 93.98003 | 93.98358 | 2.717360 | 1 |
| 70852 | ENSMUSG00000027196 | Alkbh3os1 | alkB homolog 3, opposite strand 1 | non_coding_transcript_exon_variant | 3 | chr2 | 93.98003 | 93.98358 | 2.717360 | 1 |
| 70852 | ENSMUSG00000027196 | Alkbh3os1 | alkB homolog 3, opposite strand 1 | non_coding_transcript_variant | 23 | chr2 | 93.98003 | 93.98358 | 2.717360 | 1 |
| 70852 | ENSMUSG00000027196 | Alkbh3os1 | alkB homolog 3, opposite strand 1 | non_coding_transcript_variant | 15 | chr2 | 93.98003 | 93.98358 | 2.717360 | 1 |
| 723953 | ENSMUSG00000065511 | Mir129-2 | microRNA 129-2 | non_coding_transcript_exon_variant | 1 | chr2 | 94.24136 | 94.24145 | 2.105493 | 1 |
| 723953 | ENSMUSG00000065511 | Mir129-2 | microRNA 129-2 | non_coding_transcript_variant | 1 | chr2 | 94.24136 | 94.24145 | 2.105493 | 1 |
| 75641 | ENSMUSG00000044916 | 1700029I15Rik | RIKEN cDNA 1700029I15 gene | upstream_gene_variant | 1 | chr2 | 92.38292 | 92.38571 | 4.740904 | 1 |
| 75641 | ENSMUSG00000044916 | 1700029I15Rik | RIKEN cDNA 1700029I15 gene | downstream_gene_variant | 4 | chr2 | 92.38292 | 92.38571 | 4.740904 | 1 |
| 75641 | ENSMUSG00000044916 | 1700029I15Rik | RIKEN cDNA 1700029I15 gene | downstream_gene_variant | 1 | chr2 | 92.38292 | 92.38571 | 4.740904 | 1 |
| 75641 | ENSMUSG00000044916 | 1700029I15Rik | RIKEN cDNA 1700029I15 gene | 3_prime_UTR_variant | 4 | chr2 | 92.38292 | 92.38571 | 4.740904 | 1 |
| 75641 | ENSMUSG00000044916 | 1700029I15Rik | RIKEN cDNA 1700029I15 gene | downstream_gene_variant | 26 | chr2 | 92.38292 | 92.38571 | 4.740904 | 1 |
| 75641 | ENSMUSG00000044916 | 1700029I15Rik | RIKEN cDNA 1700029I15 gene | intron_variant | 10 | chr2 | 92.38292 | 92.38571 | 4.740904 | 1 |
| 76969 | ENSMUSG00000027221 | Chst1 | carbohydrate sulfotransferase 1 | 3_prime_UTR_variant | 8 | chr2 | 92.59971 | 92.61525 | 4.787893 | 1 |
| 76969 | ENSMUSG00000027221 | Chst1 | carbohydrate sulfotransferase 1 | synonymous_variant | 6 | chr2 | 92.59971 | 92.61525 | 4.787893 | 1 |
| 76969 | ENSMUSG00000027221 | Chst1 | carbohydrate sulfotransferase 1 | 5_prime_UTR_variant | 2 | chr2 | 92.59971 | 92.61525 | 4.787893 | 1 |
| 80976 | ENSMUSG00000027220 | Syt13 | synaptotagmin XIII | 3_prime_UTR_variant | 39 | chr2 | 92.91510 | 92.95606 | 5.012868 | 1 |
| 80976 | ENSMUSG00000027220 | Syt13 | synaptotagmin XIII | synonymous_variant | 3 | chr2 | 92.91510 | 92.95606 | 5.012868 | 1 |
| 80976 | ENSMUSG00000027220 | Syt13 | synaptotagmin XIII | missense_variant | 1 | chr2 | 92.91510 | 92.95606 | 5.012868 | 1 |
For each QTL peak with a LOD > 7.7, we searched for colocated QTL for other phenotypes with LOD >= 6.0.
| Phenotype | Chr | Pos | LOD | CI low | CI high |
|---|---|---|---|---|---|
| mtb_burden | 3 | 92.81493 | 6.490463 | 87.81493 | 97.81493 |
| lung_s100a8 | 3 | 90.74194 | 18.557481 | 90.52078 | 91.97561 |
The lung S100a8 QTL on Chr 3 is colocated with one other QTL for lung: Mtb Burden.
It’s difficult to say if these are the same peak. WSB and PWK are los in both plots, but the M.tb peak has a much lower LOD and less separattion of the effects.
Below is the association mapping plot for lung S100a8.
There are 14 unique genes in the QTL interval. We measured expression for 14 of these genes.
Plot a histogram of the correlations.
The correlations are all distributed oddly, with a strange spike between 0.2 and 0.4. Plot the gene with the highest correlation vs. the phenotype, colored by DO generation.
Produce a list of genes with mean expression and correlation p-values.
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
| entrez | ensembl | symbol | genename | consequence | num_snps | chr | start | end | mean_expr | bonf.p.value |
|---|---|---|---|---|---|---|---|---|---|---|
| 20196 | ENSMUSG00000042312 | S100a13 | S100 calcium binding protein A13 | synonymous_variant | 2 | chr3 | 90.51444 | 90.52458 | 6.326419 | 0.0000280 |
| 20196 | ENSMUSG00000042312 | S100a13 | S100 calcium binding protein A13 | downstream_gene_variant | 6 | chr3 | 90.51444 | 90.52458 | 6.326419 | 0.0000280 |
| 20196 | ENSMUSG00000042312 | S100a13 | S100 calcium binding protein A13 | missense_variant | 1 | chr3 | 90.51444 | 90.52458 | 6.326419 | 0.0000280 |
| 20196 | ENSMUSG00000042312 | S100a13 | S100 calcium binding protein A13 | 3_prime_UTR_variant | 1 | chr3 | 90.51444 | 90.52458 | 6.326419 | 0.0000280 |
| 20197 | ENSMUSG00000001021 | S100a3 | S100 calcium binding protein A3 | 3_prime_UTR_variant | 10 | chr3 | 90.58466 | 90.60270 | 3.949224 | 0.0078416 |
| 20197 | ENSMUSG00000001021 | S100a3 | S100 calcium binding protein A3 | 5_prime_UTR_variant | 1 | chr3 | 90.58466 | 90.60270 | 3.949224 | 0.0078416 |
| 20197 | ENSMUSG00000001021 | S100a3 | S100 calcium binding protein A3 | downstream_gene_variant | 2 | chr3 | 90.58466 | 90.60270 | 3.949224 | 0.0078416 |
| 20198 | ENSMUSG00000001020 | S100a4 | S100 calcium binding protein A4 | upstream_gene_variant | 11 | chr3 | 90.60190 | 90.60604 | 5.971901 | 0.1683160 |
| 20198 | ENSMUSG00000001020 | S100a4 | S100 calcium binding protein A4 | downstream_gene_variant | 2 | chr3 | 90.60190 | 90.60604 | 5.971901 | 0.1683160 |
| 20198 | ENSMUSG00000001020 | S100a4 | S100 calcium binding protein A4 | 3_prime_UTR_variant | 2 | chr3 | 90.60190 | 90.60604 | 5.971901 | 0.1683160 |
| 20198 | ENSMUSG00000001020 | S100a4 | S100 calcium binding protein A4 | downstream_gene_variant | 2 | chr3 | 90.60190 | 90.60604 | 5.971901 | 0.1683160 |
| 20199 | ENSMUSG00000001023 | S100a5 | S100 calcium binding protein A5 | upstream_gene_variant | 2 | chr3 | 90.60852 | 90.61178 | 2.354976 | 0.3948673 |
| 20199 | ENSMUSG00000001023 | S100a5 | S100 calcium binding protein A5 | 5_prime_UTR_variant | 2 | chr3 | 90.60852 | 90.61178 | 2.354976 | 0.3948673 |
| 20199 | ENSMUSG00000001023 | S100a5 | S100 calcium binding protein A5 | 3_prime_UTR_variant | 2 | chr3 | 90.60852 | 90.61178 | 2.354976 | 0.3948673 |
| 20199 | ENSMUSG00000001023 | S100a5 | S100 calcium binding protein A5 | downstream_gene_variant | 32 | chr3 | 90.60852 | 90.61178 | 2.354976 | 0.3948673 |
| 20200 | ENSMUSG00000001025 | S100a6 | S100 calcium binding protein A6 (calcyclin) | upstream_gene_variant | 4 | chr3 | 90.61288 | 90.62418 | 8.287085 | 0.0000009 |
| 20200 | ENSMUSG00000001025 | S100a6 | S100 calcium binding protein A6 (calcyclin) | 5_prime_UTR_variant | 21 | chr3 | 90.61288 | 90.62418 | 8.287085 | 0.0000009 |
| 20200 | ENSMUSG00000001025 | S100a6 | S100 calcium binding protein A6 (calcyclin) | splice_region_variant | 2 | chr3 | 90.61288 | 90.62418 | 8.287085 | 0.0000009 |
| 20200 | ENSMUSG00000001025 | S100a6 | S100 calcium binding protein A6 (calcyclin) | intron_variant | 6 | chr3 | 90.61288 | 90.62418 | 8.287085 | 0.0000009 |
| 20200 | ENSMUSG00000001025 | S100a6 | S100 calcium binding protein A6 (calcyclin) | synonymous_variant | 5 | chr3 | 90.61288 | 90.62418 | 8.287085 | 0.0000009 |
| 20201 | ENSMUSG00000056054 | S100a8 | S100 calcium binding protein A8 (calgranulin A) | 5_prime_UTR_variant | 6 | chr3 | 90.66898 | 90.67003 | 4.049307 | 0.0000000 |
| 20201 | ENSMUSG00000056054 | S100a8 | S100 calcium binding protein A8 (calgranulin A) | intron_variant | 13 | chr3 | 90.66898 | 90.67003 | 4.049307 | 0.0000000 |
| 20201 | ENSMUSG00000056054 | S100a8 | S100 calcium binding protein A8 (calgranulin A) | missense_variant | 32 | chr3 | 90.66898 | 90.67003 | 4.049307 | 0.0000000 |
| 20201 | ENSMUSG00000056054 | S100a8 | S100 calcium binding protein A8 (calgranulin A) | splice_region_variant | 2 | chr3 | 90.66898 | 90.67003 | 4.049307 | 0.0000000 |
| 20201 | ENSMUSG00000056054 | S100a8 | S100 calcium binding protein A8 (calgranulin A) | synonymous_variant | 6 | chr3 | 90.66898 | 90.67003 | 4.049307 | 0.0000000 |
| 20202 | ENSMUSG00000056071 | S100a9 | S100 calcium binding protein A9 (calgranulin B) | synonymous_variant | 3 | chr3 | 90.69263 | 90.69572 | 5.584239 | 0.0000000 |
| 20202 | ENSMUSG00000056071 | S100a9 | S100 calcium binding protein A9 (calgranulin B) | missense_variant | 2 | chr3 | 90.69263 | 90.69572 | 5.584239 | 0.0000000 |
| 229550 | ENSMUSG00000091175 | S100a7l2 | S100 calcium binding protein A7 like 2 | missense_variant | 1 | chr3 | 91.08814 | 91.09080 | 2.352451 | 0.0367011 |
| 381493 | ENSMUSG00000063767 | S100a7a | S100 calcium binding protein A7A | 5_prime_UTR_variant | 4 | chr3 | 90.65430 | 90.65867 | 4.209865 | 0.0107132 |
| 381493 | ENSMUSG00000063767 | S100a7a | S100 calcium binding protein A7A | missense_variant | 1 | chr3 | 90.65430 | 90.65867 | 4.209865 | 0.0107132 |
| 381493 | ENSMUSG00000063767 | S100a7a | S100 calcium binding protein A7A | synonymous_variant | 2 | chr3 | 90.65430 | 90.65867 | 4.209865 | 0.0107132 |
| 381493 | ENSMUSG00000063767 | S100a7a | S100 calcium binding protein A7A | 3_prime_UTR_variant | 5 | chr3 | 90.65430 | 90.65867 | 4.209865 | 0.0107132 |
| 381493 | ENSMUSG00000063767 | S100a7a | S100 calcium binding protein A7A | downstream_gene_variant | 3 | chr3 | 90.65430 | 90.65867 | 4.209865 | 0.0107132 |
| 384997 | ENSMUSG00000042250 | Pglyrp4 | peptidoglycan recognition protein 4 | 5_prime_UTR_variant | 2 | chr3 | 90.72691 | 90.74152 | 3.083661 | 0.0001877 |
| 384997 | ENSMUSG00000042250 | Pglyrp4 | peptidoglycan recognition protein 4 | intron_variant | 1 | chr3 | 90.72691 | 90.74152 | 3.083661 | 0.0001877 |
| 384997 | ENSMUSG00000042250 | Pglyrp4 | peptidoglycan recognition protein 4 | non_coding_transcript_exon_variant | 11 | chr3 | 90.72691 | 90.74152 | 3.083661 | 0.0001877 |
| 384997 | ENSMUSG00000042250 | Pglyrp4 | peptidoglycan recognition protein 4 | non_coding_transcript_variant | 11 | chr3 | 90.72691 | 90.74152 | 3.083661 | 0.0001877 |
| 384997 | ENSMUSG00000042250 | Pglyrp4 | peptidoglycan recognition protein 4 | 3_prime_UTR_variant | 10 | chr3 | 90.72691 | 90.74152 | 3.083661 | 0.0001877 |
| 384997 | ENSMUSG00000042250 | Pglyrp4 | peptidoglycan recognition protein 4 | downstream_gene_variant | 10 | chr3 | 90.72691 | 90.74152 | 3.083661 | 0.0001877 |
| 619677 | ENSMUSG00000086377 | 4930529C04Rik | zinc finger, BED domain containing 4 pseudogene | non_coding_transcript_exon_variant | 6 | chr3 | 91.07166 | 91.07519 | 3.334494 | 0.9963280 |
| 619677 | ENSMUSG00000086377 | 4930529C04Rik | zinc finger, BED domain containing 4 pseudogene | non_coding_transcript_variant | 6 | chr3 | 91.07166 | 91.07519 | 3.334494 | 0.9963280 |
| 628324 | ENSMUSG00000094018 | S100a2 | S100 calcium binding protein A2 | missense_variant | 12 | chr3 | 90.56036 | 90.59153 | 3.685011 | 0.0218900 |
| 628324 | ENSMUSG00000094018 | S100a2 | S100 calcium binding protein A2 | upstream_gene_variant | 2 | chr3 | 90.56036 | 90.59153 | 3.685011 | 0.0218900 |
| 66166 | ENSMUSG00000042306 | S100a14 | S100 calcium binding protein A14 | upstream_gene_variant | 4 | chr3 | 90.52686 | 90.52884 | 5.086955 | 0.0096937 |
| 66166 | ENSMUSG00000042306 | S100a14 | S100 calcium binding protein A14 | intron_variant | 6 | chr3 | 90.52686 | 90.52884 | 5.086955 | 0.0096937 |
| 66166 | ENSMUSG00000042306 | S100a14 | S100 calcium binding protein A14 | synonymous_variant | 2 | chr3 | 90.52686 | 90.52884 | 5.086955 | 0.0096937 |
| 67860 | ENSMUSG00000074457 | S100a16 | S100 calcium binding protein A16 | intron_variant | 6 | chr3 | 90.53725 | 90.54315 | 5.364116 | 1.0000000 |
| 67860 | ENSMUSG00000074457 | S100a16 | S100 calcium binding protein A16 | non_coding_transcript_variant | 27 | chr3 | 90.53725 | 90.54315 | 5.364116 | 1.0000000 |
| 67860 | ENSMUSG00000074457 | S100a16 | S100 calcium binding protein A16 | 5_prime_UTR_variant | 6 | chr3 | 90.53725 | 90.54315 | 5.364116 | 1.0000000 |
| 67860 | ENSMUSG00000074457 | S100a16 | S100 calcium binding protein A16 | downstream_gene_variant | 29 | chr3 | 90.53725 | 90.54315 | 5.364116 | 1.0000000 |
| 67860 | ENSMUSG00000074457 | S100a16 | S100 calcium binding protein A16 | non_coding_transcript_exon_variant | 21 | chr3 | 90.53725 | 90.54315 | 5.364116 | 1.0000000 |
| 67860 | ENSMUSG00000074457 | S100a16 | S100 calcium binding protein A16 | upstream_gene_variant | 4 | chr3 | 90.53725 | 90.54315 | 5.364116 | 1.0000000 |
| 67860 | ENSMUSG00000074457 | S100a16 | S100 calcium binding protein A16 | 3_prime_UTR_variant | 29 | chr3 | 90.53725 | 90.54315 | 5.364116 | 1.0000000 |
For each QTL peak with a LOD > 7.7, we searched for colocated QTL for other phenotypes with LOD >= 6.0.
| Phenotype | Chr | Pos | LOD | CI low | CI high |
|---|---|---|---|---|---|
| lung_cxcl5 | 5 | 91.73410 | 6.724962 | 86.73410 | 96.7341 |
| serum_cxcl5 | 5 | 77.13883 | 9.683969 | 75.91675 | 91.7341 |
The serum Cxcl5 QTL on Chr 5 is colocated with one other QTL for lung: lung Cxcl5.
It’s difficult to say if these are the same peak. The allele effects are different.
Below is the association mapping plot for serum Cxcl5.
There are 108 unique genes in the QTL interval. We measured expression for 106 of these genes.
Plot a histogram of the correlations.
The correlations are distributed as expected. Plot the gene with the highest correlation vs. the phenotype, colored by DO generation.
Produce a list of genes with mean expression and correlation p-values.
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
| entrez | ensembl | symbol | genename | consequence | num_snps | chr | start | end | mean_expr | bonf.p.value |
|---|---|---|---|---|---|---|---|---|---|---|
| 100316803 | ENSMUSG00000080586 | Mir1187 | microRNA 1187 | non_coding_transcript_variant | 1 | chr5 | 82.79894 | 82.79906 | 1.539463 | 1.0000000 |
| 100316803 | ENSMUSG00000080586 | Mir1187 | microRNA 1187 | non_coding_transcript_exon_variant | 1 | chr5 | 82.79894 | 82.79906 | 1.539463 | 1.0000000 |
| 100559 | ENSMUSG00000061906 | Ugt2b38 | UDP glucuronosyltransferase 2 family, polypeptide B38 | synonymous_variant | 3 | chr5 | 87.40994 | 87.42420 | 1.741129 | 1.0000000 |
| 100559 | ENSMUSG00000061906 | Ugt2b38 | UDP glucuronosyltransferase 2 family, polypeptide B38 | missense_variant | 10 | chr5 | 87.40994 | 87.42420 | 1.741129 | 1.0000000 |
| 100559 | ENSMUSG00000061906 | Ugt2b38 | UDP glucuronosyltransferase 2 family, polypeptide B38 | 3_prime_UTR_variant | 1 | chr5 | 87.40994 | 87.42420 | 1.741129 | 1.0000000 |
| 100628577 | ENSMUSG00000093061 | Mir5098 | microRNA 5098 | mature_miRNA_variant | 1 | chr5 | 77.27276 | 77.27284 | NA | NA |
| 100727 | ENSMUSG00000029260 | Ugt2b34 | UDP glucuronosyltransferase 2 family, polypeptide B34 | 3_prime_UTR_variant | 31 | chr5 | 86.88977 | 86.90694 | 4.430571 | 1.0000000 |
| 100727 | ENSMUSG00000029260 | Ugt2b34 | UDP glucuronosyltransferase 2 family, polypeptide B34 | intron_variant | 13 | chr5 | 86.88977 | 86.90694 | 4.430571 | 1.0000000 |
| 100727 | ENSMUSG00000029260 | Ugt2b34 | UDP glucuronosyltransferase 2 family, polypeptide B34 | missense_variant | 3 | chr5 | 86.88977 | 86.90694 | 4.430571 | 1.0000000 |
| 100727 | ENSMUSG00000029260 | Ugt2b34 | UDP glucuronosyltransferase 2 family, polypeptide B34 | synonymous_variant | 4 | chr5 | 86.88977 | 86.90694 | 4.430571 | 1.0000000 |
| 104443 | ENSMUSG00000035528 | Npffr2 | neuropeptide FF receptor 2 | synonymous_variant | 7 | chr5 | 89.52743 | 89.58374 | 3.151722 | 1.0000000 |
| 104443 | ENSMUSG00000035528 | Npffr2 | neuropeptide FF receptor 2 | 3_prime_UTR_variant | 7 | chr5 | 89.52743 | 89.58374 | 3.151722 | 1.0000000 |
| 104443 | ENSMUSG00000035528 | Npffr2 | neuropeptide FF receptor 2 | missense_variant | 11 | chr5 | 89.52743 | 89.58374 | 3.151722 | 1.0000000 |
| 104443 | ENSMUSG00000035528 | Npffr2 | neuropeptide FF receptor 2 | 5_prime_UTR_variant | 5 | chr5 | 89.52743 | 89.58374 | 3.151722 | 1.0000000 |
| 112417 | ENSMUSG00000057425 | Ugt2b37 | UDP glucuronosyltransferase 2 family, polypeptide B37 | missense_variant | 8 | chr5 | 87.24049 | 87.25480 | 2.242334 | 1.0000000 |
| 112417 | ENSMUSG00000057425 | Ugt2b37 | UDP glucuronosyltransferase 2 family, polypeptide B37 | synonymous_variant | 10 | chr5 | 87.24049 | 87.25480 | 2.242334 | 1.0000000 |
| 112417 | ENSMUSG00000057425 | Ugt2b37 | UDP glucuronosyltransferase 2 family, polypeptide B37 | 3_prime_UTR_variant | 5 | chr5 | 87.24049 | 87.25480 | 2.242334 | 1.0000000 |
| 11576 | ENSMUSG00000054932 | Afp | alpha fetoprotein | missense_variant | 3 | chr5 | 90.49074 | 90.50891 | 3.950631 | 1.0000000 |
| 11576 | ENSMUSG00000054932 | Afp | alpha fetoprotein | synonymous_variant | 18 | chr5 | 90.49074 | 90.50891 | 3.950631 | 1.0000000 |
| 11576 | ENSMUSG00000054932 | Afp | alpha fetoprotein | 3_prime_UTR_variant | 12 | chr5 | 90.49074 | 90.50891 | 3.950631 | 1.0000000 |
| 11576 | ENSMUSG00000054932 | Afp | alpha fetoprotein | 5_prime_UTR_variant | 2 | chr5 | 90.49074 | 90.50891 | 3.950631 | 1.0000000 |
| 11576 | ENSMUSG00000054932 | Afp | alpha fetoprotein | intron_variant | 19 | chr5 | 90.49074 | 90.50891 | 3.950631 | 1.0000000 |
| 11576 | ENSMUSG00000054932 | Afp | alpha fetoprotein | splice_region_variant | 1 | chr5 | 90.49074 | 90.50891 | 3.950631 | 1.0000000 |
| 11657 | ENSMUSG00000029368 | Alb | albumin | intron_variant | 6 | chr5 | 90.46090 | 90.47660 | 3.918060 | 1.0000000 |
| 11657 | ENSMUSG00000029368 | Alb | albumin | missense_variant | 4 | chr5 | 90.46090 | 90.47660 | 3.918060 | 1.0000000 |
| 11657 | ENSMUSG00000029368 | Alb | albumin | synonymous_variant | 9 | chr5 | 90.46090 | 90.47660 | 3.918060 | 1.0000000 |
| 11698 | ENSMUSG00000029288 | Ambn | ameloblastin | missense_variant | 2 | chr5 | 88.45599 | 88.46853 | 3.048604 | 1.0000000 |
| 11698 | ENSMUSG00000029288 | Ambn | ameloblastin | 3_prime_UTR_variant | 1 | chr5 | 88.45599 | 88.46853 | 3.048604 | 1.0000000 |
| 11839 | ENSMUSG00000029378 | Areg | amphiregulin | 5_prime_UTR_variant | 5 | chr5 | 91.13960 | 91.14843 | 4.486210 | 1.0000000 |
| 11839 | ENSMUSG00000029378 | Areg | amphiregulin | missense_variant | 1 | chr5 | 91.13960 | 91.14843 | 4.486210 | 1.0000000 |
| 11839 | ENSMUSG00000029378 | Areg | amphiregulin | 3_prime_UTR_variant | 2 | chr5 | 91.13960 | 91.14843 | 4.486210 | 1.0000000 |
| 11839 | ENSMUSG00000029378 | Areg | amphiregulin | upstream_gene_variant | 2 | chr5 | 91.13960 | 91.14843 | 4.486210 | 1.0000000 |
| 11839 | ENSMUSG00000029378 | Areg | amphiregulin | synonymous_variant | 4 | chr5 | 91.13960 | 91.14843 | 4.486210 | 1.0000000 |
| 12223 | ENSMUSG00000082361 | Btc | betacellulin, epidermal growth factor family member | 3_prime_UTR_variant | 80 | chr5 | 91.35726 | 91.40299 | 3.681392 | 1.0000000 |
| 12223 | ENSMUSG00000082361 | Btc | betacellulin, epidermal growth factor family member | intron_variant | 29 | chr5 | 91.35726 | 91.40299 | 3.681392 | 1.0000000 |
| 12223 | ENSMUSG00000082361 | Btc | betacellulin, epidermal growth factor family member | synonymous_variant | 4 | chr5 | 91.35726 | 91.40299 | 3.681392 | 1.0000000 |
| 12223 | ENSMUSG00000082361 | Btc | betacellulin, epidermal growth factor family member | 5_prime_UTR_variant | 6 | chr5 | 91.35726 | 91.40299 | 3.681392 | 1.0000000 |
| 12617 | ENSMUSG00000029253 | Cenpc1 | centromere protein C1 | intron_variant | 31 | chr5 | 86.01202 | 86.06558 | 5.115153 | 1.0000000 |
| 12617 | ENSMUSG00000029253 | Cenpc1 | centromere protein C1 | 3_prime_UTR_variant | 1 | chr5 | 86.01202 | 86.06558 | 5.115153 | 1.0000000 |
| 12617 | ENSMUSG00000029253 | Cenpc1 | centromere protein C1 | synonymous_variant | 11 | chr5 | 86.01202 | 86.06558 | 5.115153 | 1.0000000 |
| 12617 | ENSMUSG00000029253 | Cenpc1 | centromere protein C1 | 5_prime_UTR_variant | 4 | chr5 | 86.01202 | 86.06558 | 5.115153 | 1.0000000 |
| 12617 | ENSMUSG00000029253 | Cenpc1 | centromere protein C1 | missense_variant | 12 | chr5 | 86.01202 | 86.06558 | 5.115153 | 1.0000000 |
| 12753 | ENSMUSG00000029238 | Clock | circadian locomotor output cycles kaput | synonymous_variant | 5 | chr5 | 76.20987 | 76.30479 | 8.460944 | 1.0000000 |
| 12753 | ENSMUSG00000029238 | Clock | circadian locomotor output cycles kaput | downstream_gene_variant | 21 | chr5 | 76.20987 | 76.30479 | 8.460944 | 1.0000000 |
| 12753 | ENSMUSG00000029238 | Clock | circadian locomotor output cycles kaput | 3_prime_UTR_variant | 53 | chr5 | 76.20987 | 76.30479 | 8.460944 | 1.0000000 |
| 12753 | ENSMUSG00000029238 | Clock | circadian locomotor output cycles kaput | intron_variant | 27 | chr5 | 76.20987 | 76.30479 | 8.460944 | 1.0000000 |
| 12753 | ENSMUSG00000029238 | Clock | circadian locomotor output cycles kaput | 5_prime_UTR_variant | 2 | chr5 | 76.20987 | 76.30479 | 8.460944 | 1.0000000 |
| 12753 | ENSMUSG00000029238 | Clock | circadian locomotor output cycles kaput | downstream_gene_variant | 4 | chr5 | 76.20987 | 76.30479 | 8.460944 | 1.0000000 |
| 12753 | ENSMUSG00000029238 | Clock | circadian locomotor output cycles kaput | upstream_gene_variant | 11 | chr5 | 76.20987 | 76.30479 | 8.460944 | 1.0000000 |
| 12990 | ENSMUSG00000070702 | Csn1s1 | casein alpha s1 | missense_variant | 7 | chr5 | 87.66621 | 87.68258 | 2.081382 | 1.0000000 |
| 12990 | ENSMUSG00000070702 | Csn1s1 | casein alpha s1 | intron_variant | 31 | chr5 | 87.66621 | 87.68258 | 2.081382 | 1.0000000 |
| 12990 | ENSMUSG00000070702 | Csn1s1 | casein alpha s1 | 3_prime_UTR_variant | 11 | chr5 | 87.66621 | 87.68258 | 2.081382 | 1.0000000 |
| 12990 | ENSMUSG00000070702 | Csn1s1 | casein alpha s1 | synonymous_variant | 5 | chr5 | 87.66621 | 87.68258 | 2.081382 | 1.0000000 |
| 12991 | ENSMUSG00000063157 | Csn2 | casein beta | 3_prime_UTR_variant | 24 | chr5 | 87.69262 | 87.69963 | 3.908905 | 1.0000000 |
| 12991 | ENSMUSG00000063157 | Csn2 | casein beta | upstream_gene_variant | 3 | chr5 | 87.69262 | 87.69963 | 3.908905 | 1.0000000 |
| 12991 | ENSMUSG00000063157 | Csn2 | casein beta | missense_variant | 3 | chr5 | 87.69262 | 87.69963 | 3.908905 | 1.0000000 |
| 12991 | ENSMUSG00000063157 | Csn2 | casein beta | intron_variant | 52 | chr5 | 87.69262 | 87.69963 | 3.908905 | 1.0000000 |
| 12992 | ENSMUSG00000061388 | Csn1s2b | casein alpha s2-like B | 5_prime_UTR_variant | 1 | chr5 | 87.80808 | 87.82443 | 1.944694 | 1.0000000 |
| 12992 | ENSMUSG00000061388 | Csn1s2b | casein alpha s2-like B | missense_variant | 3 | chr5 | 87.80808 | 87.82443 | 1.944694 | 1.0000000 |
| 12992 | ENSMUSG00000061388 | Csn1s2b | casein alpha s2-like B | intron_variant | 16 | chr5 | 87.80808 | 87.82443 | 1.944694 | 1.0000000 |
| 12992 | ENSMUSG00000061388 | Csn1s2b | casein alpha s2-like B | upstream_gene_variant | 1 | chr5 | 87.80808 | 87.82443 | 1.944694 | 1.0000000 |
| 12992 | ENSMUSG00000061388 | Csn1s2b | casein alpha s2-like B | synonymous_variant | 1 | chr5 | 87.80808 | 87.82443 | 1.944694 | 1.0000000 |
| 12992 | ENSMUSG00000061388 | Csn1s2b | casein alpha s2-like B | downstream_gene_variant | 2 | chr5 | 87.80808 | 87.82443 | 1.944694 | 1.0000000 |
| 12992 | ENSMUSG00000061388 | Csn1s2b | casein alpha s2-like B | downstream_gene_variant | 3 | chr5 | 87.80808 | 87.82443 | 1.944694 | 1.0000000 |
| 12992 | ENSMUSG00000061388 | Csn1s2b | casein alpha s2-like B | 3_prime_UTR_variant | 28 | chr5 | 87.80808 | 87.82443 | 1.944694 | 1.0000000 |
| 12993 | ENSMUSG00000061937 | Csn1s2a | casein alpha s2-like A | synonymous_variant | 2 | chr5 | 87.77457 | 87.78880 | 2.622745 | 1.0000000 |
| 12993 | ENSMUSG00000061937 | Csn1s2a | casein alpha s2-like A | intron_variant | 12 | chr5 | 87.77457 | 87.78880 | 2.622745 | 1.0000000 |
| 12993 | ENSMUSG00000061937 | Csn1s2a | casein alpha s2-like A | missense_variant | 6 | chr5 | 87.77457 | 87.78880 | 2.622745 | 1.0000000 |
| 12994 | ENSMUSG00000001622 | Csn3 | casein kappa | non_coding_transcript_exon_variant | 27 | chr5 | 87.92558 | 87.93267 | 3.288057 | 1.0000000 |
| 12994 | ENSMUSG00000001622 | Csn3 | casein kappa | splice_region_variant | 2 | chr5 | 87.92558 | 87.93267 | 3.288057 | 1.0000000 |
| 12994 | ENSMUSG00000001622 | Csn3 | casein kappa | non_coding_transcript_variant | 27 | chr5 | 87.92558 | 87.93267 | 3.288057 | 1.0000000 |
| 12994 | ENSMUSG00000001622 | Csn3 | casein kappa | upstream_gene_variant | 7 | chr5 | 87.92558 | 87.93267 | 3.288057 | 1.0000000 |
| 12994 | ENSMUSG00000001622 | Csn3 | casein kappa | missense_variant | 2 | chr5 | 87.92558 | 87.93267 | 3.288057 | 1.0000000 |
| 12994 | ENSMUSG00000001622 | Csn3 | casein kappa | 5_prime_UTR_variant | 2 | chr5 | 87.92558 | 87.93267 | 3.288057 | 1.0000000 |
| 12994 | ENSMUSG00000001622 | Csn3 | casein kappa | 3_prime_UTR_variant | 24 | chr5 | 87.92558 | 87.93267 | 3.288057 | 1.0000000 |
| 12994 | ENSMUSG00000001622 | Csn3 | casein kappa | downstream_gene_variant | 32 | chr5 | 87.92558 | 87.93267 | 3.288057 | 1.0000000 |
| 12994 | ENSMUSG00000001622 | Csn3 | casein kappa | intron_variant | 35 | chr5 | 87.92558 | 87.93267 | 3.288057 | 1.0000000 |
| 12994 | ENSMUSG00000001622 | Csn3 | casein kappa | synonymous_variant | 8 | chr5 | 87.92558 | 87.93267 | 3.288057 | 1.0000000 |
| 13178 | ENSMUSG00000029366 | Dck | deoxycytidine kinase | upstream_gene_variant | 41 | chr5 | 88.76500 | 88.78328 | 5.397476 | 1.0000000 |
| 13178 | ENSMUSG00000029366 | Dck | deoxycytidine kinase | 3_prime_UTR_variant | 32 | chr5 | 88.76500 | 88.78328 | 5.397476 | 1.0000000 |
| 13178 | ENSMUSG00000029366 | Dck | deoxycytidine kinase | 5_prime_UTR_variant | 4 | chr5 | 88.76500 | 88.78328 | 5.397476 | 1.0000000 |
| 13178 | ENSMUSG00000029366 | Dck | deoxycytidine kinase | synonymous_variant | 5 | chr5 | 88.76500 | 88.78328 | 5.397476 | 1.0000000 |
| 13801 | ENSMUSG00000029286 | Enam | enamelin | synonymous_variant | 25 | chr5 | 88.48798 | 88.50605 | 2.283901 | 1.0000000 |
| 13801 | ENSMUSG00000029286 | Enam | enamelin | missense_variant | 31 | chr5 | 88.48798 | 88.50605 | 2.283901 | 1.0000000 |
| 13801 | ENSMUSG00000029286 | Enam | enamelin | 3_prime_UTR_variant | 15 | chr5 | 88.48798 | 88.50605 | 2.283901 | 1.0000000 |
| 13839 | ENSMUSG00000029245 | Epha5 | Eph receptor A5 | non_coding_transcript_exon_variant | 64 | chr5 | 84.05476 | 84.41738 | 3.162902 | 0.3014720 |
| 13839 | ENSMUSG00000029245 | Epha5 | Eph receptor A5 | missense_variant | 3 | chr5 | 84.05476 | 84.41738 | 3.162902 | 0.3014720 |
| 13839 | ENSMUSG00000029245 | Epha5 | Eph receptor A5 | 5_prime_UTR_variant | 19 | chr5 | 84.05476 | 84.41738 | 3.162902 | 0.3014720 |
| 13839 | ENSMUSG00000029245 | Epha5 | Eph receptor A5 | upstream_gene_variant | 15 | chr5 | 84.05476 | 84.41738 | 3.162902 | 0.3014720 |
| 13839 | ENSMUSG00000029245 | Epha5 | Eph receptor A5 | downstream_gene_variant | 29 | chr5 | 84.05476 | 84.41738 | 3.162902 | 0.3014720 |
| 13839 | ENSMUSG00000029245 | Epha5 | Eph receptor A5 | intron_variant | 48 | chr5 | 84.05476 | 84.41738 | 3.162902 | 0.3014720 |
| 13839 | ENSMUSG00000029245 | Epha5 | Eph receptor A5 | 3_prime_UTR_variant | 34 | chr5 | 84.05476 | 84.41738 | 3.162902 | 0.3014720 |
| 13839 | ENSMUSG00000029245 | Epha5 | Eph receptor A5 | synonymous_variant | 23 | chr5 | 84.05476 | 84.41738 | 3.162902 | 0.3014720 |
| 13839 | ENSMUSG00000029245 | Epha5 | Eph receptor A5 | non_coding_transcript_variant | 64 | chr5 | 84.05476 | 84.41738 | 3.162902 | 0.3014720 |
| 13874 | ENSMUSG00000029377 | Ereg | epiregulin | 3_prime_UTR_variant | 60 | chr5 | 91.07462 | 91.09365 | 5.274770 | 1.0000000 |
| 13874 | ENSMUSG00000029377 | Ereg | epiregulin | 5_prime_UTR_variant | 2 | chr5 | 91.07462 | 91.09365 | 5.274770 | 1.0000000 |
| 13874 | ENSMUSG00000029377 | Ereg | epiregulin | missense_variant | 1 | chr5 | 91.07462 | 91.09365 | 5.274770 | 1.0000000 |
| 13874 | ENSMUSG00000029377 | Ereg | epiregulin | synonymous_variant | 1 | chr5 | 91.07462 | 91.09365 | 5.274770 | 1.0000000 |
| 14473 | ENSMUSG00000035540 | Gc | vitamin D binding protein | 5_prime_UTR_variant | 4 | chr5 | 89.41752 | 89.45790 | 3.541866 | 1.0000000 |
| 14473 | ENSMUSG00000035540 | Gc | vitamin D binding protein | 3_prime_UTR_variant | 5 | chr5 | 89.41752 | 89.45790 | 3.541866 | 1.0000000 |
| 14473 | ENSMUSG00000035540 | Gc | vitamin D binding protein | intron_variant | 2 | chr5 | 89.41752 | 89.45790 | 3.541866 | 1.0000000 |
| 14473 | ENSMUSG00000035540 | Gc | vitamin D binding protein | missense_variant | 5 | chr5 | 89.41752 | 89.45790 | 3.541866 | 1.0000000 |
| 14473 | ENSMUSG00000035540 | Gc | vitamin D binding protein | synonymous_variant | 10 | chr5 | 89.41752 | 89.45790 | 3.541866 | 1.0000000 |
| 14715 | ENSMUSG00000029255 | Gnrhr | gonadotropin releasing hormone receptor | downstream_gene_variant | 34 | chr5 | 86.18075 | 86.19790 | 3.394041 | 1.0000000 |
| 14715 | ENSMUSG00000029255 | Gnrhr | gonadotropin releasing hormone receptor | 3_prime_UTR_variant | 56 | chr5 | 86.18075 | 86.19790 | 3.394041 | 1.0000000 |
| 14715 | ENSMUSG00000029255 | Gnrhr | gonadotropin releasing hormone receptor | synonymous_variant | 6 | chr5 | 86.18075 | 86.19790 | 3.394041 | 1.0000000 |
| 14715 | ENSMUSG00000029255 | Gnrhr | gonadotropin releasing hormone receptor | 5_prime_UTR_variant | 4 | chr5 | 86.18075 | 86.19790 | 3.394041 | 1.0000000 |
| 14715 | ENSMUSG00000029255 | Gnrhr | gonadotropin releasing hormone receptor | upstream_gene_variant | 1 | chr5 | 86.18075 | 86.19790 | 3.394041 | 1.0000000 |
| 14715 | ENSMUSG00000029255 | Gnrhr | gonadotropin releasing hormone receptor | intron_variant | 22 | chr5 | 86.18075 | 86.19790 | 3.394041 | 1.0000000 |
| 14825 | ENSMUSG00000029380 | Cxcl1 | chemokine (C-X-C motif) ligand 1 | 5_prime_UTR_variant | 2 | chr5 | 90.89124 | 90.89311 | 5.982533 | 1.0000000 |
| 14825 | ENSMUSG00000029380 | Cxcl1 | chemokine (C-X-C motif) ligand 1 | synonymous_variant | 4 | chr5 | 90.89124 | 90.89311 | 5.982533 | 1.0000000 |
| 14825 | ENSMUSG00000029380 | Cxcl1 | chemokine (C-X-C motif) ligand 1 | 3_prime_UTR_variant | 10 | chr5 | 90.89124 | 90.89311 | 5.982533 | 1.0000000 |
| 16069 | ENSMUSG00000067149 | Jchain | immunoglobulin joining chain | intron_variant | 5 | chr5 | 88.51981 | 88.52789 | 7.619204 | 1.0000000 |
| 16069 | ENSMUSG00000067149 | Jchain | immunoglobulin joining chain | 3_prime_UTR_variant | 38 | chr5 | 88.51981 | 88.52789 | 7.619204 | 1.0000000 |
| 16069 | ENSMUSG00000067149 | Jchain | immunoglobulin joining chain | downstream_gene_variant | 52 | chr5 | 88.51981 | 88.52789 | 7.619204 | 1.0000000 |
| 16069 | ENSMUSG00000067149 | Jchain | immunoglobulin joining chain | 5_prime_UTR_variant | 5 | chr5 | 88.51981 | 88.52789 | 7.619204 | 1.0000000 |
| 16069 | ENSMUSG00000067149 | Jchain | immunoglobulin joining chain | synonymous_variant | 2 | chr5 | 88.51981 | 88.52789 | 7.619204 | 1.0000000 |
| 16069 | ENSMUSG00000067149 | Jchain | immunoglobulin joining chain | missense_variant | 4 | chr5 | 88.51981 | 88.52789 | 7.619204 | 1.0000000 |
| 16542 | ENSMUSG00000062960 | Kdr | kinase insert domain protein receptor | intron_variant | 58 | chr5 | 75.93283 | 75.97846 | 8.473123 | 1.0000000 |
| 16542 | ENSMUSG00000062960 | Kdr | kinase insert domain protein receptor | missense_variant | 1 | chr5 | 75.93283 | 75.97846 | 8.473123 | 1.0000000 |
| 16542 | ENSMUSG00000062960 | Kdr | kinase insert domain protein receptor | non_coding_transcript_exon_variant | 30 | chr5 | 75.93283 | 75.97846 | 8.473123 | 1.0000000 |
| 16542 | ENSMUSG00000062960 | Kdr | kinase insert domain protein receptor | 5_prime_UTR_variant | 6 | chr5 | 75.93283 | 75.97846 | 8.473123 | 1.0000000 |
| 16542 | ENSMUSG00000062960 | Kdr | kinase insert domain protein receptor | 3_prime_UTR_variant | 11 | chr5 | 75.93283 | 75.97846 | 8.473123 | 1.0000000 |
| 16542 | ENSMUSG00000062960 | Kdr | kinase insert domain protein receptor | downstream_gene_variant | 48 | chr5 | 75.93283 | 75.97846 | 8.473123 | 1.0000000 |
| 16542 | ENSMUSG00000062960 | Kdr | kinase insert domain protein receptor | non_coding_transcript_variant | 30 | chr5 | 75.93283 | 75.97846 | 8.473123 | 1.0000000 |
| 16542 | ENSMUSG00000062960 | Kdr | kinase insert domain protein receptor | synonymous_variant | 22 | chr5 | 75.93283 | 75.97846 | 8.473123 | 1.0000000 |
| 17830 | ENSMUSG00000064156 | Prol1 | proline rich, lacrimal 1 | 5_prime_UTR_variant | 2 | chr5 | 88.31731 | 88.32881 | 2.667356 | 1.0000000 |
| 17830 | ENSMUSG00000064156 | Prol1 | proline rich, lacrimal 1 | 3_prime_UTR_variant | 4 | chr5 | 88.31731 | 88.32881 | 2.667356 | 1.0000000 |
| 17830 | ENSMUSG00000064156 | Prol1 | proline rich, lacrimal 1 | synonymous_variant | 7 | chr5 | 88.31731 | 88.32881 | 2.667356 | 1.0000000 |
| 17830 | ENSMUSG00000064156 | Prol1 | proline rich, lacrimal 1 | missense_variant | 19 | chr5 | 88.31731 | 88.32881 | 2.667356 | 1.0000000 |
| 194597 | ENSMUSG00000072845 | Tmprss11a | transmembrane protease, serine 11a | 5_prime_UTR_variant | 2 | chr5 | 86.41041 | 86.46899 | 2.862274 | 1.0000000 |
| 194597 | ENSMUSG00000072845 | Tmprss11a | transmembrane protease, serine 11a | missense_variant | 4 | chr5 | 86.41041 | 86.46899 | 2.862274 | 1.0000000 |
| 194597 | ENSMUSG00000072845 | Tmprss11a | transmembrane protease, serine 11a | 3_prime_UTR_variant | 10 | chr5 | 86.41041 | 86.46899 | 2.862274 | 1.0000000 |
| 194597 | ENSMUSG00000072845 | Tmprss11a | transmembrane protease, serine 11a | synonymous_variant | 1 | chr5 | 86.41041 | 86.46899 | 2.862274 | 1.0000000 |
| 194597 | ENSMUSG00000072845 | Tmprss11a | transmembrane protease, serine 11a | splice_region_variant | 1 | chr5 | 86.41041 | 86.46899 | 2.862274 | 1.0000000 |
| 19712 | ENSMUSG00000029249 | Rest | RE1-silencing transcription factor | synonymous_variant | 5 | chr5 | 77.26549 | 77.28643 | 6.341179 | 1.0000000 |
| 19712 | ENSMUSG00000029249 | Rest | RE1-silencing transcription factor | intron_variant | 1 | chr5 | 77.26549 | 77.28643 | 6.341179 | 1.0000000 |
| 19712 | ENSMUSG00000029249 | Rest | RE1-silencing transcription factor | missense_variant | 8 | chr5 | 77.26549 | 77.28643 | 6.341179 | 1.0000000 |
| 19712 | ENSMUSG00000029249 | Rest | RE1-silencing transcription factor | 5_prime_UTR_variant | 5 | chr5 | 77.26549 | 77.28643 | 6.341179 | 1.0000000 |
| 19712 | ENSMUSG00000029249 | Rest | RE1-silencing transcription factor | upstream_gene_variant | 4 | chr5 | 77.26549 | 77.28643 | 6.341179 | 1.0000000 |
| 19712 | ENSMUSG00000029249 | Rest | RE1-silencing transcription factor | 3_prime_UTR_variant | 10 | chr5 | 77.26549 | 77.28643 | 6.341179 | 1.0000000 |
| 19712 | ENSMUSG00000029249 | Rest | RE1-silencing transcription factor | intron_variant | 1 | chr5 | 77.26549 | 77.28643 | 6.341179 | 1.0000000 |
| 20309 | ENSMUSG00000029375 | Cxcl15 | chemokine (C-X-C motif) ligand 15 | 3_prime_UTR_variant | 5 | chr5 | 90.79453 | 90.80307 | 10.310390 | 1.0000000 |
| 20309 | ENSMUSG00000029375 | Cxcl15 | chemokine (C-X-C motif) ligand 15 | missense_variant | 4 | chr5 | 90.79453 | 90.80307 | 10.310390 | 1.0000000 |
| 20310 | ENSMUSG00000058427 | Cxcl2 | chemokine (C-X-C motif) ligand 2 | missense_variant | 2 | chr5 | 90.90387 | 90.90594 | 4.690301 | 1.0000000 |
| 20310 | ENSMUSG00000058427 | Cxcl2 | chemokine (C-X-C motif) ligand 2 | 3_prime_UTR_variant | 38 | chr5 | 90.90387 | 90.90594 | 4.690301 | 1.0000000 |
| 20310 | ENSMUSG00000058427 | Cxcl2 | chemokine (C-X-C motif) ligand 2 | synonymous_variant | 12 | chr5 | 90.90387 | 90.90594 | 4.690301 | 1.0000000 |
| 20310 | ENSMUSG00000058427 | Cxcl2 | chemokine (C-X-C motif) ligand 2 | splice_region_variant | 2 | chr5 | 90.90387 | 90.90594 | 4.690301 | 1.0000000 |
| 20310 | ENSMUSG00000058427 | Cxcl2 | chemokine (C-X-C motif) ligand 2 | intron_variant | 15 | chr5 | 90.90387 | 90.90594 | 4.690301 | 1.0000000 |
| 20311 | ENSMUSG00000029371 | Cxcl5 | chemokine (C-X-C motif) ligand 5 | intron_variant | 5 | chr5 | 90.75936 | 90.76162 | 6.807721 | 1.0000000 |
| 20311 | ENSMUSG00000029371 | Cxcl5 | chemokine (C-X-C motif) ligand 5 | 3_prime_UTR_variant | 16 | chr5 | 90.75936 | 90.76162 | 6.807721 | 1.0000000 |
| 20311 | ENSMUSG00000029371 | Cxcl5 | chemokine (C-X-C motif) ligand 5 | 5_prime_UTR_variant | 2 | chr5 | 90.75936 | 90.76162 | 6.807721 | 1.0000000 |
| 20311 | ENSMUSG00000029371 | Cxcl5 | chemokine (C-X-C motif) ligand 5 | missense_variant | 5 | chr5 | 90.75936 | 90.76162 | 6.807721 | 1.0000000 |
| 20599 | ENSMUSG00000029280 | Smr3a | submaxillary gland androgen regulated protein 3A | intron_variant | 6 | chr5 | 87.96952 | 88.00853 | 2.815030 | 1.0000000 |
| 20599 | ENSMUSG00000029280 | Smr3a | submaxillary gland androgen regulated protein 3A | synonymous_variant | 5 | chr5 | 87.96952 | 88.00853 | 2.815030 | 1.0000000 |
| 20599 | ENSMUSG00000029280 | Smr3a | submaxillary gland androgen regulated protein 3A | 3_prime_UTR_variant | 2 | chr5 | 87.96952 | 88.00853 | 2.815030 | 1.0000000 |
| 20599 | ENSMUSG00000029280 | Smr3a | submaxillary gland androgen regulated protein 3A | upstream_gene_variant | 1 | chr5 | 87.96952 | 88.00853 | 2.815030 | 1.0000000 |
| 20599 | ENSMUSG00000029280 | Smr3a | submaxillary gland androgen regulated protein 3A | 5_prime_UTR_variant | 4 | chr5 | 87.96952 | 88.00853 | 2.815030 | 1.0000000 |
| 20599 | ENSMUSG00000029280 | Smr3a | submaxillary gland androgen regulated protein 3A | missense_variant | 6 | chr5 | 87.96952 | 88.00853 | 2.815030 | 1.0000000 |
| 20600 | ENSMUSG00000029281 | Smr2 | submaxillary gland androgen regulated protein 2 | synonymous_variant | 1 | chr5 | 88.08656 | 88.10905 | 2.990139 | 1.0000000 |
| 20600 | ENSMUSG00000029281 | Smr2 | submaxillary gland androgen regulated protein 2 | missense_variant | 2 | chr5 | 88.08656 | 88.10905 | 2.990139 | 1.0000000 |
| 20600 | ENSMUSG00000029281 | Smr2 | submaxillary gland androgen regulated protein 2 | intron_variant | 5 | chr5 | 88.08656 | 88.10905 | 2.990139 | 1.0000000 |
| 20860 | ENSMUSG00000029272 | Sult1e1 | sulfotransferase family 1E, member 1 | missense_variant | 1 | chr5 | 87.57597 | 87.59159 | 2.408023 | 1.0000000 |
| 20860 | ENSMUSG00000029272 | Sult1e1 | sulfotransferase family 1E, member 1 | 3_prime_UTR_variant | 2 | chr5 | 87.57597 | 87.59159 | 2.408023 | 1.0000000 |
| 20860 | ENSMUSG00000029272 | Sult1e1 | sulfotransferase family 1E, member 1 | synonymous_variant | 3 | chr5 | 87.57597 | 87.59159 | 2.408023 | 1.0000000 |
| 20860 | ENSMUSG00000029272 | Sult1e1 | sulfotransferase family 1E, member 1 | 5_prime_UTR_variant | 3 | chr5 | 87.57597 | 87.59159 | 2.408023 | 1.0000000 |
| 21982 | ENSMUSG00000029234 | Tmem165 | transmembrane protein 165 | missense_variant | 2 | chr5 | 76.18388 | 76.20924 | 7.899548 | 1.0000000 |
| 21982 | ENSMUSG00000029234 | Tmem165 | transmembrane protein 165 | non_coding_transcript_exon_variant | 21 | chr5 | 76.18388 | 76.20924 | 7.899548 | 1.0000000 |
| 21982 | ENSMUSG00000029234 | Tmem165 | transmembrane protein 165 | non_coding_transcript_variant | 21 | chr5 | 76.18388 | 76.20924 | 7.899548 | 1.0000000 |
| 21982 | ENSMUSG00000029234 | Tmem165 | transmembrane protein 165 | 5_prime_UTR_variant | 5 | chr5 | 76.18388 | 76.20924 | 7.899548 | 1.0000000 |
| 21982 | ENSMUSG00000029234 | Tmem165 | transmembrane protein 165 | upstream_gene_variant | 13 | chr5 | 76.18388 | 76.20924 | 7.899548 | 1.0000000 |
| 21982 | ENSMUSG00000029234 | Tmem165 | transmembrane protein 165 | downstream_gene_variant | 15 | chr5 | 76.18388 | 76.20924 | 7.899548 | 1.0000000 |
| 21982 | ENSMUSG00000029234 | Tmem165 | transmembrane protein 165 | downstream_gene_variant | 35 | chr5 | 76.18388 | 76.20924 | 7.899548 | 1.0000000 |
| 21982 | ENSMUSG00000029234 | Tmem165 | transmembrane protein 165 | synonymous_variant | 12 | chr5 | 76.18388 | 76.20924 | 7.899548 | 1.0000000 |
| 21982 | ENSMUSG00000029234 | Tmem165 | transmembrane protein 165 | intron_variant | 8 | chr5 | 76.18388 | 76.20924 | 7.899548 | 1.0000000 |
| 21982 | ENSMUSG00000029234 | Tmem165 | transmembrane protein 165 | 3_prime_UTR_variant | 4 | chr5 | 76.18388 | 76.20924 | 7.899548 | 1.0000000 |
| 22238 | ENSMUSG00000054630 | Ugt2b5 | UDP glucuronosyltransferase 2 family, polypeptide B5 | missense_variant | 3 | chr5 | 87.12496 | 87.14032 | 1.720344 | 1.0000000 |
| 22238 | ENSMUSG00000054630 | Ugt2b5 | UDP glucuronosyltransferase 2 family, polypeptide B5 | 3_prime_UTR_variant | 2 | chr5 | 87.12496 | 87.14032 | 1.720344 | 1.0000000 |
| 22238 | ENSMUSG00000054630 | Ugt2b5 | UDP glucuronosyltransferase 2 family, polypeptide B5 | synonymous_variant | 5 | chr5 | 87.12496 | 87.14032 | 1.720344 | 1.0000000 |
| 231326 | ENSMUSG00000055923 | Aasdh | aminoadipate-semialdehyde dehydrogenase | downstream_gene_variant | 86 | chr5 | 76.87366 | 76.90551 | 4.557722 | 1.0000000 |
| 231326 | ENSMUSG00000055923 | Aasdh | aminoadipate-semialdehyde dehydrogenase | NMD_transcript_variant | 178 | chr5 | 76.87366 | 76.90551 | 4.557722 | 1.0000000 |
| 231326 | ENSMUSG00000055923 | Aasdh | aminoadipate-semialdehyde dehydrogenase | missense_variant | 54 | chr5 | 76.87366 | 76.90551 | 4.557722 | 1.0000000 |
| 231326 | ENSMUSG00000055923 | Aasdh | aminoadipate-semialdehyde dehydrogenase | splice_region_variant | 5 | chr5 | 76.87366 | 76.90551 | 4.557722 | 1.0000000 |
| 231326 | ENSMUSG00000055923 | Aasdh | aminoadipate-semialdehyde dehydrogenase | downstream_gene_variant | 52 | chr5 | 76.87366 | 76.90551 | 4.557722 | 1.0000000 |
| 231326 | ENSMUSG00000055923 | Aasdh | aminoadipate-semialdehyde dehydrogenase | 3_prime_UTR_variant | 97 | chr5 | 76.87366 | 76.90551 | 4.557722 | 1.0000000 |
| 231326 | ENSMUSG00000055923 | Aasdh | aminoadipate-semialdehyde dehydrogenase | intron_variant | 62 | chr5 | 76.87366 | 76.90551 | 4.557722 | 1.0000000 |
| 231326 | ENSMUSG00000055923 | Aasdh | aminoadipate-semialdehyde dehydrogenase | 5_prime_UTR_variant | 27 | chr5 | 76.87366 | 76.90551 | 4.557722 | 1.0000000 |
| 231326 | ENSMUSG00000055923 | Aasdh | aminoadipate-semialdehyde dehydrogenase | non_coding_transcript_exon_variant | 157 | chr5 | 76.87366 | 76.90551 | 4.557722 | 1.0000000 |
| 231326 | ENSMUSG00000055923 | Aasdh | aminoadipate-semialdehyde dehydrogenase | non_coding_transcript_variant | 159 | chr5 | 76.87366 | 76.90551 | 4.557722 | 1.0000000 |
| 231326 | ENSMUSG00000055923 | Aasdh | aminoadipate-semialdehyde dehydrogenase | synonymous_variant | 61 | chr5 | 76.87366 | 76.90551 | 4.557722 | 1.0000000 |
| 231326 | ENSMUSG00000055923 | Aasdh | aminoadipate-semialdehyde dehydrogenase | upstream_gene_variant | 94 | chr5 | 76.87366 | 76.90551 | 4.557722 | 1.0000000 |
| 231327 | ENSMUSG00000029246 | Ppat | phosphoribosyl pyrophosphate amidotransferase | downstream_gene_variant | 55 | chr5 | 76.91325 | 76.95158 | 6.037189 | 1.0000000 |
| 231327 | ENSMUSG00000029246 | Ppat | phosphoribosyl pyrophosphate amidotransferase | NMD_transcript_variant | 83 | chr5 | 76.91325 | 76.95158 | 6.037189 | 1.0000000 |
| 231327 | ENSMUSG00000029246 | Ppat | phosphoribosyl pyrophosphate amidotransferase | synonymous_variant | 12 | chr5 | 76.91325 | 76.95158 | 6.037189 | 1.0000000 |
| 231327 | ENSMUSG00000029246 | Ppat | phosphoribosyl pyrophosphate amidotransferase | non_coding_transcript_variant | 18 | chr5 | 76.91325 | 76.95158 | 6.037189 | 1.0000000 |
| 231327 | ENSMUSG00000029246 | Ppat | phosphoribosyl pyrophosphate amidotransferase | non_coding_transcript_exon_variant | 16 | chr5 | 76.91325 | 76.95158 | 6.037189 | 1.0000000 |
| 231327 | ENSMUSG00000029246 | Ppat | phosphoribosyl pyrophosphate amidotransferase | 3_prime_UTR_variant | 69 | chr5 | 76.91325 | 76.95158 | 6.037189 | 1.0000000 |
| 231327 | ENSMUSG00000029246 | Ppat | phosphoribosyl pyrophosphate amidotransferase | 5_prime_UTR_variant | 5 | chr5 | 76.91325 | 76.95158 | 6.037189 | 1.0000000 |
| 231327 | ENSMUSG00000029246 | Ppat | phosphoribosyl pyrophosphate amidotransferase | upstream_gene_variant | 10 | chr5 | 76.91325 | 76.95158 | 6.037189 | 1.0000000 |
| 231327 | ENSMUSG00000029246 | Ppat | phosphoribosyl pyrophosphate amidotransferase | upstream_gene_variant | 7 | chr5 | 76.91325 | 76.95158 | 6.037189 | 1.0000000 |
| 231327 | ENSMUSG00000029246 | Ppat | phosphoribosyl pyrophosphate amidotransferase | splice_region_variant | 1 | chr5 | 76.91325 | 76.95158 | 6.037189 | 1.0000000 |
| 231327 | ENSMUSG00000029246 | Ppat | phosphoribosyl pyrophosphate amidotransferase | NMD_transcript_variant | 5 | chr5 | 76.91325 | 76.95158 | 6.037189 | 1.0000000 |
| 231327 | ENSMUSG00000029246 | Ppat | phosphoribosyl pyrophosphate amidotransferase | intron_variant | 6 | chr5 | 76.91325 | 76.95158 | 6.037189 | 1.0000000 |
| 231327 | ENSMUSG00000029246 | Ppat | phosphoribosyl pyrophosphate amidotransferase | 5_prime_UTR_variant | 10 | chr5 | 76.91325 | 76.95158 | 6.037189 | 1.0000000 |
| 231329 | ENSMUSG00000029250 | Polr2b | polymerase (RNA) II (DNA directed) polypeptide B | 5_prime_UTR_variant | 14 | chr5 | 77.31015 | 77.34932 | 7.924508 | 1.0000000 |
| 231329 | ENSMUSG00000029250 | Polr2b | polymerase (RNA) II (DNA directed) polypeptide B | non_coding_transcript_exon_variant | 37 | chr5 | 77.31015 | 77.34932 | 7.924508 | 1.0000000 |
| 231329 | ENSMUSG00000029250 | Polr2b | polymerase (RNA) II (DNA directed) polypeptide B | splice_region_variant | 3 | chr5 | 77.31015 | 77.34932 | 7.924508 | 1.0000000 |
| 231329 | ENSMUSG00000029250 | Polr2b | polymerase (RNA) II (DNA directed) polypeptide B | intron_variant | 7 | chr5 | 77.31015 | 77.34932 | 7.924508 | 1.0000000 |
| 231329 | ENSMUSG00000029250 | Polr2b | polymerase (RNA) II (DNA directed) polypeptide B | upstream_gene_variant | 9 | chr5 | 77.31015 | 77.34932 | 7.924508 | 1.0000000 |
| 231329 | ENSMUSG00000029250 | Polr2b | polymerase (RNA) II (DNA directed) polypeptide B | upstream_gene_variant | 70 | chr5 | 77.31015 | 77.34932 | 7.924508 | 1.0000000 |
| 231329 | ENSMUSG00000029250 | Polr2b | polymerase (RNA) II (DNA directed) polypeptide B | 3_prime_UTR_variant | 2 | chr5 | 77.31015 | 77.34932 | 7.924508 | 1.0000000 |
| 231329 | ENSMUSG00000029250 | Polr2b | polymerase (RNA) II (DNA directed) polypeptide B | downstream_gene_variant | 8 | chr5 | 77.31015 | 77.34932 | 7.924508 | 1.0000000 |
| 231329 | ENSMUSG00000029250 | Polr2b | polymerase (RNA) II (DNA directed) polypeptide B | downstream_gene_variant | 2 | chr5 | 77.31015 | 77.34932 | 7.924508 | 1.0000000 |
| 231329 | ENSMUSG00000029250 | Polr2b | polymerase (RNA) II (DNA directed) polypeptide B | non_coding_transcript_variant | 37 | chr5 | 77.31015 | 77.34932 | 7.924508 | 1.0000000 |
| 231329 | ENSMUSG00000029250 | Polr2b | polymerase (RNA) II (DNA directed) polypeptide B | stop_gained | 2 | chr5 | 77.31015 | 77.34932 | 7.924508 | 1.0000000 |
| 231329 | ENSMUSG00000029250 | Polr2b | polymerase (RNA) II (DNA directed) polypeptide B | synonymous_variant | 36 | chr5 | 77.31015 | 77.34932 | 7.924508 | 1.0000000 |
| 231329 | ENSMUSG00000029250 | Polr2b | polymerase (RNA) II (DNA directed) polypeptide B | 3_prime_UTR_variant | 3 | chr5 | 77.31015 | 77.34932 | 7.924508 | 1.0000000 |
| 231380 | ENSMUSG00000035898 | Uba6 | ubiquitin-like modifier activating enzyme 6 | 3_prime_UTR_variant | 18 | chr5 | 86.10929 | 86.17280 | 6.546319 | 1.0000000 |
| 231380 | ENSMUSG00000035898 | Uba6 | ubiquitin-like modifier activating enzyme 6 | upstream_gene_variant | 2 | chr5 | 86.10929 | 86.17280 | 6.546319 | 1.0000000 |
| 231380 | ENSMUSG00000035898 | Uba6 | ubiquitin-like modifier activating enzyme 6 | intron_variant | 12 | chr5 | 86.10929 | 86.17280 | 6.546319 | 1.0000000 |
| 231380 | ENSMUSG00000035898 | Uba6 | ubiquitin-like modifier activating enzyme 6 | downstream_gene_variant | 4 | chr5 | 86.10929 | 86.17280 | 6.546319 | 1.0000000 |
| 231380 | ENSMUSG00000035898 | Uba6 | ubiquitin-like modifier activating enzyme 6 | 5_prime_UTR_variant | 3 | chr5 | 86.10929 | 86.17280 | 6.546319 | 1.0000000 |
| 231380 | ENSMUSG00000035898 | Uba6 | ubiquitin-like modifier activating enzyme 6 | splice_region_variant | 1 | chr5 | 86.10929 | 86.17280 | 6.546319 | 1.0000000 |
| 231380 | ENSMUSG00000035898 | Uba6 | ubiquitin-like modifier activating enzyme 6 | synonymous_variant | 6 | chr5 | 86.10929 | 86.17280 | 6.546319 | 1.0000000 |
| 231380 | ENSMUSG00000035898 | Uba6 | ubiquitin-like modifier activating enzyme 6 | missense_variant | 6 | chr5 | 86.10929 | 86.17280 | 6.546319 | 1.0000000 |
| 231380 | ENSMUSG00000035898 | Uba6 | ubiquitin-like modifier activating enzyme 6 | downstream_gene_variant | 22 | chr5 | 86.10929 | 86.17280 | 6.546319 | 1.0000000 |
| 231380 | ENSMUSG00000035898 | Uba6 | ubiquitin-like modifier activating enzyme 6 | non_coding_transcript_exon_variant | 20 | chr5 | 86.10929 | 86.17280 | 6.546319 | 1.0000000 |
| 231380 | ENSMUSG00000035898 | Uba6 | ubiquitin-like modifier activating enzyme 6 | non_coding_transcript_variant | 21 | chr5 | 86.10929 | 86.17280 | 6.546319 | 1.0000000 |
| 231382 | ENSMUSG00000061259 | Tmprss11d | transmembrane protease, serine 11d | 3_prime_UTR_variant | 28 | chr5 | 86.30222 | 86.37342 | 2.288943 | 1.0000000 |
| 231382 | ENSMUSG00000061259 | Tmprss11d | transmembrane protease, serine 11d | synonymous_variant | 6 | chr5 | 86.30222 | 86.37342 | 2.288943 | 1.0000000 |
| 231382 | ENSMUSG00000061259 | Tmprss11d | transmembrane protease, serine 11d | 5_prime_UTR_variant | 4 | chr5 | 86.30222 | 86.37342 | 2.288943 | 1.0000000 |
| 231382 | ENSMUSG00000061259 | Tmprss11d | transmembrane protease, serine 11d | upstream_gene_variant | 2 | chr5 | 86.30222 | 86.37342 | 2.288943 | 1.0000000 |
| 231382 | ENSMUSG00000061259 | Tmprss11d | transmembrane protease, serine 11d | intron_variant | 2 | chr5 | 86.30222 | 86.37342 | 2.288943 | 1.0000000 |
| 231386 | ENSMUSG00000035851 | Ythdc1 | YTH domain containing 1 | NMD_transcript_variant | 68 | chr5 | 86.72891 | 86.83666 | 7.769306 | 1.0000000 |
| 231386 | ENSMUSG00000035851 | Ythdc1 | YTH domain containing 1 | non_coding_transcript_variant | 67 | chr5 | 86.72891 | 86.83666 | 7.769306 | 1.0000000 |
| 231386 | ENSMUSG00000035851 | Ythdc1 | YTH domain containing 1 | synonymous_variant | 6 | chr5 | 86.72891 | 86.83666 | 7.769306 | 1.0000000 |
| 231386 | ENSMUSG00000035851 | Ythdc1 | YTH domain containing 1 | missense_variant | 3 | chr5 | 86.72891 | 86.83666 | 7.769306 | 1.0000000 |
| 231386 | ENSMUSG00000035851 | Ythdc1 | YTH domain containing 1 | intron_variant | 33 | chr5 | 86.72891 | 86.83666 | 7.769306 | 1.0000000 |
| 231386 | ENSMUSG00000035851 | Ythdc1 | YTH domain containing 1 | downstream_gene_variant | 36 | chr5 | 86.72891 | 86.83666 | 7.769306 | 1.0000000 |
| 231386 | ENSMUSG00000035851 | Ythdc1 | YTH domain containing 1 | 5_prime_UTR_variant | 6 | chr5 | 86.72891 | 86.83666 | 7.769306 | 1.0000000 |
| 231386 | ENSMUSG00000035851 | Ythdc1 | YTH domain containing 1 | upstream_gene_variant | 32 | chr5 | 86.72891 | 86.83666 | 7.769306 | 1.0000000 |
| 231386 | ENSMUSG00000035851 | Ythdc1 | YTH domain containing 1 | non_coding_transcript_exon_variant | 67 | chr5 | 86.72891 | 86.83666 | 7.769306 | 1.0000000 |
| 231386 | ENSMUSG00000035851 | Ythdc1 | YTH domain containing 1 | 3_prime_UTR_variant | 29 | chr5 | 86.72891 | 86.83666 | 7.769306 | 1.0000000 |
| 231396 | ENSMUSG00000070704 | Ugt2b36 | UDP glucuronosyltransferase 2 family, polypeptide B36 | 5_prime_UTR_variant | 1 | chr5 | 87.06593 | 87.09256 | 1.863059 | 1.0000000 |
| 231396 | ENSMUSG00000070704 | Ugt2b36 | UDP glucuronosyltransferase 2 family, polypeptide B36 | missense_variant | 3 | chr5 | 87.06593 | 87.09256 | 1.863059 | 1.0000000 |
| 231396 | ENSMUSG00000070704 | Ugt2b36 | UDP glucuronosyltransferase 2 family, polypeptide B36 | downstream_gene_variant | 3 | chr5 | 87.06593 | 87.09256 | 1.863059 | 1.0000000 |
| 231396 | ENSMUSG00000070704 | Ugt2b36 | UDP glucuronosyltransferase 2 family, polypeptide B36 | upstream_gene_variant | 4 | chr5 | 87.06593 | 87.09256 | 1.863059 | 1.0000000 |
| 231396 | ENSMUSG00000070704 | Ugt2b36 | UDP glucuronosyltransferase 2 family, polypeptide B36 | intron_variant | 5 | chr5 | 87.06593 | 87.09256 | 1.863059 | 1.0000000 |
| 231396 | ENSMUSG00000070704 | Ugt2b36 | UDP glucuronosyltransferase 2 family, polypeptide B36 | 3_prime_UTR_variant | 2 | chr5 | 87.06593 | 87.09256 | 1.863059 | 1.0000000 |
| 231396 | ENSMUSG00000070704 | Ugt2b36 | UDP glucuronosyltransferase 2 family, polypeptide B36 | synonymous_variant | 2 | chr5 | 87.06593 | 87.09256 | 1.863059 | 1.0000000 |
| 231413 | ENSMUSG00000044221 | Grsf1 | G-rich RNA sequence binding factor 1 | 3_prime_UTR_variant | 16 | chr5 | 88.65945 | 88.67617 | 6.957243 | 1.0000000 |
| 231413 | ENSMUSG00000044221 | Grsf1 | G-rich RNA sequence binding factor 1 | downstream_gene_variant | 19 | chr5 | 88.65945 | 88.67617 | 6.957243 | 1.0000000 |
| 231413 | ENSMUSG00000044221 | Grsf1 | G-rich RNA sequence binding factor 1 | non_coding_transcript_variant | 3 | chr5 | 88.65945 | 88.67617 | 6.957243 | 1.0000000 |
| 231413 | ENSMUSG00000044221 | Grsf1 | G-rich RNA sequence binding factor 1 | upstream_gene_variant | 5 | chr5 | 88.65945 | 88.67617 | 6.957243 | 1.0000000 |
| 231413 | ENSMUSG00000044221 | Grsf1 | G-rich RNA sequence binding factor 1 | synonymous_variant | 5 | chr5 | 88.65945 | 88.67617 | 6.957243 | 1.0000000 |
| 231413 | ENSMUSG00000044221 | Grsf1 | G-rich RNA sequence binding factor 1 | 5_prime_UTR_variant | 3 | chr5 | 88.65945 | 88.67617 | 6.957243 | 1.0000000 |
| 231413 | ENSMUSG00000044221 | Grsf1 | G-rich RNA sequence binding factor 1 | non_coding_transcript_exon_variant | 3 | chr5 | 88.65945 | 88.67617 | 6.957243 | 1.0000000 |
| 231413 | ENSMUSG00000044221 | Grsf1 | G-rich RNA sequence binding factor 1 | intron_variant | 3 | chr5 | 88.65945 | 88.67617 | 6.957243 | 1.0000000 |
| 231430 | ENSMUSG00000035505 | Cox18 | cytochrome c oxidase assembly protein 18 | NMD_transcript_variant | 36 | chr5 | 90.21472 | 90.22400 | 5.575720 | 1.0000000 |
| 231430 | ENSMUSG00000035505 | Cox18 | cytochrome c oxidase assembly protein 18 | splice_region_variant | 1 | chr5 | 90.21472 | 90.22400 | 5.575720 | 1.0000000 |
| 231430 | ENSMUSG00000035505 | Cox18 | cytochrome c oxidase assembly protein 18 | 5_prime_UTR_variant | 2 | chr5 | 90.21472 | 90.22400 | 5.575720 | 1.0000000 |
| 231430 | ENSMUSG00000035505 | Cox18 | cytochrome c oxidase assembly protein 18 | upstream_gene_variant | 14 | chr5 | 90.21472 | 90.22400 | 5.575720 | 1.0000000 |
| 231430 | ENSMUSG00000035505 | Cox18 | cytochrome c oxidase assembly protein 18 | 3_prime_UTR_variant | 6 | chr5 | 90.21472 | 90.22400 | 5.575720 | 1.0000000 |
| 231430 | ENSMUSG00000035505 | Cox18 | cytochrome c oxidase assembly protein 18 | downstream_gene_variant | 22 | chr5 | 90.21472 | 90.22400 | 5.575720 | 1.0000000 |
| 231430 | ENSMUSG00000035505 | Cox18 | cytochrome c oxidase assembly protein 18 | missense_variant | 27 | chr5 | 90.21472 | 90.22400 | 5.575720 | 1.0000000 |
| 231430 | ENSMUSG00000035505 | Cox18 | cytochrome c oxidase assembly protein 18 | non_coding_transcript_exon_variant | 34 | chr5 | 90.21472 | 90.22400 | 5.575720 | 1.0000000 |
| 231430 | ENSMUSG00000035505 | Cox18 | cytochrome c oxidase assembly protein 18 | non_coding_transcript_variant | 34 | chr5 | 90.21472 | 90.22400 | 5.575720 | 1.0000000 |
| 231430 | ENSMUSG00000035505 | Cox18 | cytochrome c oxidase assembly protein 18 | synonymous_variant | 15 | chr5 | 90.21472 | 90.22400 | 5.575720 | 1.0000000 |
| 231430 | ENSMUSG00000035505 | Cox18 | cytochrome c oxidase assembly protein 18 | intron_variant | 14 | chr5 | 90.21472 | 90.22400 | 5.575720 | 1.0000000 |
| 231430 | ENSMUSG00000035505 | Cox18 | cytochrome c oxidase assembly protein 18 | upstream_gene_variant | 49 | chr5 | 90.21472 | 90.22400 | 5.575720 | 1.0000000 |
| 231440 | ENSMUSG00000034981 | Parm1 | prostate androgen-regulated mucin-like protein 1 | 3_prime_UTR_variant | 36 | chr5 | 91.51762 | 91.62689 | 6.402091 | 1.0000000 |
| 231440 | ENSMUSG00000034981 | Parm1 | prostate androgen-regulated mucin-like protein 1 | missense_variant | 6 | chr5 | 91.51762 | 91.62689 | 6.402091 | 1.0000000 |
| 231440 | ENSMUSG00000034981 | Parm1 | prostate androgen-regulated mucin-like protein 1 | synonymous_variant | 4 | chr5 | 91.51762 | 91.62689 | 6.402091 | 1.0000000 |
| 231440 | ENSMUSG00000034981 | Parm1 | prostate androgen-regulated mucin-like protein 1 | 5_prime_UTR_variant | 5 | chr5 | 91.51762 | 91.62689 | 6.402091 | 1.0000000 |
| 243078 | ENSMUSG00000049537 | Tecrl | trans-2,3-enoyl-CoA reductase-like | 3_prime_UTR_variant | 16 | chr5 | 83.27814 | 83.35519 | 3.989782 | 1.0000000 |
| 243078 | ENSMUSG00000049537 | Tecrl | trans-2,3-enoyl-CoA reductase-like | upstream_gene_variant | 1 | chr5 | 83.27814 | 83.35519 | 3.989782 | 1.0000000 |
| 243078 | ENSMUSG00000049537 | Tecrl | trans-2,3-enoyl-CoA reductase-like | 5_prime_UTR_variant | 1 | chr5 | 83.27814 | 83.35519 | 3.989782 | 1.0000000 |
| 243078 | ENSMUSG00000049537 | Tecrl | trans-2,3-enoyl-CoA reductase-like | synonymous_variant | 5 | chr5 | 83.27814 | 83.35519 | 3.989782 | 1.0000000 |
| 243078 | ENSMUSG00000049537 | Tecrl | trans-2,3-enoyl-CoA reductase-like | missense_variant | 9 | chr5 | 83.27814 | 83.35519 | 3.989782 | 1.0000000 |
| 243078 | ENSMUSG00000049537 | Tecrl | trans-2,3-enoyl-CoA reductase-like | intron_variant | 2 | chr5 | 83.27814 | 83.35519 | 3.989782 | 1.0000000 |
| 243083 | ENSMUSG00000048764 | Tmprss11f | transmembrane protease, serine 11f | non_coding_transcript_exon_variant | 44 | chr5 | 86.52190 | 86.63242 | 2.495718 | 1.0000000 |
| 243083 | ENSMUSG00000048764 | Tmprss11f | transmembrane protease, serine 11f | 3_prime_UTR_variant | 13 | chr5 | 86.52190 | 86.63242 | 2.495718 | 1.0000000 |
| 243083 | ENSMUSG00000048764 | Tmprss11f | transmembrane protease, serine 11f | synonymous_variant | 3 | chr5 | 86.52190 | 86.63242 | 2.495718 | 1.0000000 |
| 243083 | ENSMUSG00000048764 | Tmprss11f | transmembrane protease, serine 11f | intron_variant | 44 | chr5 | 86.52190 | 86.63242 | 2.495718 | 1.0000000 |
| 243083 | ENSMUSG00000048764 | Tmprss11f | transmembrane protease, serine 11f | downstream_gene_variant | 6 | chr5 | 86.52190 | 86.63242 | 2.495718 | 1.0000000 |
| 243083 | ENSMUSG00000048764 | Tmprss11f | transmembrane protease, serine 11f | non_coding_transcript_variant | 44 | chr5 | 86.52190 | 86.63242 | 2.495718 | 1.0000000 |
| 243084 | ENSMUSG00000054537 | Tmprss11e | transmembrane protease, serine 11e | 3_prime_UTR_variant | 48 | chr5 | 86.70519 | 86.74581 | 3.498551 | 1.0000000 |
| 243084 | ENSMUSG00000054537 | Tmprss11e | transmembrane protease, serine 11e | missense_variant | 3 | chr5 | 86.70519 | 86.74581 | 3.498551 | 1.0000000 |
| 243084 | ENSMUSG00000054537 | Tmprss11e | transmembrane protease, serine 11e | synonymous_variant | 7 | chr5 | 86.70519 | 86.74581 | 3.498551 | 1.0000000 |
| 243084 | ENSMUSG00000054537 | Tmprss11e | transmembrane protease, serine 11e | intron_variant | 2 | chr5 | 86.70519 | 86.74581 | 3.498551 | 1.0000000 |
| 243085 | ENSMUSG00000035811 | Ugt2b35 | UDP glucuronosyltransferase 2 family, polypeptide B35 | downstream_gene_variant | 13 | chr5 | 87.00086 | 87.01327 | 2.059162 | 1.0000000 |
| 243085 | ENSMUSG00000035811 | Ugt2b35 | UDP glucuronosyltransferase 2 family, polypeptide B35 | splice_region_variant | 1 | chr5 | 87.00086 | 87.01327 | 2.059162 | 1.0000000 |
| 243085 | ENSMUSG00000035811 | Ugt2b35 | UDP glucuronosyltransferase 2 family, polypeptide B35 | missense_variant | 4 | chr5 | 87.00086 | 87.01327 | 2.059162 | 1.0000000 |
| 243085 | ENSMUSG00000035811 | Ugt2b35 | UDP glucuronosyltransferase 2 family, polypeptide B35 | synonymous_variant | 6 | chr5 | 87.00086 | 87.01327 | 2.059162 | 1.0000000 |
| 280662 | ENSMUSG00000029369 | Afm | afamin | splice_region_variant | 1 | chr5 | 90.51893 | 90.55354 | 2.059770 | 1.0000000 |
| 280662 | ENSMUSG00000029369 | Afm | afamin | synonymous_variant | 10 | chr5 | 90.51893 | 90.55354 | 2.059770 | 1.0000000 |
| 280662 | ENSMUSG00000029369 | Afm | afamin | intron_variant | 24 | chr5 | 90.51893 | 90.55354 | 2.059770 | 1.0000000 |
| 280662 | ENSMUSG00000029369 | Afm | afamin | 3_prime_UTR_variant | 26 | chr5 | 90.51893 | 90.55354 | 2.059770 | 1.0000000 |
| 280662 | ENSMUSG00000029369 | Afm | afamin | missense_variant | 14 | chr5 | 90.51893 | 90.55354 | 2.059770 | 1.0000000 |
| 280662 | ENSMUSG00000029369 | Afm | afamin | 5_prime_UTR_variant | 9 | chr5 | 90.51893 | 90.55354 | 2.059770 | 1.0000000 |
| 280662 | ENSMUSG00000029369 | Afm | afamin | downstream_gene_variant | 4 | chr5 | 90.51893 | 90.55354 | 2.059770 | 1.0000000 |
| 280662 | ENSMUSG00000029369 | Afm | afamin | upstream_gene_variant | 1 | chr5 | 90.51893 | 90.55354 | 2.059770 | 1.0000000 |
| 29817 | ENSMUSG00000036256 | Igfbp7 | insulin-like growth factor binding protein 7 | 3_prime_UTR_variant | 2 | chr5 | 77.34924 | 77.40804 | 10.044863 | 1.0000000 |
| 29817 | ENSMUSG00000036256 | Igfbp7 | insulin-like growth factor binding protein 7 | splice_region_variant | 1 | chr5 | 77.34924 | 77.40804 | 10.044863 | 1.0000000 |
| 29817 | ENSMUSG00000036256 | Igfbp7 | insulin-like growth factor binding protein 7 | missense_variant | 6 | chr5 | 77.34924 | 77.40804 | 10.044863 | 1.0000000 |
| 29817 | ENSMUSG00000036256 | Igfbp7 | insulin-like growth factor binding protein 7 | synonymous_variant | 12 | chr5 | 77.34924 | 77.40804 | 10.044863 | 1.0000000 |
| 29817 | ENSMUSG00000036256 | Igfbp7 | insulin-like growth factor binding protein 7 | intron_variant | 4 | chr5 | 77.34924 | 77.40804 | 10.044863 | 1.0000000 |
| 29817 | ENSMUSG00000036256 | Igfbp7 | insulin-like growth factor binding protein 7 | downstream_gene_variant | 6 | chr5 | 77.34924 | 77.40804 | 10.044863 | 1.0000000 |
| 29817 | ENSMUSG00000036256 | Igfbp7 | insulin-like growth factor binding protein 7 | 3_prime_UTR_variant | 5 | chr5 | 77.34924 | 77.40804 | 10.044863 | 1.0000000 |
| 319387 | ENSMUSG00000037605 | Adgrl3 | adhesion G protein-coupled receptor L3 | non_coding_transcript_exon_variant | 191 | chr5 | 81.02014 | 81.82513 | 5.476637 | 1.0000000 |
| 319387 | ENSMUSG00000037605 | Adgrl3 | adhesion G protein-coupled receptor L3 | 5_prime_UTR_variant | 43 | chr5 | 81.02014 | 81.82513 | 5.476637 | 1.0000000 |
| 319387 | ENSMUSG00000037605 | Adgrl3 | adhesion G protein-coupled receptor L3 | upstream_gene_variant | 48 | chr5 | 81.02014 | 81.82513 | 5.476637 | 1.0000000 |
| 319387 | ENSMUSG00000037605 | Adgrl3 | adhesion G protein-coupled receptor L3 | NMD_transcript_variant | 195 | chr5 | 81.02014 | 81.82513 | 5.476637 | 1.0000000 |
| 319387 | ENSMUSG00000037605 | Adgrl3 | adhesion G protein-coupled receptor L3 | non_coding_transcript_variant | 202 | chr5 | 81.02014 | 81.82513 | 5.476637 | 1.0000000 |
| 319387 | ENSMUSG00000037605 | Adgrl3 | adhesion G protein-coupled receptor L3 | intron_variant | 139 | chr5 | 81.02014 | 81.82513 | 5.476637 | 1.0000000 |
| 319387 | ENSMUSG00000037605 | Adgrl3 | adhesion G protein-coupled receptor L3 | 3_prime_UTR_variant | 79 | chr5 | 81.02014 | 81.82513 | 5.476637 | 1.0000000 |
| 319387 | ENSMUSG00000037605 | Adgrl3 | adhesion G protein-coupled receptor L3 | downstream_gene_variant | 59 | chr5 | 81.02014 | 81.82513 | 5.476637 | 1.0000000 |
| 319387 | ENSMUSG00000037605 | Adgrl3 | adhesion G protein-coupled receptor L3 | missense_variant | 14 | chr5 | 81.02014 | 81.82513 | 5.476637 | 1.0000000 |
| 319387 | ENSMUSG00000037605 | Adgrl3 | adhesion G protein-coupled receptor L3 | synonymous_variant | 42 | chr5 | 81.02014 | 81.82513 | 5.476637 | 1.0000000 |
| 319875 | ENSMUSG00000035861 | Tmprss11b | transmembrane protease, serine 11B | 5_prime_UTR_variant | 1 | chr5 | 86.65763 | 86.67636 | 2.467032 | 1.0000000 |
| 319875 | ENSMUSG00000035861 | Tmprss11b | transmembrane protease, serine 11B | 3_prime_UTR_variant | 30 | chr5 | 86.65763 | 86.67636 | 2.467032 | 1.0000000 |
| 319875 | ENSMUSG00000035861 | Tmprss11b | transmembrane protease, serine 11B | synonymous_variant | 3 | chr5 | 86.65763 | 86.67636 | 2.467032 | 1.0000000 |
| 319875 | ENSMUSG00000035861 | Tmprss11b | transmembrane protease, serine 11B | missense_variant | 4 | chr5 | 86.65763 | 86.67636 | 2.467032 | 1.0000000 |
| 320454 | ENSMUSG00000079451 | Tmprss11g | transmembrane protease, serine 11g | missense_variant | 3 | chr5 | 86.48588 | 86.51860 | 2.835885 | 1.0000000 |
| 320454 | ENSMUSG00000079451 | Tmprss11g | transmembrane protease, serine 11g | 5_prime_UTR_variant | 6 | chr5 | 86.48588 | 86.51860 | 2.835885 | 1.0000000 |
| 320454 | ENSMUSG00000079451 | Tmprss11g | transmembrane protease, serine 11g | upstream_gene_variant | 12 | chr5 | 86.48588 | 86.51860 | 2.835885 | 1.0000000 |
| 320454 | ENSMUSG00000079451 | Tmprss11g | transmembrane protease, serine 11g | synonymous_variant | 6 | chr5 | 86.48588 | 86.51860 | 2.835885 | 1.0000000 |
| 320454 | ENSMUSG00000079451 | Tmprss11g | transmembrane protease, serine 11g | downstream_gene_variant | 11 | chr5 | 86.48588 | 86.51860 | 2.835885 | 1.0000000 |
| 320454 | ENSMUSG00000079451 | Tmprss11g | transmembrane protease, serine 11g | 3_prime_UTR_variant | 47 | chr5 | 86.48588 | 86.51860 | 2.835885 | 1.0000000 |
| 320827 | ENSMUSG00000036377 | Cracd | capping protein inhibiting regulator of actin | upstream_gene_variant | 60 | chr5 | 76.65768 | 76.87355 | 4.526203 | 0.9268244 |
| 320827 | ENSMUSG00000036377 | Cracd | capping protein inhibiting regulator of actin | missense_variant | 29 | chr5 | 76.65768 | 76.87355 | 4.526203 | 0.9268244 |
| 320827 | ENSMUSG00000036377 | Cracd | capping protein inhibiting regulator of actin | 3_prime_UTR_variant | 62 | chr5 | 76.65768 | 76.87355 | 4.526203 | 0.9268244 |
| 320827 | ENSMUSG00000036377 | Cracd | capping protein inhibiting regulator of actin | downstream_gene_variant | 70 | chr5 | 76.65768 | 76.87355 | 4.526203 | 0.9268244 |
| 320827 | ENSMUSG00000036377 | Cracd | capping protein inhibiting regulator of actin | 5_prime_UTR_variant | 11 | chr5 | 76.65768 | 76.87355 | 4.526203 | 0.9268244 |
| 320827 | ENSMUSG00000036377 | Cracd | capping protein inhibiting regulator of actin | non_coding_transcript_variant | 33 | chr5 | 76.65768 | 76.87355 | 4.526203 | 0.9268244 |
| 320827 | ENSMUSG00000036377 | Cracd | capping protein inhibiting regulator of actin | downstream_gene_variant | 42 | chr5 | 76.65768 | 76.87355 | 4.526203 | 0.9268244 |
| 320827 | ENSMUSG00000036377 | Cracd | capping protein inhibiting regulator of actin | synonymous_variant | 39 | chr5 | 76.65768 | 76.87355 | 4.526203 | 0.9268244 |
| 320827 | ENSMUSG00000036377 | Cracd | capping protein inhibiting regulator of actin | intron_variant | 28 | chr5 | 76.65768 | 76.87355 | 4.526203 | 0.9268244 |
| 320827 | ENSMUSG00000036377 | Cracd | capping protein inhibiting regulator of actin | non_coding_transcript_exon_variant | 32 | chr5 | 76.65768 | 76.87355 | 4.526203 | 0.9268244 |
| 330119 | ENSMUSG00000043635 | Adamts3 | a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 3 | missense_variant | 10 | chr5 | 89.67709 | 89.88333 | 3.846883 | 1.0000000 |
| 330119 | ENSMUSG00000043635 | Adamts3 | a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 3 | synonymous_variant | 23 | chr5 | 89.67709 | 89.88333 | 3.846883 | 1.0000000 |
| 330119 | ENSMUSG00000043635 | Adamts3 | a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 3 | 5_prime_UTR_variant | 1 | chr5 | 89.67709 | 89.88333 | 3.846883 | 1.0000000 |
| 330119 | ENSMUSG00000043635 | Adamts3 | a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 3 | intron_variant | 36 | chr5 | 89.67709 | 89.88333 | 3.846883 | 1.0000000 |
| 330122 | ENSMUSG00000029379 | Cxcl3 | chemokine (C-X-C motif) ligand 3 | splice_region_variant | 1 | chr5 | 90.78610 | 90.78809 | 3.567004 | 1.0000000 |
| 330122 | ENSMUSG00000029379 | Cxcl3 | chemokine (C-X-C motif) ligand 3 | 3_prime_UTR_variant | 16 | chr5 | 90.78610 | 90.78809 | 3.567004 | 1.0000000 |
| 330122 | ENSMUSG00000029379 | Cxcl3 | chemokine (C-X-C motif) ligand 3 | synonymous_variant | 3 | chr5 | 90.78610 | 90.78809 | 3.567004 | 1.0000000 |
| 381644 | ENSMUSG00000036403 | Cep135 | centrosomal protein 135 | 5_prime_UTR_variant | 10 | chr5 | 76.58870 | 76.64647 | 5.928933 | 1.0000000 |
| 381644 | ENSMUSG00000036403 | Cep135 | centrosomal protein 135 | upstream_gene_variant | 6 | chr5 | 76.58870 | 76.64647 | 5.928933 | 1.0000000 |
| 381644 | ENSMUSG00000036403 | Cep135 | centrosomal protein 135 | non_coding_transcript_exon_variant | 62 | chr5 | 76.58870 | 76.64647 | 5.928933 | 1.0000000 |
| 381644 | ENSMUSG00000036403 | Cep135 | centrosomal protein 135 | synonymous_variant | 24 | chr5 | 76.58870 | 76.64647 | 5.928933 | 1.0000000 |
| 381644 | ENSMUSG00000036403 | Cep135 | centrosomal protein 135 | intron_variant | 16 | chr5 | 76.58870 | 76.64647 | 5.928933 | 1.0000000 |
| 381644 | ENSMUSG00000036403 | Cep135 | centrosomal protein 135 | 3_prime_UTR_variant | 38 | chr5 | 76.58870 | 76.64647 | 5.928933 | 1.0000000 |
| 381644 | ENSMUSG00000036403 | Cep135 | centrosomal protein 135 | downstream_gene_variant | 32 | chr5 | 76.58870 | 76.64647 | 5.928933 | 1.0000000 |
| 381644 | ENSMUSG00000036403 | Cep135 | centrosomal protein 135 | non_coding_transcript_variant | 62 | chr5 | 76.58870 | 76.64647 | 5.928933 | 1.0000000 |
| 381644 | ENSMUSG00000036403 | Cep135 | centrosomal protein 135 | missense_variant | 6 | chr5 | 76.58870 | 76.64647 | 5.928933 | 1.0000000 |
| 384185 | ENSMUSG00000063820 | Arl9 | ADP-ribosylation factor-like 9 | synonymous_variant | 1 | chr5 | 77.00405 | 77.01061 | 2.468474 | 1.0000000 |
| 384185 | ENSMUSG00000063820 | Arl9 | ADP-ribosylation factor-like 9 | upstream_gene_variant | 24 | chr5 | 77.00405 | 77.01061 | 2.468474 | 1.0000000 |
| 384185 | ENSMUSG00000063820 | Arl9 | ADP-ribosylation factor-like 9 | intron_variant | 4 | chr5 | 77.00405 | 77.01061 | 2.468474 | 1.0000000 |
| 384185 | ENSMUSG00000063820 | Arl9 | ADP-ribosylation factor-like 9 | upstream_gene_variant | 1 | chr5 | 77.00405 | 77.01061 | 2.468474 | 1.0000000 |
| 384185 | ENSMUSG00000063820 | Arl9 | ADP-ribosylation factor-like 9 | missense_variant | 1 | chr5 | 77.00405 | 77.01061 | 2.468474 | 1.0000000 |
| 384185 | ENSMUSG00000063820 | Arl9 | ADP-ribosylation factor-like 9 | downstream_gene_variant | 1 | chr5 | 77.00405 | 77.01061 | 2.468474 | 1.0000000 |
| 384185 | ENSMUSG00000063820 | Arl9 | ADP-ribosylation factor-like 9 | synonymous_variant | 2 | chr5 | 77.00405 | 77.01061 | 2.468474 | 1.0000000 |
| 435845 | ENSMUSG00000061184 | Tmprss11c | transmembrane protease, serine 11c | missense_variant | 1 | chr5 | 86.23148 | 86.28931 | 2.465531 | 1.0000000 |
| 435845 | ENSMUSG00000061184 | Tmprss11c | transmembrane protease, serine 11c | synonymous_variant | 5 | chr5 | 86.23148 | 86.28931 | 2.465531 | 1.0000000 |
| 435845 | ENSMUSG00000061184 | Tmprss11c | transmembrane protease, serine 11c | 3_prime_UTR_variant | 2 | chr5 | 86.23148 | 86.28931 | 2.465531 | 1.0000000 |
| 52822 | ENSMUSG00000029291 | Rufy3 | RUN and FYVE domain containing 3 | 3_prime_UTR_variant | 30 | chr5 | 88.56504 | 88.65139 | 6.092990 | 1.0000000 |
| 52822 | ENSMUSG00000029291 | Rufy3 | RUN and FYVE domain containing 3 | 5_prime_UTR_variant | 10 | chr5 | 88.56504 | 88.65139 | 6.092990 | 1.0000000 |
| 52822 | ENSMUSG00000029291 | Rufy3 | RUN and FYVE domain containing 3 | missense_variant | 1 | chr5 | 88.56504 | 88.65139 | 6.092990 | 1.0000000 |
| 52822 | ENSMUSG00000029291 | Rufy3 | RUN and FYVE domain containing 3 | synonymous_variant | 14 | chr5 | 88.56504 | 88.65139 | 6.092990 | 1.0000000 |
| 52822 | ENSMUSG00000029291 | Rufy3 | RUN and FYVE domain containing 3 | downstream_gene_variant | 9 | chr5 | 88.56504 | 88.65139 | 6.092990 | 1.0000000 |
| 52822 | ENSMUSG00000029291 | Rufy3 | RUN and FYVE domain containing 3 | upstream_gene_variant | 2 | chr5 | 88.56504 | 88.65139 | 6.092990 | 1.0000000 |
| 52822 | ENSMUSG00000029291 | Rufy3 | RUN and FYVE domain containing 3 | intron_variant | 32 | chr5 | 88.56504 | 88.65139 | 6.092990 | 1.0000000 |
| 53315 | ENSMUSG00000029273 | Sult1d1 | sulfotransferase family 1D, member 1 | 3_prime_UTR_variant | 2 | chr5 | 87.55464 | 87.56903 | 4.495790 | 1.0000000 |
| 53315 | ENSMUSG00000029273 | Sult1d1 | sulfotransferase family 1D, member 1 | downstream_gene_variant | 2 | chr5 | 87.55464 | 87.56903 | 4.495790 | 1.0000000 |
| 53315 | ENSMUSG00000029273 | Sult1d1 | sulfotransferase family 1D, member 1 | 5_prime_UTR_variant | 7 | chr5 | 87.55464 | 87.56903 | 4.495790 | 1.0000000 |
| 53315 | ENSMUSG00000029273 | Sult1d1 | sulfotransferase family 1D, member 1 | synonymous_variant | 1 | chr5 | 87.55464 | 87.56903 | 4.495790 | 1.0000000 |
| 53315 | ENSMUSG00000029273 | Sult1d1 | sulfotransferase family 1D, member 1 | upstream_gene_variant | 1 | chr5 | 87.55464 | 87.56903 | 4.495790 | 1.0000000 |
| 54403 | ENSMUSG00000060961 | Slc4a4 | solute carrier family 4 (anion exchanger), member 4 | non_coding_transcript_exon_variant | 5 | chr5 | 88.88682 | 89.23965 | 6.256533 | 1.0000000 |
| 54403 | ENSMUSG00000060961 | Slc4a4 | solute carrier family 4 (anion exchanger), member 4 | 5_prime_UTR_variant | 12 | chr5 | 88.88682 | 89.23965 | 6.256533 | 1.0000000 |
| 54403 | ENSMUSG00000060961 | Slc4a4 | solute carrier family 4 (anion exchanger), member 4 | non_coding_transcript_variant | 5 | chr5 | 88.88682 | 89.23965 | 6.256533 | 1.0000000 |
| 54403 | ENSMUSG00000060961 | Slc4a4 | solute carrier family 4 (anion exchanger), member 4 | upstream_gene_variant | 5 | chr5 | 88.88682 | 89.23965 | 6.256533 | 1.0000000 |
| 54403 | ENSMUSG00000060961 | Slc4a4 | solute carrier family 4 (anion exchanger), member 4 | 3_prime_UTR_variant | 50 | chr5 | 88.88682 | 89.23965 | 6.256533 | 1.0000000 |
| 54403 | ENSMUSG00000060961 | Slc4a4 | solute carrier family 4 (anion exchanger), member 4 | intron_variant | 24 | chr5 | 88.88682 | 89.23965 | 6.256533 | 1.0000000 |
| 54403 | ENSMUSG00000060961 | Slc4a4 | solute carrier family 4 (anion exchanger), member 4 | synonymous_variant | 25 | chr5 | 88.88682 | 89.23965 | 6.256533 | 1.0000000 |
| 54403 | ENSMUSG00000060961 | Slc4a4 | solute carrier family 4 (anion exchanger), member 4 | downstream_gene_variant | 32 | chr5 | 88.88682 | 89.23965 | 6.256533 | 1.0000000 |
| 552899 | ENSMUSG00000029268 | Ugt2a2 | UDP glucuronosyltransferase 2 family, polypeptide A2 | 3_prime_UTR_variant | 12 | chr5 | 87.45949 | 87.48226 | 3.547209 | 1.0000000 |
| 552899 | ENSMUSG00000029268 | Ugt2a2 | UDP glucuronosyltransferase 2 family, polypeptide A2 | downstream_gene_variant | 12 | chr5 | 87.45949 | 87.48226 | 3.547209 | 1.0000000 |
| 552899 | ENSMUSG00000029268 | Ugt2a2 | UDP glucuronosyltransferase 2 family, polypeptide A2 | synonymous_variant | 21 | chr5 | 87.45949 | 87.48226 | 3.547209 | 1.0000000 |
| 552899 | ENSMUSG00000029268 | Ugt2a2 | UDP glucuronosyltransferase 2 family, polypeptide A2 | intron_variant | 3 | chr5 | 87.45949 | 87.48226 | 3.547209 | 1.0000000 |
| 552899 | ENSMUSG00000029268 | Ugt2a2 | UDP glucuronosyltransferase 2 family, polypeptide A2 | intron_variant | 4 | chr5 | 87.45949 | 87.48226 | 3.547209 | 1.0000000 |
| 552899 | ENSMUSG00000029268 | Ugt2a2 | UDP glucuronosyltransferase 2 family, polypeptide A2 | missense_variant | 1 | chr5 | 87.45949 | 87.48226 | 3.547209 | 1.0000000 |
| 552899 | ENSMUSG00000029268 | Ugt2a2 | UDP glucuronosyltransferase 2 family, polypeptide A2 | upstream_gene_variant | 23 | chr5 | 87.45949 | 87.48226 | 3.547209 | 1.0000000 |
| 552899 | ENSMUSG00000029268 | Ugt2a2 | UDP glucuronosyltransferase 2 family, polypeptide A2 | synonymous_variant | 12 | chr5 | 87.45949 | 87.48226 | 3.547209 | 1.0000000 |
| 552899 | ENSMUSG00000029268 | Ugt2a2 | UDP glucuronosyltransferase 2 family, polypeptide A2 | missense_variant | 3 | chr5 | 87.45949 | 87.48226 | 3.547209 | 1.0000000 |
| 552899 | ENSMUSG00000029268 | Ugt2a2 | UDP glucuronosyltransferase 2 family, polypeptide A2 | 5_prime_UTR_variant | 4 | chr5 | 87.45949 | 87.48226 | 3.547209 | 1.0000000 |
| 552899 | ENSMUSG00000029268 | Ugt2a2 | UDP glucuronosyltransferase 2 family, polypeptide A2 | splice_region_variant | 1 | chr5 | 87.45949 | 87.48226 | 3.547209 | 1.0000000 |
| 56183 | ENSMUSG00000029236 | Nmu | neuromedin U | missense_variant | 2 | chr5 | 76.33349 | 76.36379 | 3.663415 | 1.0000000 |
| 56183 | ENSMUSG00000029236 | Nmu | neuromedin U | 3_prime_UTR_variant | 2 | chr5 | 76.33349 | 76.36379 | 3.663415 | 1.0000000 |
| 56183 | ENSMUSG00000029236 | Nmu | neuromedin U | intron_variant | 3 | chr5 | 76.33349 | 76.36379 | 3.663415 | 1.0000000 |
| 56183 | ENSMUSG00000029236 | Nmu | neuromedin U | synonymous_variant | 2 | chr5 | 76.33349 | 76.36379 | 3.663415 | 1.0000000 |
| 56183 | ENSMUSG00000029236 | Nmu | neuromedin U | 5_prime_UTR_variant | 2 | chr5 | 76.33349 | 76.36379 | 3.663415 | 1.0000000 |
| 56183 | ENSMUSG00000029236 | Nmu | neuromedin U | downstream_gene_variant | 4 | chr5 | 76.33349 | 76.36379 | 3.663415 | 1.0000000 |
| 56362 | ENSMUSG00000029269 | Sult1b1 | sulfotransferase family 1B, member 1 | downstream_gene_variant | 50 | chr5 | 87.51334 | 87.53820 | 2.327242 | 1.0000000 |
| 56362 | ENSMUSG00000029269 | Sult1b1 | sulfotransferase family 1B, member 1 | intron_variant | 2 | chr5 | 87.51334 | 87.53820 | 2.327242 | 1.0000000 |
| 56362 | ENSMUSG00000029269 | Sult1b1 | sulfotransferase family 1B, member 1 | synonymous_variant | 2 | chr5 | 87.51334 | 87.53820 | 2.327242 | 1.0000000 |
| 56362 | ENSMUSG00000029269 | Sult1b1 | sulfotransferase family 1B, member 1 | missense_variant | 3 | chr5 | 87.51334 | 87.53820 | 2.327242 | 1.0000000 |
| 56362 | ENSMUSG00000029269 | Sult1b1 | sulfotransferase family 1B, member 1 | 3_prime_UTR_variant | 65 | chr5 | 87.51334 | 87.53820 | 2.327242 | 1.0000000 |
| 56362 | ENSMUSG00000029269 | Sult1b1 | sulfotransferase family 1B, member 1 | upstream_gene_variant | 2 | chr5 | 87.51334 | 87.53820 | 2.327242 | 1.0000000 |
| 56362 | ENSMUSG00000029269 | Sult1b1 | sulfotransferase family 1B, member 1 | 5_prime_UTR_variant | 3 | chr5 | 87.51334 | 87.53820 | 2.327242 | 1.0000000 |
| 56412 | ENSMUSG00000036285 | Noa1 | nitric oxide associated 1 | missense_variant | 30 | chr5 | 77.29418 | 77.31008 | 5.327575 | 1.0000000 |
| 56412 | ENSMUSG00000036285 | Noa1 | nitric oxide associated 1 | non_coding_transcript_exon_variant | 77 | chr5 | 77.29418 | 77.31008 | 5.327575 | 1.0000000 |
| 56412 | ENSMUSG00000036285 | Noa1 | nitric oxide associated 1 | synonymous_variant | 27 | chr5 | 77.29418 | 77.31008 | 5.327575 | 1.0000000 |
| 56412 | ENSMUSG00000036285 | Noa1 | nitric oxide associated 1 | upstream_gene_variant | 74 | chr5 | 77.29418 | 77.31008 | 5.327575 | 1.0000000 |
| 56412 | ENSMUSG00000036285 | Noa1 | nitric oxide associated 1 | downstream_gene_variant | 10 | chr5 | 77.29418 | 77.31008 | 5.327575 | 1.0000000 |
| 56412 | ENSMUSG00000036285 | Noa1 | nitric oxide associated 1 | upstream_gene_variant | 20 | chr5 | 77.29418 | 77.31008 | 5.327575 | 1.0000000 |
| 56412 | ENSMUSG00000036285 | Noa1 | nitric oxide associated 1 | intron_variant | 27 | chr5 | 77.29418 | 77.31008 | 5.327575 | 1.0000000 |
| 56412 | ENSMUSG00000036285 | Noa1 | nitric oxide associated 1 | non_coding_transcript_variant | 77 | chr5 | 77.29418 | 77.31008 | 5.327575 | 1.0000000 |
| 56744 | ENSMUSG00000029373 | Pf4 | platelet factor 4 | 3_prime_UTR_variant | 2 | chr5 | 90.77244 | 90.77338 | 4.942698 | 1.0000000 |
| 56744 | ENSMUSG00000029373 | Pf4 | platelet factor 4 | upstream_gene_variant | 14 | chr5 | 90.77244 | 90.77338 | 4.942698 | 1.0000000 |
| 56744 | ENSMUSG00000029373 | Pf4 | platelet factor 4 | intron_variant | 3 | chr5 | 90.77244 | 90.77338 | 4.942698 | 1.0000000 |
| 56744 | ENSMUSG00000029373 | Pf4 | platelet factor 4 | synonymous_variant | 2 | chr5 | 90.77244 | 90.77338 | 4.942698 | 1.0000000 |
| 56744 | ENSMUSG00000029373 | Pf4 | platelet factor 4 | 5_prime_UTR_variant | 5 | chr5 | 90.77244 | 90.77338 | 4.942698 | 1.0000000 |
| 56792 | ENSMUSG00000029254 | Stap1 | signal transducing adaptor family member 1 | 5_prime_UTR_variant | 13 | chr5 | 86.07175 | 86.10613 | 5.548088 | 1.0000000 |
| 56792 | ENSMUSG00000029254 | Stap1 | signal transducing adaptor family member 1 | upstream_gene_variant | 26 | chr5 | 86.07175 | 86.10613 | 5.548088 | 1.0000000 |
| 56792 | ENSMUSG00000029254 | Stap1 | signal transducing adaptor family member 1 | non_coding_transcript_variant | 52 | chr5 | 86.07175 | 86.10613 | 5.548088 | 1.0000000 |
| 56792 | ENSMUSG00000029254 | Stap1 | signal transducing adaptor family member 1 | synonymous_variant | 5 | chr5 | 86.07175 | 86.10613 | 5.548088 | 1.0000000 |
| 56792 | ENSMUSG00000029254 | Stap1 | signal transducing adaptor family member 1 | non_coding_transcript_exon_variant | 52 | chr5 | 86.07175 | 86.10613 | 5.548088 | 1.0000000 |
| 56792 | ENSMUSG00000029254 | Stap1 | signal transducing adaptor family member 1 | missense_variant | 2 | chr5 | 86.07175 | 86.10613 | 5.548088 | 1.0000000 |
| 56792 | ENSMUSG00000029254 | Stap1 | signal transducing adaptor family member 1 | intron_variant | 32 | chr5 | 86.07175 | 86.10613 | 5.548088 | 1.0000000 |
| 56792 | ENSMUSG00000029254 | Stap1 | signal transducing adaptor family member 1 | downstream_gene_variant | 32 | chr5 | 86.07175 | 86.10613 | 5.548088 | 1.0000000 |
| 57349 | ENSMUSG00000029372 | Ppbp | pro-platelet basic protein | 5_prime_UTR_variant | 1 | chr5 | 90.76852 | 90.77006 | 6.424546 | 1.0000000 |
| 57349 | ENSMUSG00000029372 | Ppbp | pro-platelet basic protein | downstream_gene_variant | 12 | chr5 | 90.76852 | 90.77006 | 6.424546 | 1.0000000 |
| 57349 | ENSMUSG00000029372 | Ppbp | pro-platelet basic protein | synonymous_variant | 2 | chr5 | 90.76852 | 90.77006 | 6.424546 | 1.0000000 |
| 57349 | ENSMUSG00000029372 | Ppbp | pro-platelet basic protein | 3_prime_UTR_variant | 11 | chr5 | 90.76852 | 90.77006 | 6.424546 | 1.0000000 |
| 57357 | ENSMUSG00000029233 | Srd5a3 | steroid 5 alpha-reductase 3 | 5_prime_UTR_variant | 24 | chr5 | 76.14027 | 76.15550 | 6.832440 | 1.0000000 |
| 57357 | ENSMUSG00000029233 | Srd5a3 | steroid 5 alpha-reductase 3 | non_coding_transcript_exon_variant | 135 | chr5 | 76.14027 | 76.15550 | 6.832440 | 1.0000000 |
| 57357 | ENSMUSG00000029233 | Srd5a3 | steroid 5 alpha-reductase 3 | splice_region_variant | 6 | chr5 | 76.14027 | 76.15550 | 6.832440 | 1.0000000 |
| 57357 | ENSMUSG00000029233 | Srd5a3 | steroid 5 alpha-reductase 3 | 3_prime_UTR_variant | 36 | chr5 | 76.14027 | 76.15550 | 6.832440 | 1.0000000 |
| 57357 | ENSMUSG00000029233 | Srd5a3 | steroid 5 alpha-reductase 3 | intron_variant | 82 | chr5 | 76.14027 | 76.15550 | 6.832440 | 1.0000000 |
| 57357 | ENSMUSG00000029233 | Srd5a3 | steroid 5 alpha-reductase 3 | non_coding_transcript_variant | 150 | chr5 | 76.14027 | 76.15550 | 6.832440 | 1.0000000 |
| 57357 | ENSMUSG00000029233 | Srd5a3 | steroid 5 alpha-reductase 3 | synonymous_variant | 18 | chr5 | 76.14027 | 76.15550 | 6.832440 | 1.0000000 |
| 57357 | ENSMUSG00000029233 | Srd5a3 | steroid 5 alpha-reductase 3 | upstream_gene_variant | 72 | chr5 | 76.14027 | 76.15550 | 6.832440 | 1.0000000 |
| 57357 | ENSMUSG00000029233 | Srd5a3 | steroid 5 alpha-reductase 3 | downstream_gene_variant | 121 | chr5 | 76.14027 | 76.15550 | 6.832440 | 1.0000000 |
| 57357 | ENSMUSG00000029233 | Srd5a3 | steroid 5 alpha-reductase 3 | missense_variant | 12 | chr5 | 76.14027 | 76.15550 | 6.832440 | 1.0000000 |
| 622307 | ENSMUSG00000070690 | Albfm1 | albumin superfamily member 1 | splice_region_variant | 3 | chr5 | 90.56111 | 90.59787 | 2.549181 | 1.0000000 |
| 622307 | ENSMUSG00000070690 | Albfm1 | albumin superfamily member 1 | 3_prime_UTR_variant | 1 | chr5 | 90.56111 | 90.59787 | 2.549181 | 1.0000000 |
| 622307 | ENSMUSG00000070690 | Albfm1 | albumin superfamily member 1 | upstream_gene_variant | 2 | chr5 | 90.56111 | 90.59787 | 2.549181 | 1.0000000 |
| 622307 | ENSMUSG00000070690 | Albfm1 | albumin superfamily member 1 | intron_variant | 16 | chr5 | 90.56111 | 90.59787 | 2.549181 | 1.0000000 |
| 622307 | ENSMUSG00000070690 | Albfm1 | albumin superfamily member 1 | synonymous_variant | 6 | chr5 | 90.56111 | 90.59787 | 2.549181 | 1.0000000 |
| 622307 | ENSMUSG00000070690 | Albfm1 | albumin superfamily member 1 | missense_variant | 19 | chr5 | 90.56111 | 90.59787 | 2.549181 | 1.0000000 |
| 639545 | ENSMUSG00000091204 | Gm7271 | predicted gene 7271 | upstream_gene_variant | 5 | chr5 | 76.48404 | 76.51665 | 2.654522 | 1.0000000 |
| 639545 | ENSMUSG00000091204 | Gm7271 | predicted gene 7271 | non_coding_transcript_exon_variant | 13 | chr5 | 76.48404 | 76.51665 | 2.654522 | 1.0000000 |
| 639545 | ENSMUSG00000091204 | Gm7271 | predicted gene 7271 | non_coding_transcript_variant | 13 | chr5 | 76.48404 | 76.51665 | 2.654522 | 1.0000000 |
| 654494 | ENSMUSG00000067156 | Gm7337 | DAZ interacting protein 1 pseudogene | non_coding_transcript_exon_variant | 71 | chr5 | 87.85036 | 87.85301 | 4.879604 | 1.0000000 |
| 654494 | ENSMUSG00000067156 | Gm7337 | DAZ interacting protein 1 pseudogene | downstream_gene_variant | 31 | chr5 | 87.85036 | 87.85301 | 4.879604 | 1.0000000 |
| 654494 | ENSMUSG00000067156 | Gm7337 | DAZ interacting protein 1 pseudogene | non_coding_transcript_variant | 71 | chr5 | 87.85036 | 87.85301 | 4.879604 | 1.0000000 |
| 654494 | ENSMUSG00000067156 | Gm7337 | DAZ interacting protein 1 pseudogene | upstream_gene_variant | 2 | chr5 | 87.85036 | 87.85301 | 4.879604 | 1.0000000 |
| 65961 | ENSMUSG00000070697 | Utp3 | UTP3 small subunit processome component | upstream_gene_variant | 1 | chr5 | 88.55446 | 88.55609 | 5.060114 | 1.0000000 |
| 65961 | ENSMUSG00000070697 | Utp3 | UTP3 small subunit processome component | missense_variant | 2 | chr5 | 88.55446 | 88.55609 | 5.060114 | 1.0000000 |
| 65961 | ENSMUSG00000070697 | Utp3 | UTP3 small subunit processome component | 5_prime_UTR_variant | 1 | chr5 | 88.55446 | 88.55609 | 5.060114 | 1.0000000 |
| 65961 | ENSMUSG00000070697 | Utp3 | UTP3 small subunit processome component | synonymous_variant | 2 | chr5 | 88.55446 | 88.55609 | 5.060114 | 1.0000000 |
| 665055 | ENSMUSG00000098449 | Gm7467 | predicted gene 7467 | non_coding_transcript_variant | 11 | chr5 | 76.30488 | 76.30553 | 3.447665 | 1.0000000 |
| 665055 | ENSMUSG00000098449 | Gm7467 | predicted gene 7467 | upstream_gene_variant | 2 | chr5 | 76.30488 | 76.30553 | 3.447665 | 1.0000000 |
| 665055 | ENSMUSG00000098449 | Gm7467 | predicted gene 7467 | non_coding_transcript_exon_variant | 11 | chr5 | 76.30488 | 76.30553 | 3.447665 | 1.0000000 |
| 665563 | ENSMUSG00000029376 | Mthfd2l | methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like | missense_variant | 7 | chr5 | 90.93112 | 91.02137 | 5.591798 | 1.0000000 |
| 665563 | ENSMUSG00000029376 | Mthfd2l | methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like | upstream_gene_variant | 1 | chr5 | 90.93112 | 91.02137 | 5.591798 | 1.0000000 |
| 665563 | ENSMUSG00000029376 | Mthfd2l | methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like | intron_variant | 67 | chr5 | 90.93112 | 91.02137 | 5.591798 | 1.0000000 |
| 665563 | ENSMUSG00000029376 | Mthfd2l | methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like | 5_prime_UTR_variant | 1 | chr5 | 90.93112 | 91.02137 | 5.591798 | 1.0000000 |
| 665563 | ENSMUSG00000029376 | Mthfd2l | methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like | 3_prime_UTR_variant | 20 | chr5 | 90.93112 | 91.02137 | 5.591798 | 1.0000000 |
| 665563 | ENSMUSG00000029376 | Mthfd2l | methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like | synonymous_variant | 14 | chr5 | 90.93112 | 91.02137 | 5.591798 | 1.0000000 |
| 665563 | ENSMUSG00000029376 | Mthfd2l | methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like | splice_region_variant | 2 | chr5 | 90.93112 | 91.02137 | 5.591798 | 1.0000000 |
| 665615 | ENSMUSG00000090302 | Gm7714 | predicted gene 7714 | missense_variant | 3 | chr5 | 88.26892 | 88.28284 | 3.602418 | 1.0000000 |
| 665615 | ENSMUSG00000090302 | Gm7714 | predicted gene 7714 | 5_prime_UTR_variant | 4 | chr5 | 88.26892 | 88.28284 | 3.602418 | 1.0000000 |
| 66661 | ENSMUSG00000036323 | Srp72 | signal recognition particle 72 | synonymous_variant | 18 | chr5 | 76.97468 | 76.99994 | 8.071574 | 1.0000000 |
| 66661 | ENSMUSG00000036323 | Srp72 | signal recognition particle 72 | splice_region_variant | 1 | chr5 | 76.97468 | 76.99994 | 8.071574 | 1.0000000 |
| 66661 | ENSMUSG00000036323 | Srp72 | signal recognition particle 72 | downstream_gene_variant | 1 | chr5 | 76.97468 | 76.99994 | 8.071574 | 1.0000000 |
| 66661 | ENSMUSG00000036323 | Srp72 | signal recognition particle 72 | upstream_gene_variant | 39 | chr5 | 76.97468 | 76.99994 | 8.071574 | 1.0000000 |
| 66661 | ENSMUSG00000036323 | Srp72 | signal recognition particle 72 | missense_variant | 5 | chr5 | 76.97468 | 76.99994 | 8.071574 | 1.0000000 |
| 66661 | ENSMUSG00000036323 | Srp72 | signal recognition particle 72 | intron_variant | 42 | chr5 | 76.97468 | 76.99994 | 8.071574 | 1.0000000 |
| 66661 | ENSMUSG00000036323 | Srp72 | signal recognition particle 72 | non_coding_transcript_variant | 89 | chr5 | 76.97468 | 76.99994 | 8.071574 | 1.0000000 |
| 66661 | ENSMUSG00000036323 | Srp72 | signal recognition particle 72 | 3_prime_UTR_variant | 30 | chr5 | 76.97468 | 76.99994 | 8.071574 | 1.0000000 |
| 66661 | ENSMUSG00000036323 | Srp72 | signal recognition particle 72 | non_coding_transcript_exon_variant | 89 | chr5 | 76.97468 | 76.99994 | 8.071574 | 1.0000000 |
| 66661 | ENSMUSG00000036323 | Srp72 | signal recognition particle 72 | downstream_gene_variant | 82 | chr5 | 76.97468 | 76.99994 | 8.071574 | 1.0000000 |
| 67054 | ENSMUSG00000029247 | Paics | phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase | 5_prime_UTR_variant | 7 | chr5 | 76.95131 | 76.96751 | 6.369434 | 1.0000000 |
| 67054 | ENSMUSG00000029247 | Paics | phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase | upstream_gene_variant | 21 | chr5 | 76.95131 | 76.96751 | 6.369434 | 1.0000000 |
| 67054 | ENSMUSG00000029247 | Paics | phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase | missense_variant | 1 | chr5 | 76.95131 | 76.96751 | 6.369434 | 1.0000000 |
| 67054 | ENSMUSG00000029247 | Paics | phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase | NMD_transcript_variant | 10 | chr5 | 76.95131 | 76.96751 | 6.369434 | 1.0000000 |
| 67054 | ENSMUSG00000029247 | Paics | phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase | splice_region_variant | 2 | chr5 | 76.95131 | 76.96751 | 6.369434 | 1.0000000 |
| 67054 | ENSMUSG00000029247 | Paics | phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase | synonymous_variant | 9 | chr5 | 76.95131 | 76.96751 | 6.369434 | 1.0000000 |
| 67054 | ENSMUSG00000029247 | Paics | phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase | downstream_gene_variant | 22 | chr5 | 76.95131 | 76.96751 | 6.369434 | 1.0000000 |
| 67054 | ENSMUSG00000029247 | Paics | phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase | non_coding_transcript_variant | 4 | chr5 | 76.95131 | 76.96751 | 6.369434 | 1.0000000 |
| 67054 | ENSMUSG00000029247 | Paics | phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase | intron_variant | 7 | chr5 | 76.95131 | 76.96751 | 6.369434 | 1.0000000 |
| 67054 | ENSMUSG00000029247 | Paics | phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase | intron_variant | 2 | chr5 | 76.95131 | 76.96751 | 6.369434 | 1.0000000 |
| 67054 | ENSMUSG00000029247 | Paics | phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase | 5_prime_UTR_variant | 8 | chr5 | 76.95131 | 76.96751 | 6.369434 | 1.0000000 |
| 67054 | ENSMUSG00000029247 | Paics | phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase | 3_prime_UTR_variant | 18 | chr5 | 76.95131 | 76.96751 | 6.369434 | 1.0000000 |
| 67054 | ENSMUSG00000029247 | Paics | phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase | upstream_gene_variant | 12 | chr5 | 76.95131 | 76.96751 | 6.369434 | 1.0000000 |
| 67054 | ENSMUSG00000029247 | Paics | phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase | non_coding_transcript_exon_variant | 4 | chr5 | 76.95131 | 76.96751 | 6.369434 | 1.0000000 |
| 67327 | ENSMUSG00000099863 | 1700031L13Rik | RIKEN cDNA 1700031L13 gene | downstream_gene_variant | 9 | chr5 | 82.12241 | 82.12471 | 2.243651 | 1.0000000 |
| 67327 | ENSMUSG00000099863 | 1700031L13Rik | RIKEN cDNA 1700031L13 gene | intron_variant | 2 | chr5 | 82.12241 | 82.12471 | 2.243651 | 1.0000000 |
| 67327 | ENSMUSG00000099863 | 1700031L13Rik | RIKEN cDNA 1700031L13 gene | non_coding_transcript_variant | 27 | chr5 | 82.12241 | 82.12471 | 2.243651 | 1.0000000 |
| 67327 | ENSMUSG00000099863 | 1700031L13Rik | RIKEN cDNA 1700031L13 gene | non_coding_transcript_exon_variant | 27 | chr5 | 82.12241 | 82.12471 | 2.243651 | 1.0000000 |
| 68246 | ENSMUSG00000086632 | 1700112J05Rik | RIKEN cDNA 1700112J05 gene | non_coding_transcript_exon_variant | 7 | chr5 | 77.00645 | 77.01886 | 2.802538 | 1.0000000 |
| 68246 | ENSMUSG00000086632 | 1700112J05Rik | RIKEN cDNA 1700112J05 gene | downstream_gene_variant | 1 | chr5 | 77.00645 | 77.01886 | 2.802538 | 1.0000000 |
| 68246 | ENSMUSG00000086632 | 1700112J05Rik | RIKEN cDNA 1700112J05 gene | non_coding_transcript_variant | 7 | chr5 | 77.00645 | 77.01886 | 2.802538 | 1.0000000 |
| 68246 | ENSMUSG00000086632 | 1700112J05Rik | RIKEN cDNA 1700112J05 gene | non_coding_transcript_variant | 2 | chr5 | 77.00645 | 77.01886 | 2.802538 | 1.0000000 |
| 68246 | ENSMUSG00000086632 | 1700112J05Rik | RIKEN cDNA 1700112J05 gene | non_coding_transcript_exon_variant | 1 | chr5 | 77.00645 | 77.01886 | 2.802538 | 1.0000000 |
| 68246 | ENSMUSG00000086632 | 1700112J05Rik | RIKEN cDNA 1700112J05 gene | non_coding_transcript_variant | 5 | chr5 | 77.00645 | 77.01886 | 2.802538 | 1.0000000 |
| 68246 | ENSMUSG00000086632 | 1700112J05Rik | RIKEN cDNA 1700112J05 gene | intron_variant | 5 | chr5 | 77.00645 | 77.01886 | 2.802538 | 1.0000000 |
| 68246 | ENSMUSG00000086632 | 1700112J05Rik | RIKEN cDNA 1700112J05 gene | intron_variant | 1 | chr5 | 77.00645 | 77.01886 | 2.802538 | 1.0000000 |
| 68473 | ENSMUSG00000006262 | Mob1b | MOB kinase activator 1B | synonymous_variant | 4 | chr5 | 88.72086 | 88.76422 | 6.975139 | 1.0000000 |
| 68473 | ENSMUSG00000006262 | Mob1b | MOB kinase activator 1B | downstream_gene_variant | 78 | chr5 | 88.72086 | 88.76422 | 6.975139 | 1.0000000 |
| 68473 | ENSMUSG00000006262 | Mob1b | MOB kinase activator 1B | non_coding_transcript_variant | 45 | chr5 | 88.72086 | 88.76422 | 6.975139 | 1.0000000 |
| 68473 | ENSMUSG00000006262 | Mob1b | MOB kinase activator 1B | 3_prime_UTR_variant | 55 | chr5 | 88.72086 | 88.76422 | 6.975139 | 1.0000000 |
| 68473 | ENSMUSG00000006262 | Mob1b | MOB kinase activator 1B | non_coding_transcript_exon_variant | 32 | chr5 | 88.72086 | 88.76422 | 6.975139 | 1.0000000 |
| 68473 | ENSMUSG00000006262 | Mob1b | MOB kinase activator 1B | 5_prime_UTR_variant | 3 | chr5 | 88.72086 | 88.76422 | 6.975139 | 1.0000000 |
| 68473 | ENSMUSG00000006262 | Mob1b | MOB kinase activator 1B | downstream_gene_variant | 5 | chr5 | 88.72086 | 88.76422 | 6.975139 | 1.0000000 |
| 68473 | ENSMUSG00000006262 | Mob1b | MOB kinase activator 1B | upstream_gene_variant | 3 | chr5 | 88.72086 | 88.76422 | 6.975139 | 1.0000000 |
| 68473 | ENSMUSG00000006262 | Mob1b | MOB kinase activator 1B | intron_variant | 38 | chr5 | 88.72086 | 88.76422 | 6.975139 | 1.0000000 |
| 69592 | ENSMUSG00000009580 | Odam | odontogenic, ameloblast asssociated | downstream_gene_variant | 17 | chr5 | 87.88503 | 87.89417 | 2.189613 | 1.0000000 |
| 69592 | ENSMUSG00000009580 | Odam | odontogenic, ameloblast asssociated | missense_variant | 5 | chr5 | 87.88503 | 87.89417 | 2.189613 | 1.0000000 |
| 69592 | ENSMUSG00000009580 | Odam | odontogenic, ameloblast asssociated | 3_prime_UTR_variant | 17 | chr5 | 87.88503 | 87.89417 | 2.189613 | 1.0000000 |
| 69592 | ENSMUSG00000009580 | Odam | odontogenic, ameloblast asssociated | synonymous_variant | 8 | chr5 | 87.88503 | 87.89417 | 2.189613 | 1.0000000 |
| 69940 | ENSMUSG00000036435 | Exoc1 | exocyst complex component 1 | missense_variant | 2 | chr5 | 76.52931 | 76.57029 | 6.837025 | 1.0000000 |
| 69940 | ENSMUSG00000036435 | Exoc1 | exocyst complex component 1 | 3_prime_UTR_variant | 48 | chr5 | 76.52931 | 76.57029 | 6.837025 | 1.0000000 |
| 69940 | ENSMUSG00000036435 | Exoc1 | exocyst complex component 1 | non_coding_transcript_exon_variant | 218 | chr5 | 76.52931 | 76.57029 | 6.837025 | 1.0000000 |
| 69940 | ENSMUSG00000036435 | Exoc1 | exocyst complex component 1 | downstream_gene_variant | 83 | chr5 | 76.52931 | 76.57029 | 6.837025 | 1.0000000 |
| 69940 | ENSMUSG00000036435 | Exoc1 | exocyst complex component 1 | upstream_gene_variant | 136 | chr5 | 76.52931 | 76.57029 | 6.837025 | 1.0000000 |
| 69940 | ENSMUSG00000036435 | Exoc1 | exocyst complex component 1 | intron_variant | 163 | chr5 | 76.52931 | 76.57029 | 6.837025 | 1.0000000 |
| 69940 | ENSMUSG00000036435 | Exoc1 | exocyst complex component 1 | synonymous_variant | 30 | chr5 | 76.52931 | 76.57029 | 6.837025 | 1.0000000 |
| 69940 | ENSMUSG00000036435 | Exoc1 | exocyst complex component 1 | splice_region_variant | 2 | chr5 | 76.52931 | 76.57029 | 6.837025 | 1.0000000 |
| 69940 | ENSMUSG00000036435 | Exoc1 | exocyst complex component 1 | non_coding_transcript_variant | 218 | chr5 | 76.52931 | 76.57029 | 6.837025 | 1.0000000 |
| 69940 | ENSMUSG00000036435 | Exoc1 | exocyst complex component 1 | 5_prime_UTR_variant | 1 | chr5 | 76.52931 | 76.57029 | 6.837025 | 1.0000000 |
| 69982 | ENSMUSG00000053030 | Spink2 | serine peptidase inhibitor, Kazal type 2 | synonymous_variant | 3 | chr5 | 77.20511 | 77.21147 | 2.710218 | 1.0000000 |
| 69982 | ENSMUSG00000053030 | Spink2 | serine peptidase inhibitor, Kazal type 2 | 5_prime_UTR_variant | 7 | chr5 | 77.20511 | 77.21147 | 2.710218 | 1.0000000 |
| 69982 | ENSMUSG00000053030 | Spink2 | serine peptidase inhibitor, Kazal type 2 | missense_variant | 3 | chr5 | 77.20511 | 77.21147 | 2.710218 | 1.0000000 |
| 69982 | ENSMUSG00000053030 | Spink2 | serine peptidase inhibitor, Kazal type 2 | 3_prime_UTR_variant | 10 | chr5 | 77.20511 | 77.21147 | 2.710218 | 1.0000000 |
| 69982 | ENSMUSG00000053030 | Spink2 | serine peptidase inhibitor, Kazal type 2 | intron_variant | 1 | chr5 | 77.20511 | 77.21147 | 2.710218 | 1.0000000 |
| 69982 | ENSMUSG00000053030 | Spink2 | serine peptidase inhibitor, Kazal type 2 | upstream_gene_variant | 8 | chr5 | 77.20511 | 77.21147 | 2.710218 | 1.0000000 |
| 70977 | ENSMUSG00000007907 | Cabs1 | calcium binding protein, spermatid specific 1 | missense_variant | 4 | chr5 | 87.97944 | 87.98154 | 3.139324 | 1.0000000 |
| 70977 | ENSMUSG00000007907 | Cabs1 | calcium binding protein, spermatid specific 1 | upstream_gene_variant | 1 | chr5 | 87.97944 | 87.98154 | 3.139324 | 1.0000000 |
| 70977 | ENSMUSG00000007907 | Cabs1 | calcium binding protein, spermatid specific 1 | synonymous_variant | 5 | chr5 | 87.97944 | 87.98154 | 3.139324 | 1.0000000 |
| 71421 | ENSMUSG00000029282 | Amtn | amelotin | 3_prime_UTR_variant | 4 | chr5 | 88.37611 | 88.38592 | 4.012269 | 1.0000000 |
| 71421 | ENSMUSG00000029282 | Amtn | amelotin | 5_prime_UTR_variant | 1 | chr5 | 88.37611 | 88.38592 | 4.012269 | 1.0000000 |
| 71421 | ENSMUSG00000029282 | Amtn | amelotin | missense_variant | 3 | chr5 | 88.37611 | 88.38592 | 4.012269 | 1.0000000 |
| 71421 | ENSMUSG00000029282 | Amtn | amelotin | synonymous_variant | 4 | chr5 | 88.37611 | 88.38592 | 4.012269 | 1.0000000 |
| 71421 | ENSMUSG00000029282 | Amtn | amelotin | splice_region_variant | 1 | chr5 | 88.37611 | 88.38592 | 4.012269 | 1.0000000 |
| 71773 | ENSMUSG00000035836 | Ugt2b1 | UDP glucuronosyltransferase 2 family, polypeptide B1 | synonymous_variant | 4 | chr5 | 86.91664 | 86.92653 | 2.590878 | 1.0000000 |
| 71773 | ENSMUSG00000035836 | Ugt2b1 | UDP glucuronosyltransferase 2 family, polypeptide B1 | missense_variant | 2 | chr5 | 86.91664 | 86.92653 | 2.590878 | 1.0000000 |
| 71773 | ENSMUSG00000035836 | Ugt2b1 | UDP glucuronosyltransferase 2 family, polypeptide B1 | 3_prime_UTR_variant | 18 | chr5 | 86.91664 | 86.92653 | 2.590878 | 1.0000000 |
| 71868 | ENSMUSG00000029248 | Thegl | theg spermatid protein like | 5_prime_UTR_variant | 4 | chr5 | 77.01602 | 77.06153 | 3.384552 | 1.0000000 |
| 71868 | ENSMUSG00000029248 | Thegl | theg spermatid protein like | missense_variant | 8 | chr5 | 77.01602 | 77.06153 | 3.384552 | 1.0000000 |
| 71868 | ENSMUSG00000029248 | Thegl | theg spermatid protein like | synonymous_variant | 5 | chr5 | 77.01602 | 77.06153 | 3.384552 | 1.0000000 |
| 71868 | ENSMUSG00000029248 | Thegl | theg spermatid protein like | 3_prime_UTR_variant | 2 | chr5 | 77.01602 | 77.06153 | 3.384552 | 1.0000000 |
| 71868 | ENSMUSG00000029248 | Thegl | theg spermatid protein like | intron_variant | 2 | chr5 | 77.01602 | 77.06153 | 3.384552 | 1.0000000 |
| 71868 | ENSMUSG00000029248 | Thegl | theg spermatid protein like | intron_variant | 4 | chr5 | 77.01602 | 77.06153 | 3.384552 | 1.0000000 |
| 71920 | ENSMUSG00000035020 | Epgn | epithelial mitogen | missense_variant | 2 | chr5 | 91.02746 | 91.03521 | 3.369517 | 1.0000000 |
| 71920 | ENSMUSG00000035020 | Epgn | epithelial mitogen | 3_prime_UTR_variant | 29 | chr5 | 91.02746 | 91.03521 | 3.369517 | 1.0000000 |
| 71920 | ENSMUSG00000035020 | Epgn | epithelial mitogen | intron_variant | 1 | chr5 | 91.02746 | 91.03521 | 3.369517 | 1.0000000 |
| 71920 | ENSMUSG00000035020 | Epgn | epithelial mitogen | synonymous_variant | 15 | chr5 | 91.02746 | 91.03521 | 3.369517 | 1.0000000 |
| 72094 | ENSMUSG00000035780 | Ugt2a3 | UDP glucuronosyltransferase 2 family, polypeptide A3 | missense_variant | 2 | chr5 | 87.32497 | 87.33719 | 2.416310 | 1.0000000 |
| 72094 | ENSMUSG00000035780 | Ugt2a3 | UDP glucuronosyltransferase 2 family, polypeptide A3 | synonymous_variant | 7 | chr5 | 87.32497 | 87.33719 | 2.416310 | 1.0000000 |
| 73246 | ENSMUSG00000029370 | Rassf6 | Ras association (RalGDS/AF-6) domain family member 6 | 3_prime_UTR_variant | 14 | chr5 | 90.60308 | 90.64066 | 3.249511 | 1.0000000 |
| 73246 | ENSMUSG00000029370 | Rassf6 | Ras association (RalGDS/AF-6) domain family member 6 | synonymous_variant | 2 | chr5 | 90.60308 | 90.64066 | 3.249511 | 1.0000000 |
| 73246 | ENSMUSG00000029370 | Rassf6 | Ras association (RalGDS/AF-6) domain family member 6 | missense_variant | 2 | chr5 | 90.60308 | 90.64066 | 3.249511 | 1.0000000 |
| 73246 | ENSMUSG00000029370 | Rassf6 | Ras association (RalGDS/AF-6) domain family member 6 | intron_variant | 5 | chr5 | 90.60308 | 90.64066 | 3.249511 | 1.0000000 |
| 73246 | ENSMUSG00000029370 | Rassf6 | Ras association (RalGDS/AF-6) domain family member 6 | 5_prime_UTR_variant | 6 | chr5 | 90.60308 | 90.64066 | 3.249511 | 1.0000000 |
| 73246 | ENSMUSG00000029370 | Rassf6 | Ras association (RalGDS/AF-6) domain family member 6 | upstream_gene_variant | 4 | chr5 | 90.60308 | 90.64066 | 3.249511 | 1.0000000 |
| 73471 | ENSMUSG00000099605 | 1700066N21Rik | RIKEN cDNA 1700066N21 gene | splice_region_variant | 1 | chr5 | 87.90858 | 87.97935 | 2.649730 | 1.0000000 |
| 73471 | ENSMUSG00000099605 | 1700066N21Rik | RIKEN cDNA 1700066N21 gene | non_coding_transcript_exon_variant | 4 | chr5 | 87.90858 | 87.97935 | 2.649730 | 1.0000000 |
| 73471 | ENSMUSG00000099605 | 1700066N21Rik | RIKEN cDNA 1700066N21 gene | intron_variant | 53 | chr5 | 87.90858 | 87.97935 | 2.649730 | 1.0000000 |
| 73471 | ENSMUSG00000099605 | 1700066N21Rik | RIKEN cDNA 1700066N21 gene | non_coding_transcript_variant | 3 | chr5 | 87.90858 | 87.97935 | 2.649730 | 1.0000000 |
| 73471 | ENSMUSG00000099605 | 1700066N21Rik | RIKEN cDNA 1700066N21 gene | non_coding_transcript_variant | 1 | chr5 | 87.90858 | 87.97935 | 2.649730 | 1.0000000 |
| 73471 | ENSMUSG00000099605 | 1700066N21Rik | RIKEN cDNA 1700066N21 gene | non_coding_transcript_variant | 4 | chr5 | 87.90858 | 87.97935 | 2.649730 | 1.0000000 |
| 73471 | ENSMUSG00000099605 | 1700066N21Rik | RIKEN cDNA 1700066N21 gene | intron_variant | 3 | chr5 | 87.90858 | 87.97935 | 2.649730 | 1.0000000 |
| 73471 | ENSMUSG00000099605 | 1700066N21Rik | RIKEN cDNA 1700066N21 gene | upstream_gene_variant | 9 | chr5 | 87.90858 | 87.97935 | 2.649730 | 1.0000000 |
| 73471 | ENSMUSG00000099605 | 1700066N21Rik | RIKEN cDNA 1700066N21 gene | non_coding_transcript_variant | 53 | chr5 | 87.90858 | 87.97935 | 2.649730 | 1.0000000 |
| 73471 | ENSMUSG00000099605 | 1700066N21Rik | RIKEN cDNA 1700066N21 gene | intron_variant | 1 | chr5 | 87.90858 | 87.97935 | 2.649730 | 1.0000000 |
| 73779 | ENSMUSG00000002240 | Prr27 | proline rich 27 | upstream_gene_variant | 14 | chr5 | 87.82569 | 87.84639 | 3.243173 | 0.2227974 |
| 73779 | ENSMUSG00000002240 | Prr27 | proline rich 27 | synonymous_variant | 4 | chr5 | 87.82569 | 87.84639 | 3.243173 | 0.2227974 |
| 73779 | ENSMUSG00000002240 | Prr27 | proline rich 27 | downstream_gene_variant | 26 | chr5 | 87.82569 | 87.84639 | 3.243173 | 0.2227974 |
| 73779 | ENSMUSG00000002240 | Prr27 | proline rich 27 | 5_prime_UTR_variant | 2 | chr5 | 87.82569 | 87.84639 | 3.243173 | 0.2227974 |
| 73779 | ENSMUSG00000002240 | Prr27 | proline rich 27 | missense_variant | 5 | chr5 | 87.82569 | 87.84639 | 3.243173 | 0.2227974 |
| 74318 | ENSMUSG00000059325 | Hopx | HOP homeobox | intron_variant | 5 | chr5 | 77.08699 | 77.11512 | 7.682828 | 1.0000000 |
| 74318 | ENSMUSG00000059325 | Hopx | HOP homeobox | 3_prime_UTR_variant | 16 | chr5 | 77.08699 | 77.11512 | 7.682828 | 1.0000000 |
| 74318 | ENSMUSG00000059325 | Hopx | HOP homeobox | missense_variant | 2 | chr5 | 77.08699 | 77.11512 | 7.682828 | 1.0000000 |
| 74318 | ENSMUSG00000059325 | Hopx | HOP homeobox | synonymous_variant | 4 | chr5 | 77.08699 | 77.11512 | 7.682828 | 1.0000000 |
| 74318 | ENSMUSG00000059325 | Hopx | HOP homeobox | splice_region_variant | 1 | chr5 | 77.08699 | 77.11512 | 7.682828 | 1.0000000 |
| 74318 | ENSMUSG00000059325 | Hopx | HOP homeobox | 5_prime_UTR_variant | 11 | chr5 | 77.08699 | 77.11512 | 7.682828 | 1.0000000 |
| 74621 | ENSMUSG00000087037 | 4930432L08Rik | RIKEN cDNA 4930432L08 gene | non_coding_transcript_variant | 3 | chr5 | 76.33124 | 76.34189 | 3.025635 | 1.0000000 |
| 74621 | ENSMUSG00000087037 | 4930432L08Rik | RIKEN cDNA 4930432L08 gene | upstream_gene_variant | 4 | chr5 | 76.33124 | 76.34189 | 3.025635 | 1.0000000 |
| 74621 | ENSMUSG00000087037 | 4930432L08Rik | RIKEN cDNA 4930432L08 gene | non_coding_transcript_exon_variant | 3 | chr5 | 76.33124 | 76.34189 | 3.025635 | 1.0000000 |
| 74621 | ENSMUSG00000087037 | 4930432L08Rik | RIKEN cDNA 4930432L08 gene | non_coding_transcript_variant | 3 | chr5 | 76.33124 | 76.34189 | 3.025635 | 1.0000000 |
| 74621 | ENSMUSG00000087037 | 4930432L08Rik | RIKEN cDNA 4930432L08 gene | splice_region_variant | 1 | chr5 | 76.33124 | 76.34189 | 3.025635 | 1.0000000 |
| 74621 | ENSMUSG00000087037 | 4930432L08Rik | RIKEN cDNA 4930432L08 gene | intron_variant | 3 | chr5 | 76.33124 | 76.34189 | 3.025635 | 1.0000000 |
| 791294 | ENSMUSG00000054945 | Gm9958 | predicted gene 9958 | upstream_gene_variant | 2 | chr5 | 90.36662 | 90.36849 | 3.513235 | 1.0000000 |
| 791294 | ENSMUSG00000054945 | Gm9958 | predicted gene 9958 | 3_prime_UTR_variant | 2 | chr5 | 90.36662 | 90.36849 | 3.513235 | 1.0000000 |
| 791294 | ENSMUSG00000054945 | Gm9958 | predicted gene 9958 | missense_variant | 2 | chr5 | 90.36662 | 90.36849 | 3.513235 | 1.0000000 |
| 791294 | ENSMUSG00000054945 | Gm9958 | predicted gene 9958 | 5_prime_UTR_variant | 8 | chr5 | 90.36662 | 90.36849 | 3.513235 | 1.0000000 |
| 791294 | ENSMUSG00000054945 | Gm9958 | predicted gene 9958 | upstream_gene_variant | 20 | chr5 | 90.36662 | 90.36849 | 3.513235 | 1.0000000 |
| 79455 | ENSMUSG00000029235 | Pdcl2 | phosducin-like 2 | 3_prime_UTR_variant | 5 | chr5 | 76.31212 | 76.33116 | 2.678439 | 1.0000000 |
| 79455 | ENSMUSG00000029235 | Pdcl2 | phosducin-like 2 | upstream_gene_variant | 2 | chr5 | 76.31212 | 76.33116 | 2.678439 | 1.0000000 |
| 79455 | ENSMUSG00000029235 | Pdcl2 | phosducin-like 2 | 5_prime_UTR_variant | 4 | chr5 | 76.31212 | 76.33116 | 2.678439 | 1.0000000 |
| 79455 | ENSMUSG00000029235 | Pdcl2 | phosducin-like 2 | missense_variant | 2 | chr5 | 76.31212 | 76.33116 | 2.678439 | 1.0000000 |
| 79455 | ENSMUSG00000029235 | Pdcl2 | phosducin-like 2 | downstream_gene_variant | 1 | chr5 | 76.31212 | 76.33116 | 2.678439 | 1.0000000 |
| 79455 | ENSMUSG00000029235 | Pdcl2 | phosducin-like 2 | synonymous_variant | 5 | chr5 | 76.31212 | 76.33116 | 2.678439 | 1.0000000 |
| 81702 | ENSMUSG00000055204 | Ankrd17 | ankyrin repeat domain 17 | downstream_gene_variant | 1 | chr5 | 90.22717 | 90.36658 | 6.313568 | 1.0000000 |
| 81702 | ENSMUSG00000055204 | Ankrd17 | ankyrin repeat domain 17 | upstream_gene_variant | 14 | chr5 | 90.22717 | 90.36658 | 6.313568 | 1.0000000 |
| 81702 | ENSMUSG00000055204 | Ankrd17 | ankyrin repeat domain 17 | missense_variant | 2 | chr5 | 90.22717 | 90.36658 | 6.313568 | 1.0000000 |
| 81702 | ENSMUSG00000055204 | Ankrd17 | ankyrin repeat domain 17 | intron_variant | 14 | chr5 | 90.22717 | 90.36658 | 6.313568 | 1.0000000 |
| 81702 | ENSMUSG00000055204 | Ankrd17 | ankyrin repeat domain 17 | synonymous_variant | 16 | chr5 | 90.22717 | 90.36658 | 6.313568 | 1.0000000 |
| 81702 | ENSMUSG00000055204 | Ankrd17 | ankyrin repeat domain 17 | downstream_gene_variant | 26 | chr5 | 90.22717 | 90.36658 | 6.313568 | 1.0000000 |
| 81702 | ENSMUSG00000055204 | Ankrd17 | ankyrin repeat domain 17 | 3_prime_UTR_variant | 24 | chr5 | 90.22717 | 90.36658 | 6.313568 | 1.0000000 |
| 81702 | ENSMUSG00000055204 | Ankrd17 | ankyrin repeat domain 17 | upstream_gene_variant | 8 | chr5 | 90.22717 | 90.36658 | 6.313568 | 1.0000000 |
| 81702 | ENSMUSG00000055204 | Ankrd17 | ankyrin repeat domain 17 | 5_prime_UTR_variant | 4 | chr5 | 90.22717 | 90.36658 | 6.313568 | 1.0000000 |
| NA | NA | NA | NA | NA | NA | NA | NA | NA | 1.785811 | 0.4067408 |
For each QTL peak with a LOD > 7.7, we searched for colocated QTL for other phenotypes with LOD >= 6.0.
| Phenotype | Chr | Pos | LOD | CI low | CI high |
|---|---|---|---|---|---|
| lung_cxcl5 | 15 | 25.75102 | 6.743733 | 20.75102 | 30.75102 |
| lung_cxcl2 | 15 | 25.75102 | 6.607928 | 20.75102 | 30.75102 |
| lung_cxcl1 | 15 | 25.75102 | 7.907527 | 19.16443 | 25.83097 |
| lung_mmp8 | 15 | 25.75102 | 6.391997 | 20.75102 | 30.75102 |
The lung Cxcl1 QTL on Chr 15 is colocated with three other QTL for lung: lung Cxcl2, Cxcl5 & Mmp8.
These peaks have similar allele effects patterns and may be driven by the same genes.
Below is the association mapping plot for lung Cxcl1.
There are 8 unique genes in the QTL interval. We measured expression for 7 of these genes.
Plot a histogram of the correlations.
The correlations are distributed as expected. Plot the gene with the highest correlation vs. the phenotype, colored by DO generation.
Produce a list of genes with mean expression and correlation p-values.
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
| entrez | ensembl | symbol | genename | consequence | num_snps | chr | start | end | mean_expr | bonf.p.value |
|---|---|---|---|---|---|---|---|---|---|---|
| 17909 | ENSMUSG00000022272 | Myo10 | myosin X | 5_prime_UTR_variant | 44 | chr15 | 25.62252 | 25.81367 | 8.101273 | 0.0000000 |
| 17909 | ENSMUSG00000022272 | Myo10 | myosin X | non_coding_transcript_exon_variant | 39 | chr15 | 25.62252 | 25.81367 | 8.101273 | 0.0000000 |
| 17909 | ENSMUSG00000022272 | Myo10 | myosin X | non_coding_transcript_variant | 39 | chr15 | 25.62252 | 25.81367 | 8.101273 | 0.0000000 |
| 17909 | ENSMUSG00000022272 | Myo10 | myosin X | upstream_gene_variant | 3 | chr15 | 25.62252 | 25.81367 | 8.101273 | 0.0000000 |
| 17909 | ENSMUSG00000022272 | Myo10 | myosin X | 3_prime_UTR_variant | 42 | chr15 | 25.62252 | 25.81367 | 8.101273 | 0.0000000 |
| 17909 | ENSMUSG00000022272 | Myo10 | myosin X | downstream_gene_variant | 32 | chr15 | 25.62252 | 25.81367 | 8.101273 | 0.0000000 |
| 17909 | ENSMUSG00000022272 | Myo10 | myosin X | splice_region_variant | 3 | chr15 | 25.62252 | 25.81367 | 8.101273 | 0.0000000 |
| 17909 | ENSMUSG00000022272 | Myo10 | myosin X | intron_variant | 54 | chr15 | 25.62252 | 25.81367 | 8.101273 | 0.0000000 |
| 17909 | ENSMUSG00000022272 | Myo10 | myosin X | synonymous_variant | 44 | chr15 | 25.62252 | 25.81367 | 8.101273 | 0.0000000 |
| 17909 | ENSMUSG00000022272 | Myo10 | myosin X | missense_variant | 6 | chr15 | 25.62252 | 25.81367 | 8.101273 | 0.0000000 |
| 215654 | ENSMUSG00000040452 | Cdh12 | cadherin 12 | upstream_gene_variant | 1 | chr15 | 21.11013 | 21.58953 | 2.387870 | 0.0007485 |
| 215654 | ENSMUSG00000040452 | Cdh12 | cadherin 12 | 5_prime_UTR_variant | 1 | chr15 | 21.11013 | 21.58953 | 2.387870 | 0.0007485 |
| 215654 | ENSMUSG00000040452 | Cdh12 | cadherin 12 | synonymous_variant | 6 | chr15 | 21.11013 | 21.58953 | 2.387870 | 0.0007485 |
| 215654 | ENSMUSG00000040452 | Cdh12 | cadherin 12 | stop_gained | 1 | chr15 | 21.11013 | 21.58953 | 2.387870 | 0.0007485 |
| 215654 | ENSMUSG00000040452 | Cdh12 | cadherin 12 | 3_prime_UTR_variant | 32 | chr15 | 21.11013 | 21.58953 | 2.387870 | 0.0007485 |
| 215654 | ENSMUSG00000040452 | Cdh12 | cadherin 12 | missense_variant | 1 | chr15 | 21.11013 | 21.58953 | 2.387870 | 0.0007485 |
| 320865 | ENSMUSG00000040420 | Cdh18 | cadherin 18 | 5_prime_UTR_variant | 7 | chr15 | 22.54902 | 23.47442 | 3.265981 | 0.0000280 |
| 320865 | ENSMUSG00000040420 | Cdh18 | cadherin 18 | non_coding_transcript_exon_variant | 28 | chr15 | 22.54902 | 23.47442 | 3.265981 | 0.0000280 |
| 320865 | ENSMUSG00000040420 | Cdh18 | cadherin 18 | non_coding_transcript_variant | 28 | chr15 | 22.54902 | 23.47442 | 3.265981 | 0.0000280 |
| 320865 | ENSMUSG00000040420 | Cdh18 | cadherin 18 | upstream_gene_variant | 6 | chr15 | 22.54902 | 23.47442 | 3.265981 | 0.0000280 |
| 320865 | ENSMUSG00000040420 | Cdh18 | cadherin 18 | intron_variant | 14 | chr15 | 22.54902 | 23.47442 | 3.265981 | 0.0000280 |
| 320865 | ENSMUSG00000040420 | Cdh18 | cadherin 18 | missense_variant | 1 | chr15 | 22.54902 | 23.47442 | 3.265981 | 0.0000280 |
| 320865 | ENSMUSG00000040420 | Cdh18 | cadherin 18 | splice_region_variant | 1 | chr15 | 22.54902 | 23.47442 | 3.265981 | 0.0000280 |
| 320865 | ENSMUSG00000040420 | Cdh18 | cadherin 18 | synonymous_variant | 15 | chr15 | 22.54902 | 23.47442 | 3.265981 | 0.0000280 |
| 320865 | ENSMUSG00000040420 | Cdh18 | cadherin 18 | downstream_gene_variant | 8 | chr15 | 22.54902 | 23.47442 | 3.265981 | 0.0000280 |
| 320865 | ENSMUSG00000040420 | Cdh18 | cadherin 18 | 3_prime_UTR_variant | 5 | chr15 | 22.54902 | 23.47442 | 3.265981 | 0.0000280 |
| 320865 | ENSMUSG00000040420 | Cdh18 | cadherin 18 | intron_variant | 12 | chr15 | 22.54902 | 23.47442 | 3.265981 | 0.0000280 |
| 545091 | ENSMUSG00000021927 | Hnrnpa1l2-ps2 | heterogeneous nuclear ribonucleoprotein A1-like 2, pseudogene 2 | non_coding_transcript_exon_variant | 12 | chr15 | 22.71387 | 22.71483 | 4.720948 | 0.0255356 |
| 545091 | ENSMUSG00000021927 | Hnrnpa1l2-ps2 | heterogeneous nuclear ribonucleoprotein A1-like 2, pseudogene 2 | non_coding_transcript_variant | 12 | chr15 | 22.71387 | 22.71483 | 4.720948 | 0.0255356 |
| 64833 | ENSMUSG00000047565 | Acot10 | acyl-CoA thioesterase 10 | 3_prime_UTR_variant | 1 | chr15 | 20.66521 | 20.66675 | 2.245246 | 1.0000000 |
| 64833 | ENSMUSG00000047565 | Acot10 | acyl-CoA thioesterase 10 | 5_prime_UTR_variant | 1 | chr15 | 20.66521 | 20.66675 | 2.245246 | 1.0000000 |
| 64833 | ENSMUSG00000047565 | Acot10 | acyl-CoA thioesterase 10 | synonymous_variant | 1 | chr15 | 20.66521 | 20.66675 | 2.245246 | 1.0000000 |
| 64833 | ENSMUSG00000047565 | Acot10 | acyl-CoA thioesterase 10 | missense_variant | 4 | chr15 | 20.66521 | 20.66675 | 2.245246 | 1.0000000 |
| 70350 | ENSMUSG00000045763 | Basp1 | brain abundant, membrane attached signal protein 1 | 3_prime_UTR_variant | 7 | chr15 | 25.36328 | 25.41376 | 6.813955 | 0.0000000 |
| 70350 | ENSMUSG00000045763 | Basp1 | brain abundant, membrane attached signal protein 1 | missense_variant | 4 | chr15 | 25.36328 | 25.41376 | 6.813955 | 0.0000000 |
| 70350 | ENSMUSG00000045763 | Basp1 | brain abundant, membrane attached signal protein 1 | synonymous_variant | 6 | chr15 | 25.36328 | 25.41376 | 6.813955 | 0.0000000 |
| 70350 | ENSMUSG00000045763 | Basp1 | brain abundant, membrane attached signal protein 1 | upstream_gene_variant | 4 | chr15 | 25.36328 | 25.41376 | 6.813955 | 0.0000000 |
| 70350 | ENSMUSG00000045763 | Basp1 | brain abundant, membrane attached signal protein 1 | 5_prime_UTR_variant | 3 | chr15 | 25.36328 | 25.41376 | 6.813955 | 0.0000000 |
For each QTL peak with a LOD > 7.7, we searched for colocated QTL for other phenotypes with LOD >= 6.0.
| Phenotype | Chr | Pos | LOD | CI low | CI high |
|---|---|---|---|---|---|
| pct_wt_loss | 17 | 34.24046 | 6.161746 | 29.24046 | 39.24046 |
| lung_cxcl2 | 17 | 35.32792 | 7.008385 | 32.89530 | 41.96493 |
| lung_cxcl1 | 17 | 35.32792 | 6.860699 | 33.60628 | 41.99147 |
| necr_ratio | 17 | 37.22030 | 7.921965 | 35.19377 | 41.96493 |
The lung necrosis ratio QTL on Chr 17 is colocated with three other QTL for lung: lung Cxcl1, Cxcl2, & % weight loss.
These peaks have similar allele effects patterns and may be driven by the same genes.
Below is the association mapping plot for lung necrosis ratio.
There are 166 unique genes in the QTL interval. We measured expression for 138 of these genes.
Plot a histogram of the correlations.
The correlations are oddly distributed. Plot the gene with the highest correlation vs. the phenotype, colored by DO generation.
Produce a list of genes with mean expression and correlation p-values.
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:many mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:many mapping between keys and columns
## 'select()' returned 1:many mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:many mapping between keys and columns
## 'select()' returned 1:many mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:many mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
## 'select()' returned 1:1 mapping between keys and columns
| entrez | ensembl | symbol | genename | consequence | num_snps | chr | start | end | mean_expr | bonf.p.value |
|---|---|---|---|---|---|---|---|---|---|---|
| 100043300 | ENSMUSG00000096345 | Esp16 | exocrine gland secreted peptide 16 | 3_prime_UTR_variant | 2 | chr17 | 39.53614 | 39.54085 | 1.652522 | 1.0000000 |
| 100124459 | ENSMUSG00000077931 | Mir877 | microRNA 877 | upstream_gene_variant | 6 | chr17 | 35.96073 | 35.96081 | 2.683884 | 1.0000000 |
| 100124459 | ENSMUSG00000077931 | Mir877 | microRNA 877 | non_coding_transcript_variant | 1 | chr17 | 35.96073 | 35.96081 | 2.683884 | 1.0000000 |
| 100124459 | ENSMUSG00000077931 | Mir877 | microRNA 877 | non_coding_transcript_exon_variant | 1 | chr17 | 35.96073 | 35.96081 | 2.683884 | 1.0000000 |
| 100124459 | ENSMUSG00000077931 | Mir877 | microRNA 877 | downstream_gene_variant | 10 | chr17 | 35.96073 | 35.96081 | 2.683884 | 1.0000000 |
| 100126765 | ENSMUSG00000092322 | Esp36 | exocrine gland secreted peptide 36 | 3_prime_UTR_variant | 1 | chr17 | 38.41647 | 38.42018 | 2.426381 | 0.0091707 |
| 100126766 | ENSMUSG00000093957 | Esp3 | exocrine gland secreted peptide 3 | 3_prime_UTR_variant | 1 | chr17 | 40.63208 | 40.63706 | 1.806255 | 0.6377882 |
| 100126774 | ENSMUSG00000094024 | Esp18 | exocrine gland secreted peptide 18 | 3_prime_UTR_variant | 5 | chr17 | 39.40636 | 39.41099 | 3.641385 | 0.0004448 |
| 100126777 | ENSMUSG00000095540 | Esp4 | exocrine gland secreted peptide 4 | missense_variant | 1 | chr17 | 40.59859 | 40.60262 | 2.230970 | 0.0262394 |
| 100126778 | ENSMUSG00000090747 | Esp8 | exocrine gland secreted peptide 8 | missense_variant | 3 | chr17 | 40.52002 | 40.53042 | 2.367291 | 0.0250639 |
| 100126778 | ENSMUSG00000090747 | Esp8 | exocrine gland secreted peptide 8 | 5_prime_UTR_variant | 1 | chr17 | 40.52002 | 40.53042 | 2.367291 | 0.0250639 |
| 100126779 | ENSMUSG00000096697 | Esp23 | exocrine gland secreted peptide 23 | 5_prime_UTR_variant | 3 | chr17 | 39.07369 | 39.07704 | 3.502295 | 0.0216147 |
| 100316810 | ENSMUSG00000084751 | Mir1894 | microRNA 1894 | upstream_gene_variant | 6 | chr17 | 35.91789 | 35.91797 | NA | NA |
| 100316810 | ENSMUSG00000084751 | Mir1894 | microRNA 1894 | upstream_gene_variant | 2 | chr17 | 35.91789 | 35.91797 | NA | NA |
| 100529082 | ENSMUSG00000079492 | Gm11127 | predicted gene 11127 | missense_variant | 7 | chr17 | 36.05582 | 36.05837 | 6.945261 | 1.0000000 |
| 100529082 | ENSMUSG00000079492 | Gm11127 | predicted gene 11127 | synonymous_variant | 1 | chr17 | 36.05582 | 36.05837 | 6.945261 | 1.0000000 |
| 100529082 | ENSMUSG00000079492 | Gm11127 | predicted gene 11127 | missense_variant | 6 | chr17 | 36.05582 | 36.05837 | 6.945261 | 1.0000000 |
| 100529082 | ENSMUSG00000079492 | Gm11127 | predicted gene 11127 | synonymous_variant | 2 | chr17 | 36.05582 | 36.05837 | 6.945261 | 1.0000000 |
| 102465588 | ENSMUSG00000098291 | Mir6973a | microRNA 6973a | downstream_gene_variant | 11 | chr17 | 35.19497 | 35.19505 | NA | NA |
| 102465588 | ENSMUSG00000098291 | Mir6973a | microRNA 6973a | non_coding_transcript_exon_variant | 1 | chr17 | 35.19497 | 35.19505 | NA | NA |
| 102465588 | ENSMUSG00000098291 | Mir6973a | microRNA 6973a | non_coding_transcript_variant | 1 | chr17 | 35.19497 | 35.19505 | NA | NA |
| 102465588 | ENSMUSG00000098291 | Mir6973a | microRNA 6973a | downstream_gene_variant | 38 | chr17 | 35.19497 | 35.19505 | NA | NA |
| 102465588 | ENSMUSG00000098291 | Mir6973a | microRNA 6973a | upstream_gene_variant | 2 | chr17 | 35.19497 | 35.19505 | NA | NA |
| 102465589 | ENSMUSG00000098499 | Mir6975 | microRNA 6975 | mature_miRNA_variant | 1 | chr17 | 35.24408 | 35.24413 | NA | NA |
| 102465589 | ENSMUSG00000098499 | Mir6975 | microRNA 6975 | non_coding_transcript_exon_variant | 2 | chr17 | 35.24408 | 35.24413 | NA | NA |
| 102465589 | ENSMUSG00000098499 | Mir6975 | microRNA 6975 | non_coding_transcript_variant | 2 | chr17 | 35.24408 | 35.24413 | NA | NA |
| 102465589 | ENSMUSG00000098499 | Mir6975 | microRNA 6975 | upstream_gene_variant | 14 | chr17 | 35.24408 | 35.24413 | NA | NA |
| 102465886 | ENSMUSG00000098269 | Mir8094 | microRNA 8094 | downstream_gene_variant | 6 | chr17 | 35.25129 | 35.25140 | NA | NA |
| 102465886 | ENSMUSG00000098269 | Mir8094 | microRNA 8094 | upstream_gene_variant | 2 | chr17 | 35.25129 | 35.25140 | NA | NA |
| 102466990 | ENSMUSG00000099006 | Mir6974 | microRNA 6974 | upstream_gene_variant | 1 | chr17 | 35.20448 | 35.20456 | NA | NA |
| 102466990 | ENSMUSG00000099006 | Mir6974 | microRNA 6974 | downstream_gene_variant | 24 | chr17 | 35.20448 | 35.20456 | NA | NA |
| 102466990 | ENSMUSG00000099006 | Mir6974 | microRNA 6974 | downstream_gene_variant | 3 | chr17 | 35.20448 | 35.20456 | NA | NA |
| 102577428 | ENSMUSG00000090897 | Gm44501 | predicted readthrough transcript, 44501 | missense_variant | 2 | chr17 | 40.56151 | 40.57955 | 1.801908 | 1.0000000 |
| 102577428 | ENSMUSG00000090897 | Gm44501 | predicted readthrough transcript, 44501 | intron_variant | 2 | chr17 | 40.56151 | 40.57955 | 1.801908 | 1.0000000 |
| 102577428 | ENSMUSG00000090897 | Gm44501 | predicted readthrough transcript, 44501 | missense_variant | 2 | chr17 | 40.56151 | 40.57955 | 1.801908 | 1.0000000 |
| 106582 | ENSMUSG00000059791 | Nrm | nurim (nuclear envelope membrane protein) | synonymous_variant | 3 | chr17 | 35.86132 | 35.86540 | 5.453577 | 1.0000000 |
| 106582 | ENSMUSG00000059791 | Nrm | nurim (nuclear envelope membrane protein) | downstream_gene_variant | 4 | chr17 | 35.86132 | 35.86540 | 5.453577 | 1.0000000 |
| 106582 | ENSMUSG00000059791 | Nrm | nurim (nuclear envelope membrane protein) | splice_region_variant | 3 | chr17 | 35.86132 | 35.86540 | 5.453577 | 1.0000000 |
| 106582 | ENSMUSG00000059791 | Nrm | nurim (nuclear envelope membrane protein) | upstream_gene_variant | 21 | chr17 | 35.86132 | 35.86540 | 5.453577 | 1.0000000 |
| 106582 | ENSMUSG00000059791 | Nrm | nurim (nuclear envelope membrane protein) | 5_prime_UTR_variant | 2 | chr17 | 35.86132 | 35.86540 | 5.453577 | 1.0000000 |
| 106582 | ENSMUSG00000059791 | Nrm | nurim (nuclear envelope membrane protein) | 3_prime_UTR_variant | 3 | chr17 | 35.86132 | 35.86540 | 5.453577 | 1.0000000 |
| 106582 | ENSMUSG00000059791 | Nrm | nurim (nuclear envelope membrane protein) | downstream_gene_variant | 22 | chr17 | 35.86132 | 35.86540 | 5.453577 | 1.0000000 |
| 106582 | ENSMUSG00000059791 | Nrm | nurim (nuclear envelope membrane protein) | upstream_gene_variant | 2 | chr17 | 35.86132 | 35.86540 | 5.453577 | 1.0000000 |
| 106582 | ENSMUSG00000059791 | Nrm | nurim (nuclear envelope membrane protein) | missense_variant | 4 | chr17 | 35.86132 | 35.86540 | 5.453577 | 1.0000000 |
| 106795 | ENSMUSG00000050410 | Tcf19 | transcription factor 19 | downstream_gene_variant | 12 | chr17 | 35.51273 | 35.51682 | 5.782700 | 1.0000000 |
| 106795 | ENSMUSG00000050410 | Tcf19 | transcription factor 19 | downstream_gene_variant | 6 | chr17 | 35.51273 | 35.51682 | 5.782700 | 1.0000000 |
| 106795 | ENSMUSG00000050410 | Tcf19 | transcription factor 19 | splice_region_variant | 2 | chr17 | 35.51273 | 35.51682 | 5.782700 | 1.0000000 |
| 106795 | ENSMUSG00000050410 | Tcf19 | transcription factor 19 | missense_variant | 3 | chr17 | 35.51273 | 35.51682 | 5.782700 | 1.0000000 |
| 106795 | ENSMUSG00000050410 | Tcf19 | transcription factor 19 | intron_variant | 4 | chr17 | 35.51273 | 35.51682 | 5.782700 | 1.0000000 |
| 106795 | ENSMUSG00000050410 | Tcf19 | transcription factor 19 | upstream_gene_variant | 4 | chr17 | 35.51273 | 35.51682 | 5.782700 | 1.0000000 |
| 106795 | ENSMUSG00000050410 | Tcf19 | transcription factor 19 | 3_prime_UTR_variant | 9 | chr17 | 35.51273 | 35.51682 | 5.782700 | 1.0000000 |
| 106795 | ENSMUSG00000050410 | Tcf19 | transcription factor 19 | upstream_gene_variant | 44 | chr17 | 35.51273 | 35.51682 | 5.782700 | 1.0000000 |
| 106795 | ENSMUSG00000050410 | Tcf19 | transcription factor 19 | 5_prime_UTR_variant | 10 | chr17 | 35.51273 | 35.51682 | 5.782700 | 1.0000000 |
| 106795 | ENSMUSG00000050410 | Tcf19 | transcription factor 19 | synonymous_variant | 12 | chr17 | 35.51273 | 35.51682 | 5.782700 | 1.0000000 |
| 110557 | ENSMUSG00000073409 | H2-Q6 | histocompatibility 2, Q region locus 6 | missense_variant | 2 | chr17 | 35.42485 | 35.43006 | 7.954555 | 1.0000000 |
| 110557 | ENSMUSG00000073409 | H2-Q6 | histocompatibility 2, Q region locus 6 | upstream_gene_variant | 1 | chr17 | 35.42485 | 35.43006 | 7.954555 | 1.0000000 |
| 110557 | ENSMUSG00000073409 | H2-Q6 | histocompatibility 2, Q region locus 6 | 5_prime_UTR_variant | 1 | chr17 | 35.42485 | 35.43006 | 7.954555 | 1.0000000 |
| 110557 | ENSMUSG00000073409 | H2-Q6 | histocompatibility 2, Q region locus 6 | downstream_gene_variant | 1 | chr17 | 35.42485 | 35.43006 | 7.954555 | 1.0000000 |
| 110557 | ENSMUSG00000073409 | H2-Q6 | histocompatibility 2, Q region locus 6 | 3_prime_UTR_variant | 1 | chr17 | 35.42485 | 35.43006 | 7.954555 | 1.0000000 |
| 110558 | ENSMUSG00000060550 | H2-Q9 | histocompatibility 2, Q region locus 9 | upstream_gene_variant | 1 | chr17 | 35.43921 | 35.44377 | NA | NA |
| 110558 | ENSMUSG00000060550 | H2-Q9 | histocompatibility 2, Q region locus 9 | non_coding_transcript_exon_variant | 1 | chr17 | 35.43921 | 35.44377 | NA | NA |
| 110558 | ENSMUSG00000060550 | H2-Q9 | histocompatibility 2, Q region locus 9 | non_coding_transcript_variant | 1 | chr17 | 35.43921 | 35.44377 | NA | NA |
| 110558 | ENSMUSG00000060550 | H2-Q9 | histocompatibility 2, Q region locus 9 | intron_variant | 1 | chr17 | 35.43921 | 35.44377 | NA | NA |
| 110696 | ENSMUSG00000058124 | H2-M10.3 | histocompatibility 2, M region locus 10.3 | missense_variant | 4 | chr17 | 36.36500 | 36.36842 | 3.453284 | 0.1594535 |
| 110696 | ENSMUSG00000058124 | H2-M10.3 | histocompatibility 2, M region locus 10.3 | synonymous_variant | 6 | chr17 | 36.36500 | 36.36842 | 3.453284 | 0.1594535 |
| 110696 | ENSMUSG00000058124 | H2-M10.3 | histocompatibility 2, M region locus 10.3 | 3_prime_UTR_variant | 6 | chr17 | 36.36500 | 36.36842 | 3.453284 | 0.1594535 |
| 11571 | ENSMUSG00000025431 | Crisp1 | cysteine-rich secretory protein 1 | synonymous_variant | 1 | chr17 | 40.29376 | 40.31921 | 2.782617 | 1.0000000 |
| 12305 | ENSMUSG00000003534 | Ddr1 | discoidin domain receptor family, member 1 | 3_prime_UTR_variant | 29 | chr17 | 35.68157 | 35.70462 | 5.569803 | 0.0030921 |
| 12305 | ENSMUSG00000003534 | Ddr1 | discoidin domain receptor family, member 1 | intron_variant | 7 | chr17 | 35.68157 | 35.70462 | 5.569803 | 0.0030921 |
| 12305 | ENSMUSG00000003534 | Ddr1 | discoidin domain receptor family, member 1 | upstream_gene_variant | 5 | chr17 | 35.68157 | 35.70462 | 5.569803 | 0.0030921 |
| 12305 | ENSMUSG00000003534 | Ddr1 | discoidin domain receptor family, member 1 | missense_variant | 8 | chr17 | 35.68157 | 35.70462 | 5.569803 | 0.0030921 |
| 12305 | ENSMUSG00000003534 | Ddr1 | discoidin domain receptor family, member 1 | downstream_gene_variant | 41 | chr17 | 35.68157 | 35.70462 | 5.569803 | 0.0030921 |
| 12305 | ENSMUSG00000003534 | Ddr1 | discoidin domain receptor family, member 1 | NMD_transcript_variant | 32 | chr17 | 35.68157 | 35.70462 | 5.569803 | 0.0030921 |
| 12305 | ENSMUSG00000003534 | Ddr1 | discoidin domain receptor family, member 1 | 5_prime_UTR_variant | 8 | chr17 | 35.68157 | 35.70462 | 5.569803 | 0.0030921 |
| 12305 | ENSMUSG00000003534 | Ddr1 | discoidin domain receptor family, member 1 | splice_region_variant | 1 | chr17 | 35.68157 | 35.70462 | 5.569803 | 0.0030921 |
| 12305 | ENSMUSG00000003534 | Ddr1 | discoidin domain receptor family, member 1 | synonymous_variant | 30 | chr17 | 35.68157 | 35.70462 | 5.569803 | 0.0030921 |
| 14251 | ENSMUSG00000059714 | Flot1 | flotillin 1 | non_coding_transcript_exon_variant | 23 | chr17 | 35.82323 | 35.83279 | 6.933524 | 0.0065458 |
| 14251 | ENSMUSG00000059714 | Flot1 | flotillin 1 | upstream_gene_variant | 7 | chr17 | 35.82323 | 35.83279 | 6.933524 | 0.0065458 |
| 14251 | ENSMUSG00000059714 | Flot1 | flotillin 1 | upstream_gene_variant | 11 | chr17 | 35.82323 | 35.83279 | 6.933524 | 0.0065458 |
| 14251 | ENSMUSG00000059714 | Flot1 | flotillin 1 | 3_prime_UTR_variant | 3 | chr17 | 35.82323 | 35.83279 | 6.933524 | 0.0065458 |
| 14251 | ENSMUSG00000059714 | Flot1 | flotillin 1 | NMD_transcript_variant | 11 | chr17 | 35.82323 | 35.83279 | 6.933524 | 0.0065458 |
| 14251 | ENSMUSG00000059714 | Flot1 | flotillin 1 | downstream_gene_variant | 25 | chr17 | 35.82323 | 35.83279 | 6.933524 | 0.0065458 |
| 14251 | ENSMUSG00000059714 | Flot1 | flotillin 1 | splice_region_variant | 2 | chr17 | 35.82323 | 35.83279 | 6.933524 | 0.0065458 |
| 14251 | ENSMUSG00000059714 | Flot1 | flotillin 1 | intron_variant | 12 | chr17 | 35.82323 | 35.83279 | 6.933524 | 0.0065458 |
| 14251 | ENSMUSG00000059714 | Flot1 | flotillin 1 | non_coding_transcript_variant | 26 | chr17 | 35.82323 | 35.83279 | 6.933524 | 0.0065458 |
| 14251 | ENSMUSG00000059714 | Flot1 | flotillin 1 | synonymous_variant | 12 | chr17 | 35.82323 | 35.83279 | 6.933524 | 0.0065458 |
| 14251 | ENSMUSG00000059714 | Flot1 | flotillin 1 | downstream_gene_variant | 20 | chr17 | 35.82323 | 35.83279 | 6.933524 | 0.0065458 |
| 14251 | ENSMUSG00000059714 | Flot1 | flotillin 1 | 5_prime_UTR_variant | 8 | chr17 | 35.82323 | 35.83279 | 6.933524 | 0.0065458 |
| 14670 | ENSMUSG00000024429 | Gnl1 | guanine nucleotide binding protein-like 1 | 5_prime_UTR_variant | 4 | chr17 | 35.97985 | 35.98946 | 5.504536 | 1.0000000 |
| 14670 | ENSMUSG00000024429 | Gnl1 | guanine nucleotide binding protein-like 1 | downstream_gene_variant | 2 | chr17 | 35.97985 | 35.98946 | 5.504536 | 1.0000000 |
| 14670 | ENSMUSG00000024429 | Gnl1 | guanine nucleotide binding protein-like 1 | non_coding_transcript_variant | 2 | chr17 | 35.97985 | 35.98946 | 5.504536 | 1.0000000 |
| 14670 | ENSMUSG00000024429 | Gnl1 | guanine nucleotide binding protein-like 1 | 3_prime_UTR_variant | 11 | chr17 | 35.97985 | 35.98946 | 5.504536 | 1.0000000 |
| 14670 | ENSMUSG00000024429 | Gnl1 | guanine nucleotide binding protein-like 1 | synonymous_variant | 7 | chr17 | 35.97985 | 35.98946 | 5.504536 | 1.0000000 |
| 14670 | ENSMUSG00000024429 | Gnl1 | guanine nucleotide binding protein-like 1 | non_coding_transcript_exon_variant | 2 | chr17 | 35.97985 | 35.98946 | 5.504536 | 1.0000000 |
| 14670 | ENSMUSG00000024429 | Gnl1 | guanine nucleotide binding protein-like 1 | missense_variant | 1 | chr17 | 35.97985 | 35.98946 | 5.504536 | 1.0000000 |
| 14670 | ENSMUSG00000024429 | Gnl1 | guanine nucleotide binding protein-like 1 | upstream_gene_variant | 4 | chr17 | 35.97985 | 35.98946 | 5.504536 | 1.0000000 |
| 14670 | ENSMUSG00000024429 | Gnl1 | guanine nucleotide binding protein-like 1 | upstream_gene_variant | 29 | chr17 | 35.97985 | 35.98946 | 5.504536 | 1.0000000 |
| 14670 | ENSMUSG00000024429 | Gnl1 | guanine nucleotide binding protein-like 1 | 5_prime_UTR_variant | 4 | chr17 | 35.97985 | 35.98946 | 5.504536 | 1.0000000 |
| 14885 | ENSMUSG00000001524 | Gtf2h4 | general transcription factor II H, polypeptide 4 | downstream_gene_variant | 33 | chr17 | 35.66773 | 35.67374 | 4.509064 | 1.0000000 |
| 14885 | ENSMUSG00000001524 | Gtf2h4 | general transcription factor II H, polypeptide 4 | missense_variant | 4 | chr17 | 35.66773 | 35.67374 | 4.509064 | 1.0000000 |
| 14885 | ENSMUSG00000001524 | Gtf2h4 | general transcription factor II H, polypeptide 4 | 5_prime_UTR_variant | 8 | chr17 | 35.66773 | 35.67374 | 4.509064 | 1.0000000 |
| 14885 | ENSMUSG00000001524 | Gtf2h4 | general transcription factor II H, polypeptide 4 | downstream_gene_variant | 34 | chr17 | 35.66773 | 35.67374 | 4.509064 | 1.0000000 |
| 14885 | ENSMUSG00000001524 | Gtf2h4 | general transcription factor II H, polypeptide 4 | non_coding_transcript_exon_variant | 46 | chr17 | 35.66773 | 35.67374 | 4.509064 | 1.0000000 |
| 14885 | ENSMUSG00000001524 | Gtf2h4 | general transcription factor II H, polypeptide 4 | NMD_transcript_variant | 48 | chr17 | 35.66773 | 35.67374 | 4.509064 | 1.0000000 |
| 14885 | ENSMUSG00000001524 | Gtf2h4 | general transcription factor II H, polypeptide 4 | synonymous_variant | 19 | chr17 | 35.66773 | 35.67374 | 4.509064 | 1.0000000 |
| 14885 | ENSMUSG00000001524 | Gtf2h4 | general transcription factor II H, polypeptide 4 | non_coding_transcript_variant | 47 | chr17 | 35.66773 | 35.67374 | 4.509064 | 1.0000000 |
| 14885 | ENSMUSG00000001524 | Gtf2h4 | general transcription factor II H, polypeptide 4 | upstream_gene_variant | 36 | chr17 | 35.66773 | 35.67374 | 4.509064 | 1.0000000 |
| 14885 | ENSMUSG00000001524 | Gtf2h4 | general transcription factor II H, polypeptide 4 | splice_region_variant | 1 | chr17 | 35.66773 | 35.67374 | 4.509064 | 1.0000000 |
| 14885 | ENSMUSG00000001524 | Gtf2h4 | general transcription factor II H, polypeptide 4 | 3_prime_UTR_variant | 13 | chr17 | 35.66773 | 35.67374 | 4.509064 | 1.0000000 |
| 14885 | ENSMUSG00000001524 | Gtf2h4 | general transcription factor II H, polypeptide 4 | intron_variant | 20 | chr17 | 35.66773 | 35.67374 | 4.509064 | 1.0000000 |
| 14963 | ENSMUSG00000073406 | H2-Bl | histocompatibility 2, blastocyst | upstream_gene_variant | 4 | chr17 | 36.08011 | 36.08422 | NA | NA |
| 14963 | ENSMUSG00000073406 | H2-Bl | histocompatibility 2, blastocyst | missense_variant | 4 | chr17 | 36.08011 | 36.08422 | NA | NA |
| 14963 | ENSMUSG00000073406 | H2-Bl | histocompatibility 2, blastocyst | intron_variant | 4 | chr17 | 36.08011 | 36.08422 | NA | NA |
| 14963 | ENSMUSG00000073406 | H2-Bl | histocompatibility 2, blastocyst | NMD_transcript_variant | 4 | chr17 | 36.08011 | 36.08422 | NA | NA |
| 14963 | ENSMUSG00000073406 | H2-Bl | histocompatibility 2, blastocyst | 3_prime_UTR_variant | 4 | chr17 | 36.08011 | 36.08422 | NA | NA |
| 14964 | ENSMUSG00000073411 | H2-D1 | histocompatibility 2, D region locus 1 | non_coding_transcript_variant | 1 | chr17 | 35.26273 | 35.26750 | NA | NA |
| 14964 | ENSMUSG00000073411 | H2-D1 | histocompatibility 2, D region locus 1 | missense_variant | 1 | chr17 | 35.26273 | 35.26750 | NA | NA |
| 14964 | ENSMUSG00000073411 | H2-D1 | histocompatibility 2, D region locus 1 | non_coding_transcript_variant | 1 | chr17 | 35.26273 | 35.26750 | NA | NA |
| 14964 | ENSMUSG00000073411 | H2-D1 | histocompatibility 2, D region locus 1 | non_coding_transcript_exon_variant | 1 | chr17 | 35.26273 | 35.26750 | NA | NA |
| 14964 | ENSMUSG00000073411 | H2-D1 | histocompatibility 2, D region locus 1 | non_coding_transcript_exon_variant | 1 | chr17 | 35.26273 | 35.26750 | NA | NA |
| 14964 | ENSMUSG00000073411 | H2-D1 | histocompatibility 2, D region locus 1 | missense_variant | 1 | chr17 | 35.26273 | 35.26750 | NA | NA |
| 14985 | ENSMUSG00000024448 | H2-M10.1 | histocompatibility 2, M region locus 10.1 | 3_prime_UTR_variant | 2 | chr17 | 36.32286 | 36.32615 | 4.417867 | 0.2128860 |
| 14985 | ENSMUSG00000024448 | H2-M10.1 | histocompatibility 2, M region locus 10.1 | synonymous_variant | 7 | chr17 | 36.32286 | 36.32615 | 4.417867 | 0.2128860 |
| 14985 | ENSMUSG00000024448 | H2-M10.1 | histocompatibility 2, M region locus 10.1 | missense_variant | 4 | chr17 | 36.32286 | 36.32615 | 4.417867 | 0.2128860 |
| 14985 | ENSMUSG00000024448 | H2-M10.1 | histocompatibility 2, M region locus 10.1 | splice_region_variant | 1 | chr17 | 36.32286 | 36.32615 | 4.417867 | 0.2128860 |
| 14985 | ENSMUSG00000024448 | H2-M10.1 | histocompatibility 2, M region locus 10.1 | downstream_gene_variant | 2 | chr17 | 36.32286 | 36.32615 | 4.417867 | 0.2128860 |
| 14990 | ENSMUSG00000016283 | H2-M2 | histocompatibility 2, M region locus 2 | stop_gained | 1 | chr17 | 37.48085 | 37.48355 | 7.964009 | 0.0024458 |
| 14990 | ENSMUSG00000016283 | H2-M2 | histocompatibility 2, M region locus 2 | synonymous_variant | 2 | chr17 | 37.48085 | 37.48355 | 7.964009 | 0.0024458 |
| 14990 | ENSMUSG00000016283 | H2-M2 | histocompatibility 2, M region locus 2 | missense_variant | 2 | chr17 | 37.48085 | 37.48355 | 7.964009 | 0.0024458 |
| 14990 | ENSMUSG00000016283 | H2-M2 | histocompatibility 2, M region locus 2 | splice_region_variant | 2 | chr17 | 37.48085 | 37.48355 | 7.964009 | 0.0024458 |
| 14991 | ENSMUSG00000016206 | H2-M3 | histocompatibility 2, M region locus 3 | missense_variant | 6 | chr17 | 37.27022 | 37.27448 | 7.392004 | 1.0000000 |
| 14991 | ENSMUSG00000016206 | H2-M3 | histocompatibility 2, M region locus 3 | 3_prime_UTR_variant | 3 | chr17 | 37.27022 | 37.27448 | 7.392004 | 1.0000000 |
| 14991 | ENSMUSG00000016206 | H2-M3 | histocompatibility 2, M region locus 3 | synonymous_variant | 9 | chr17 | 37.27022 | 37.27448 | 7.392004 | 1.0000000 |
| 14997 | ENSMUSG00000067201 | H2-M9 | histocompatibility 2, M region locus 9 | downstream_gene_variant | 1 | chr17 | 36.63929 | 36.64267 | 2.731606 | 0.0613346 |
| 14997 | ENSMUSG00000067201 | H2-M9 | histocompatibility 2, M region locus 9 | 3_prime_UTR_variant | 1 | chr17 | 36.63929 | 36.64267 | 2.731606 | 0.0613346 |
| 14997 | ENSMUSG00000067201 | H2-M9 | histocompatibility 2, M region locus 9 | splice_region_variant | 1 | chr17 | 36.63929 | 36.64267 | 2.731606 | 0.0613346 |
| 14997 | ENSMUSG00000067201 | H2-M9 | histocompatibility 2, M region locus 9 | synonymous_variant | 4 | chr17 | 36.63929 | 36.64267 | 2.731606 | 0.0613346 |
| 14997 | ENSMUSG00000067201 | H2-M9 | histocompatibility 2, M region locus 9 | intron_variant | 3 | chr17 | 36.63929 | 36.64267 | 2.731606 | 0.0613346 |
| 14997 | ENSMUSG00000067201 | H2-M9 | histocompatibility 2, M region locus 9 | missense_variant | 6 | chr17 | 36.63929 | 36.64267 | 2.731606 | 0.0613346 |
| 15006 | ENSMUSG00000079507 | H2-Q1 | histocompatibility 2, Q region locus 1 | non_coding_transcript_exon_variant | 20 | chr17 | 35.32041 | 35.32510 | 4.736061 | 1.0000000 |
| 15006 | ENSMUSG00000079507 | H2-Q1 | histocompatibility 2, Q region locus 1 | non_coding_transcript_variant | 20 | chr17 | 35.32041 | 35.32510 | 4.736061 | 1.0000000 |
| 15006 | ENSMUSG00000079507 | H2-Q1 | histocompatibility 2, Q region locus 1 | missense_variant | 6 | chr17 | 35.32041 | 35.32510 | 4.736061 | 1.0000000 |
| 15006 | ENSMUSG00000079507 | H2-Q1 | histocompatibility 2, Q region locus 1 | intron_variant | 10 | chr17 | 35.32041 | 35.32510 | 4.736061 | 1.0000000 |
| 15006 | ENSMUSG00000079507 | H2-Q1 | histocompatibility 2, Q region locus 1 | 3_prime_UTR_variant | 8 | chr17 | 35.32041 | 35.32510 | 4.736061 | 1.0000000 |
| 15007 | ENSMUSG00000067235 | H2-Q10 | histocompatibility 2, Q region locus 10 | synonymous_variant | 17 | chr17 | 35.47009 | 35.47456 | 3.777605 | 1.0000000 |
| 15007 | ENSMUSG00000067235 | H2-Q10 | histocompatibility 2, Q region locus 10 | splice_region_variant | 5 | chr17 | 35.47009 | 35.47456 | 3.777605 | 1.0000000 |
| 15007 | ENSMUSG00000067235 | H2-Q10 | histocompatibility 2, Q region locus 10 | non_coding_transcript_variant | 99 | chr17 | 35.47009 | 35.47456 | 3.777605 | 1.0000000 |
| 15007 | ENSMUSG00000067235 | H2-Q10 | histocompatibility 2, Q region locus 10 | intron_variant | 29 | chr17 | 35.47009 | 35.47456 | 3.777605 | 1.0000000 |
| 15007 | ENSMUSG00000067235 | H2-Q10 | histocompatibility 2, Q region locus 10 | non_coding_transcript_exon_variant | 99 | chr17 | 35.47009 | 35.47456 | 3.777605 | 1.0000000 |
| 15007 | ENSMUSG00000067235 | H2-Q10 | histocompatibility 2, Q region locus 10 | 3_prime_UTR_variant | 32 | chr17 | 35.47009 | 35.47456 | 3.777605 | 1.0000000 |
| 15007 | ENSMUSG00000067235 | H2-Q10 | histocompatibility 2, Q region locus 10 | missense_variant | 29 | chr17 | 35.47009 | 35.47456 | 3.777605 | 1.0000000 |
| 15013 | ENSMUSG00000091705 | H2-Q2 | histocompatibility 2, Q region locus 2 | 3_prime_UTR_variant | 7 | chr17 | 35.34224 | 35.34676 | NA | NA |
| 15013 | ENSMUSG00000091705 | H2-Q2 | histocompatibility 2, Q region locus 2 | synonymous_variant | 1 | chr17 | 35.34224 | 35.34676 | NA | NA |
| 15013 | ENSMUSG00000091705 | H2-Q2 | histocompatibility 2, Q region locus 2 | missense_variant | 2 | chr17 | 35.34224 | 35.34676 | NA | NA |
| 15013 | ENSMUSG00000091705 | H2-Q2 | histocompatibility 2, Q region locus 2 | downstream_gene_variant | 7 | chr17 | 35.34224 | 35.34676 | NA | NA |
| 15015 | ENSMUSG00000035929 | H2-Q4 | histocompatibility 2, Q region locus 4 | downstream_gene_variant | 1 | chr17 | 35.37962 | 35.38529 | 6.899890 | 1.0000000 |
| 15015 | ENSMUSG00000035929 | H2-Q4 | histocompatibility 2, Q region locus 4 | non_coding_transcript_exon_variant | 14 | chr17 | 35.37962 | 35.38529 | 6.899890 | 1.0000000 |
| 15015 | ENSMUSG00000035929 | H2-Q4 | histocompatibility 2, Q region locus 4 | 3_prime_UTR_variant | 4 | chr17 | 35.37962 | 35.38529 | 6.899890 | 1.0000000 |
| 15015 | ENSMUSG00000035929 | H2-Q4 | histocompatibility 2, Q region locus 4 | non_coding_transcript_variant | 14 | chr17 | 35.37962 | 35.38529 | 6.899890 | 1.0000000 |
| 15015 | ENSMUSG00000035929 | H2-Q4 | histocompatibility 2, Q region locus 4 | 5_prime_UTR_variant | 1 | chr17 | 35.37962 | 35.38529 | 6.899890 | 1.0000000 |
| 15015 | ENSMUSG00000035929 | H2-Q4 | histocompatibility 2, Q region locus 4 | missense_variant | 5 | chr17 | 35.37962 | 35.38529 | 6.899890 | 1.0000000 |
| 15015 | ENSMUSG00000035929 | H2-Q4 | histocompatibility 2, Q region locus 4 | synonymous_variant | 5 | chr17 | 35.37962 | 35.38529 | 6.899890 | 1.0000000 |
| 15018 | ENSMUSG00000060550 | H2-Q7 | histocompatibility 2, Q region locus 7 | non_coding_transcript_exon_variant | 1 | chr17 | 35.43915 | 35.44377 | NA | NA |
| 15018 | ENSMUSG00000060550 | H2-Q7 | histocompatibility 2, Q region locus 7 | intron_variant | 1 | chr17 | 35.43915 | 35.44377 | NA | NA |
| 15018 | ENSMUSG00000060550 | H2-Q7 | histocompatibility 2, Q region locus 7 | non_coding_transcript_variant | 1 | chr17 | 35.43915 | 35.44377 | NA | NA |
| 15018 | ENSMUSG00000060550 | H2-Q7 | histocompatibility 2, Q region locus 7 | upstream_gene_variant | 1 | chr17 | 35.43915 | 35.44377 | NA | NA |
| 15024 | ENSMUSG00000079491 | H2-T10 | histocompatibility 2, T region locus 10 | non_coding_transcript_exon_variant | 3 | chr17 | 36.11588 | 36.12147 | 3.246930 | 1.0000000 |
| 15024 | ENSMUSG00000079491 | H2-T10 | histocompatibility 2, T region locus 10 | intron_variant | 1 | chr17 | 36.11588 | 36.12147 | 3.246930 | 1.0000000 |
| 15024 | ENSMUSG00000079491 | H2-T10 | histocompatibility 2, T region locus 10 | non_coding_transcript_variant | 3 | chr17 | 36.11588 | 36.12147 | 3.246930 | 1.0000000 |
| 15024 | ENSMUSG00000079491 | H2-T10 | histocompatibility 2, T region locus 10 | 3_prime_UTR_variant | 2 | chr17 | 36.11588 | 36.12147 | 3.246930 | 1.0000000 |
| 15024 | ENSMUSG00000079491 | H2-T10 | histocompatibility 2, T region locus 10 | missense_variant | 2 | chr17 | 36.11588 | 36.12147 | 3.246930 | 1.0000000 |
| 15039 | ENSMUSG00000056116 | H2-T22 | histocompatibility 2, T region locus 22 | intron_variant | 3 | chr17 | 36.03713 | 36.04275 | NA | NA |
| 15039 | ENSMUSG00000056116 | H2-T22 | histocompatibility 2, T region locus 22 | stop_gained | 1 | chr17 | 36.03713 | 36.04275 | NA | NA |
| 15039 | ENSMUSG00000056116 | H2-T22 | histocompatibility 2, T region locus 22 | downstream_gene_variant | 14 | chr17 | 36.03713 | 36.04275 | NA | NA |
| 15039 | ENSMUSG00000056116 | H2-T22 | histocompatibility 2, T region locus 22 | missense_variant | 6 | chr17 | 36.03713 | 36.04275 | NA | NA |
| 15039 | ENSMUSG00000056116 | H2-T22 | histocompatibility 2, T region locus 22 | 5_prime_UTR_variant | 3 | chr17 | 36.03713 | 36.04275 | NA | NA |
| 15039 | ENSMUSG00000056116 | H2-T22 | histocompatibility 2, T region locus 22 | non_coding_transcript_exon_variant | 14 | chr17 | 36.03713 | 36.04275 | NA | NA |
| 15039 | ENSMUSG00000056116 | H2-T22 | histocompatibility 2, T region locus 22 | NMD_transcript_variant | 19 | chr17 | 36.03713 | 36.04275 | NA | NA |
| 15039 | ENSMUSG00000056116 | H2-T22 | histocompatibility 2, T region locus 22 | non_coding_transcript_variant | 14 | chr17 | 36.03713 | 36.04275 | NA | NA |
| 15039 | ENSMUSG00000056116 | H2-T22 | histocompatibility 2, T region locus 22 | downstream_gene_variant | 16 | chr17 | 36.03713 | 36.04275 | NA | NA |
| 15039 | ENSMUSG00000056116 | H2-T22 | histocompatibility 2, T region locus 22 | upstream_gene_variant | 17 | chr17 | 36.03713 | 36.04275 | NA | NA |
| 15039 | ENSMUSG00000056116 | H2-T22 | histocompatibility 2, T region locus 22 | non_coding_transcript_exon_variant | 35 | chr17 | 36.03713 | 36.04275 | NA | NA |
| 15039 | ENSMUSG00000056116 | H2-T22 | histocompatibility 2, T region locus 22 | 3_prime_UTR_variant | 12 | chr17 | 36.03713 | 36.04275 | NA | NA |
| 15039 | ENSMUSG00000056116 | H2-T22 | histocompatibility 2, T region locus 22 | synonymous_variant | 3 | chr17 | 36.03713 | 36.04275 | NA | NA |
| 15039 | ENSMUSG00000056116 | H2-T22 | histocompatibility 2, T region locus 22 | downstream_gene_variant | 60 | chr17 | 36.03713 | 36.04275 | NA | NA |
| 15039 | ENSMUSG00000056116 | H2-T22 | histocompatibility 2, T region locus 22 | non_coding_transcript_variant | 35 | chr17 | 36.03713 | 36.04275 | NA | NA |
| 15040 | ENSMUSG00000067212 | H2-T23 | histocompatibility 2, T region locus 23 | intron_variant | 76 | chr17 | 36.02977 | 36.03285 | NA | NA |
| 15040 | ENSMUSG00000067212 | H2-T23 | histocompatibility 2, T region locus 23 | upstream_gene_variant | 7 | chr17 | 36.02977 | 36.03285 | NA | NA |
| 15040 | ENSMUSG00000067212 | H2-T23 | histocompatibility 2, T region locus 23 | splice_region_variant | 7 | chr17 | 36.02977 | 36.03285 | NA | NA |
| 15040 | ENSMUSG00000067212 | H2-T23 | histocompatibility 2, T region locus 23 | non_coding_transcript_exon_variant | 200 | chr17 | 36.02977 | 36.03285 | NA | NA |
| 15040 | ENSMUSG00000067212 | H2-T23 | histocompatibility 2, T region locus 23 | 5_prime_UTR_variant | 4 | chr17 | 36.02977 | 36.03285 | NA | NA |
| 15040 | ENSMUSG00000067212 | H2-T23 | histocompatibility 2, T region locus 23 | missense_variant | 60 | chr17 | 36.02977 | 36.03285 | NA | NA |
| 15040 | ENSMUSG00000067212 | H2-T23 | histocompatibility 2, T region locus 23 | synonymous_variant | 42 | chr17 | 36.02977 | 36.03285 | NA | NA |
| 15040 | ENSMUSG00000067212 | H2-T23 | histocompatibility 2, T region locus 23 | non_coding_transcript_variant | 200 | chr17 | 36.02977 | 36.03285 | NA | NA |
| 15040 | ENSMUSG00000067212 | H2-T23 | histocompatibility 2, T region locus 23 | downstream_gene_variant | 97 | chr17 | 36.02977 | 36.03285 | NA | NA |
| 15040 | ENSMUSG00000067212 | H2-T23 | histocompatibility 2, T region locus 23 | 3_prime_UTR_variant | 19 | chr17 | 36.02977 | 36.03285 | NA | NA |
| 15040 | ENSMUSG00000067212 | H2-T23 | histocompatibility 2, T region locus 23 | upstream_gene_variant | 2 | chr17 | 36.02977 | 36.03285 | NA | NA |
| 15042 | ENSMUSG00000053835 | H2-T24 | histocompatibility 2, T region locus 24 | missense_variant | 23 | chr17 | 36.00570 | 36.02056 | 7.003082 | 1.0000000 |
| 15042 | ENSMUSG00000053835 | H2-T24 | histocompatibility 2, T region locus 24 | downstream_gene_variant | 13 | chr17 | 36.00570 | 36.02056 | 7.003082 | 1.0000000 |
| 15042 | ENSMUSG00000053835 | H2-T24 | histocompatibility 2, T region locus 24 | splice_region_variant | 1 | chr17 | 36.00570 | 36.02056 | 7.003082 | 1.0000000 |
| 15042 | ENSMUSG00000053835 | H2-T24 | histocompatibility 2, T region locus 24 | intron_variant | 23 | chr17 | 36.00570 | 36.02056 | 7.003082 | 1.0000000 |
| 15042 | ENSMUSG00000053835 | H2-T24 | histocompatibility 2, T region locus 24 | synonymous_variant | 13 | chr17 | 36.00570 | 36.02056 | 7.003082 | 1.0000000 |
| 15042 | ENSMUSG00000053835 | H2-T24 | histocompatibility 2, T region locus 24 | 3_prime_UTR_variant | 33 | chr17 | 36.00570 | 36.02056 | 7.003082 | 1.0000000 |
| 15043 | ENSMUSG00000054128 | H2-T3 | histocompatibility 2, T region locus 3 | intron_variant | 31 | chr17 | 36.18557 | 36.19029 | 6.209497 | 0.0094848 |
| 15043 | ENSMUSG00000054128 | H2-T3 | histocompatibility 2, T region locus 3 | missense_variant | 16 | chr17 | 36.18557 | 36.19029 | 6.209497 | 0.0094848 |
| 15043 | ENSMUSG00000054128 | H2-T3 | histocompatibility 2, T region locus 3 | NMD_transcript_variant | 39 | chr17 | 36.18557 | 36.19029 | 6.209497 | 0.0094848 |
| 15043 | ENSMUSG00000054128 | H2-T3 | histocompatibility 2, T region locus 3 | non_coding_transcript_exon_variant | 39 | chr17 | 36.18557 | 36.19029 | 6.209497 | 0.0094848 |
| 15043 | ENSMUSG00000054128 | H2-T3 | histocompatibility 2, T region locus 3 | non_coding_transcript_variant | 39 | chr17 | 36.18557 | 36.19029 | 6.209497 | 0.0094848 |
| 15043 | ENSMUSG00000054128 | H2-T3 | histocompatibility 2, T region locus 3 | synonymous_variant | 9 | chr17 | 36.18557 | 36.19029 | 6.209497 | 0.0094848 |
| 15043 | ENSMUSG00000054128 | H2-T3 | histocompatibility 2, T region locus 3 | 3_prime_UTR_variant | 39 | chr17 | 36.18557 | 36.19029 | 6.209497 | 0.0094848 |
| 15043 | ENSMUSG00000054128 | H2-T3 | histocompatibility 2, T region locus 3 | downstream_gene_variant | 16 | chr17 | 36.18557 | 36.19029 | 6.209497 | 0.0094848 |
| 15937 | ENSMUSG00000003541 | Ier3 | immediate early response 3 | synonymous_variant | 2 | chr17 | 35.82168 | 35.82292 | 8.121604 | 0.8305349 |
| 15937 | ENSMUSG00000003541 | Ier3 | immediate early response 3 | downstream_gene_variant | 11 | chr17 | 35.82168 | 35.82292 | 8.121604 | 0.8305349 |
| 15937 | ENSMUSG00000003541 | Ier3 | immediate early response 3 | 5_prime_UTR_variant | 1 | chr17 | 35.82168 | 35.82292 | 8.121604 | 0.8305349 |
| 15937 | ENSMUSG00000003541 | Ier3 | immediate early response 3 | missense_variant | 1 | chr17 | 35.82168 | 35.82292 | 8.121604 | 0.8305349 |
| 15937 | ENSMUSG00000003541 | Ier3 | immediate early response 3 | 3_prime_UTR_variant | 3 | chr17 | 35.82168 | 35.82292 | 8.121604 | 0.8305349 |
| 16992 | ENSMUSG00000024402 | Lta | lymphotoxin A | downstream_gene_variant | 25 | chr17 | 35.20316 | 35.20535 | 3.629005 | 1.0000000 |
| 16992 | ENSMUSG00000024402 | Lta | lymphotoxin A | 3_prime_UTR_variant | 1 | chr17 | 35.20316 | 35.20535 | 3.629005 | 1.0000000 |
| 16992 | ENSMUSG00000024402 | Lta | lymphotoxin A | missense_variant | 2 | chr17 | 35.20316 | 35.20535 | 3.629005 | 1.0000000 |
| 16992 | ENSMUSG00000024402 | Lta | lymphotoxin A | synonymous_variant | 1 | chr17 | 35.20316 | 35.20535 | 3.629005 | 1.0000000 |
| 16994 | ENSMUSG00000024399 | Ltb | lymphotoxin B | non_coding_transcript_exon_variant | 40 | chr17 | 35.19444 | 35.19632 | 7.555991 | 1.0000000 |
| 16994 | ENSMUSG00000024399 | Ltb | lymphotoxin B | missense_variant | 14 | chr17 | 35.19444 | 35.19632 | 7.555991 | 1.0000000 |
| 16994 | ENSMUSG00000024399 | Ltb | lymphotoxin B | 3_prime_UTR_variant | 6 | chr17 | 35.19444 | 35.19632 | 7.555991 | 1.0000000 |
| 16994 | ENSMUSG00000024399 | Ltb | lymphotoxin B | non_coding_transcript_variant | 40 | chr17 | 35.19444 | 35.19632 | 7.555991 | 1.0000000 |
| 16994 | ENSMUSG00000024399 | Ltb | lymphotoxin B | synonymous_variant | 17 | chr17 | 35.19444 | 35.19632 | 7.555991 | 1.0000000 |
| 16994 | ENSMUSG00000024399 | Ltb | lymphotoxin B | upstream_gene_variant | 2 | chr17 | 35.19444 | 35.19632 | 7.555991 | 1.0000000 |
| 16994 | ENSMUSG00000024399 | Ltb | lymphotoxin B | 5_prime_UTR_variant | 12 | chr17 | 35.19444 | 35.19632 | 7.555991 | 1.0000000 |
| 16994 | ENSMUSG00000024399 | Ltb | lymphotoxin B | non_coding_transcript_variant | 1 | chr17 | 35.19444 | 35.19632 | 7.555991 | 1.0000000 |
| 16994 | ENSMUSG00000024399 | Ltb | lymphotoxin B | intron_variant | 1 | chr17 | 35.19444 | 35.19632 | 7.555991 | 1.0000000 |
| 16994 | ENSMUSG00000024399 | Ltb | lymphotoxin B | intron_variant | 5 | chr17 | 35.19444 | 35.19632 | 7.555991 | 1.0000000 |
| 16994 | ENSMUSG00000024399 | Ltb | lymphotoxin B | downstream_gene_variant | 15 | chr17 | 35.19444 | 35.19632 | 7.555991 | 1.0000000 |
| 170648 | ENSMUSG00000057443 | Olfr138 | olfactory receptor 138 | downstream_gene_variant | 1 | chr17 | 38.27477 | 38.27571 | NA | NA |
| 170648 | ENSMUSG00000057443 | Olfr138 | olfactory receptor 138 | stop_gained | 1 | chr17 | 38.27477 | 38.27571 | NA | NA |
| 17441 | ENSMUSG00000076439 | Mog | myelin oligodendrocyte glycoprotein | downstream_gene_variant | 28 | chr17 | 37.01074 | 37.02340 | 4.051216 | 0.1134423 |
| 17441 | ENSMUSG00000076439 | Mog | myelin oligodendrocyte glycoprotein | synonymous_variant | 1 | chr17 | 37.01074 | 37.02340 | 4.051216 | 0.1134423 |
| 17441 | ENSMUSG00000076439 | Mog | myelin oligodendrocyte glycoprotein | missense_variant | 1 | chr17 | 37.01074 | 37.02340 | 4.051216 | 0.1134423 |
| 17441 | ENSMUSG00000076439 | Mog | myelin oligodendrocyte glycoprotein | 3_prime_UTR_variant | 13 | chr17 | 37.01074 | 37.02340 | 4.051216 | 0.1134423 |
| 17441 | ENSMUSG00000076439 | Mog | myelin oligodendrocyte glycoprotein | downstream_gene_variant | 13 | chr17 | 37.01074 | 37.02340 | 4.051216 | 0.1134423 |
| 17850 | ENSMUSG00000023921 | Mmut | methylmalonyl-Coenzyme A mutase | intron_variant | 6 | chr17 | 40.93469 | 40.96199 | 6.672319 | 0.0000000 |
| 17850 | ENSMUSG00000023921 | Mmut | methylmalonyl-Coenzyme A mutase | synonymous_variant | 10 | chr17 | 40.93469 | 40.96199 | 6.672319 | 0.0000000 |
| 17850 | ENSMUSG00000023921 | Mmut | methylmalonyl-Coenzyme A mutase | intron_variant | 4 | chr17 | 40.93469 | 40.96199 | 6.672319 | 0.0000000 |
| 17850 | ENSMUSG00000023921 | Mmut | methylmalonyl-Coenzyme A mutase | missense_variant | 1 | chr17 | 40.93469 | 40.96199 | 6.672319 | 0.0000000 |
| 17850 | ENSMUSG00000023921 | Mmut | methylmalonyl-Coenzyme A mutase | 5_prime_UTR_variant | 2 | chr17 | 40.93469 | 40.96199 | 6.672319 | 0.0000000 |
| 17850 | ENSMUSG00000023921 | Mmut | methylmalonyl-Coenzyme A mutase | upstream_gene_variant | 3 | chr17 | 40.93469 | 40.96199 | 6.672319 | 0.0000000 |
| 17850 | ENSMUSG00000023921 | Mmut | methylmalonyl-Coenzyme A mutase | 3_prime_UTR_variant | 44 | chr17 | 40.93469 | 40.96199 | 6.672319 | 0.0000000 |
| 17850 | ENSMUSG00000023921 | Mmut | methylmalonyl-Coenzyme A mutase | 5_prime_UTR_variant | 2 | chr17 | 40.93469 | 40.96199 | 6.672319 | 0.0000000 |
| 18038 | ENSMUSG00000042419 | Nfkbil1 | nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor like 1 | synonymous_variant | 4 | chr17 | 35.22017 | 35.23579 | 4.375774 | 0.0000727 |
| 18038 | ENSMUSG00000042419 | Nfkbil1 | nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor like 1 | intron_variant | 3 | chr17 | 35.22017 | 35.23579 | 4.375774 | 0.0000727 |
| 18038 | ENSMUSG00000042419 | Nfkbil1 | nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor like 1 | upstream_gene_variant | 62 | chr17 | 35.22017 | 35.23579 | 4.375774 | 0.0000727 |
| 18038 | ENSMUSG00000042419 | Nfkbil1 | nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor like 1 | non_coding_transcript_exon_variant | 9 | chr17 | 35.22017 | 35.23579 | 4.375774 | 0.0000727 |
| 18038 | ENSMUSG00000042419 | Nfkbil1 | nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor like 1 | missense_variant | 1 | chr17 | 35.22017 | 35.23579 | 4.375774 | 0.0000727 |
| 18038 | ENSMUSG00000042419 | Nfkbil1 | nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor like 1 | non_coding_transcript_variant | 9 | chr17 | 35.22017 | 35.23579 | 4.375774 | 0.0000727 |
| 18038 | ENSMUSG00000042419 | Nfkbil1 | nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor like 1 | missense_variant | 1 | chr17 | 35.22017 | 35.23579 | 4.375774 | 0.0000727 |
| 18038 | ENSMUSG00000042419 | Nfkbil1 | nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor like 1 | intron_variant | 5 | chr17 | 35.22017 | 35.23579 | 4.375774 | 0.0000727 |
| 18038 | ENSMUSG00000042419 | Nfkbil1 | nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor like 1 | 5_prime_UTR_variant | 1 | chr17 | 35.22017 | 35.23579 | 4.375774 | 0.0000727 |
| 18663 | ENSMUSG00000031233 | Pgk2 | phosphoglycerate kinase 2 | missense_variant | 3 | chr17 | 40.20701 | 40.20864 | 2.503900 | 0.2641614 |
| 18663 | ENSMUSG00000031233 | Pgk2 | phosphoglycerate kinase 2 | 3_prime_UTR_variant | 1 | chr17 | 40.20701 | 40.20864 | 2.503900 | 0.2641614 |
| 18999 | ENSMUSG00000024406 | Pou5f1 | POU domain, class 5, transcription factor 1 | downstream_gene_variant | 18 | chr17 | 35.50602 | 35.51077 | 4.753728 | 1.0000000 |
| 18999 | ENSMUSG00000024406 | Pou5f1 | POU domain, class 5, transcription factor 1 | intron_variant | 7 | chr17 | 35.50602 | 35.51077 | 4.753728 | 1.0000000 |
| 18999 | ENSMUSG00000024406 | Pou5f1 | POU domain, class 5, transcription factor 1 | 5_prime_UTR_variant | 8 | chr17 | 35.50602 | 35.51077 | 4.753728 | 1.0000000 |
| 18999 | ENSMUSG00000024406 | Pou5f1 | POU domain, class 5, transcription factor 1 | upstream_gene_variant | 8 | chr17 | 35.50602 | 35.51077 | 4.753728 | 1.0000000 |
| 18999 | ENSMUSG00000024406 | Pou5f1 | POU domain, class 5, transcription factor 1 | synonymous_variant | 1 | chr17 | 35.50602 | 35.51077 | 4.753728 | 1.0000000 |
| 18999 | ENSMUSG00000024406 | Pou5f1 | POU domain, class 5, transcription factor 1 | missense_variant | 1 | chr17 | 35.50602 | 35.51077 | 4.753728 | 1.0000000 |
| 195359 | ENSMUSG00000073399 | Trim40 | tripartite motif-containing 40 | 3_prime_UTR_variant | 40 | chr17 | 36.88160 | 36.89012 | 3.934068 | 1.0000000 |
| 195359 | ENSMUSG00000073399 | Trim40 | tripartite motif-containing 40 | intron_variant | 14 | chr17 | 36.88160 | 36.89012 | 3.934068 | 1.0000000 |
| 195359 | ENSMUSG00000073399 | Trim40 | tripartite motif-containing 40 | downstream_gene_variant | 16 | chr17 | 36.88160 | 36.89012 | 3.934068 | 1.0000000 |
| 195359 | ENSMUSG00000073399 | Trim40 | tripartite motif-containing 40 | synonymous_variant | 7 | chr17 | 36.88160 | 36.89012 | 3.934068 | 1.0000000 |
| 195359 | ENSMUSG00000073399 | Trim40 | tripartite motif-containing 40 | upstream_gene_variant | 17 | chr17 | 36.88160 | 36.89012 | 3.934068 | 1.0000000 |
| 195359 | ENSMUSG00000073399 | Trim40 | tripartite motif-containing 40 | non_coding_transcript_variant | 35 | chr17 | 36.88160 | 36.89012 | 3.934068 | 1.0000000 |
| 195359 | ENSMUSG00000073399 | Trim40 | tripartite motif-containing 40 | downstream_gene_variant | 48 | chr17 | 36.88160 | 36.89012 | 3.934068 | 1.0000000 |
| 195359 | ENSMUSG00000073399 | Trim40 | tripartite motif-containing 40 | non_coding_transcript_exon_variant | 25 | chr17 | 36.88160 | 36.89012 | 3.934068 | 1.0000000 |
| 195359 | ENSMUSG00000073399 | Trim40 | tripartite motif-containing 40 | 5_prime_UTR_variant | 17 | chr17 | 36.88160 | 36.89012 | 3.934068 | 1.0000000 |
| 195359 | ENSMUSG00000073399 | Trim40 | tripartite motif-containing 40 | missense_variant | 5 | chr17 | 36.88160 | 36.89012 | 3.934068 | 1.0000000 |
| 19743 | ENSMUSG00000023926 | Rhag | Rhesus blood group-associated A glycoprotein | 3_prime_UTR_variant | 3 | chr17 | 40.81113 | 40.84075 | 2.962647 | 0.1257592 |
| 19743 | ENSMUSG00000023926 | Rhag | Rhesus blood group-associated A glycoprotein | synonymous_variant | 4 | chr17 | 40.81113 | 40.84075 | 2.962647 | 0.1257592 |
| 19743 | ENSMUSG00000023926 | Rhag | Rhesus blood group-associated A glycoprotein | 5_prime_UTR_variant | 2 | chr17 | 40.81113 | 40.84075 | 2.962647 | 0.1257592 |
| 19743 | ENSMUSG00000023926 | Rhag | Rhesus blood group-associated A glycoprotein | upstream_gene_variant | 1 | chr17 | 40.81113 | 40.84075 | 2.962647 | 0.1257592 |
| 19743 | ENSMUSG00000023926 | Rhag | Rhesus blood group-associated A glycoprotein | missense_variant | 6 | chr17 | 40.81113 | 40.84075 | 2.962647 | 0.1257592 |
| 19824 | ENSMUSG00000073400 | Trim10 | tripartite motif-containing 10 | 5_prime_UTR_variant | 1 | chr17 | 36.86957 | 36.87783 | 3.806713 | 0.0002576 |
| 19824 | ENSMUSG00000073400 | Trim10 | tripartite motif-containing 10 | downstream_gene_variant | 42 | chr17 | 36.86957 | 36.87783 | 3.806713 | 0.0002576 |
| 19824 | ENSMUSG00000073400 | Trim10 | tripartite motif-containing 10 | missense_variant | 5 | chr17 | 36.86957 | 36.87783 | 3.806713 | 0.0002576 |
| 19824 | ENSMUSG00000073400 | Trim10 | tripartite motif-containing 10 | synonymous_variant | 8 | chr17 | 36.86957 | 36.87783 | 3.806713 | 0.0002576 |
| 19824 | ENSMUSG00000073400 | Trim10 | tripartite motif-containing 10 | upstream_gene_variant | 12 | chr17 | 36.86957 | 36.87783 | 3.806713 | 0.0002576 |
| 19824 | ENSMUSG00000073400 | Trim10 | tripartite motif-containing 10 | 3_prime_UTR_variant | 6 | chr17 | 36.86957 | 36.87783 | 3.806713 | 0.0002576 |
| 21926 | ENSMUSG00000024401 | Tnf | tumor necrosis factor | upstream_gene_variant | 4 | chr17 | 35.19938 | 35.20201 | 7.282764 | 0.0000002 |
| 21926 | ENSMUSG00000024401 | Tnf | tumor necrosis factor | downstream_gene_variant | 40 | chr17 | 35.19938 | 35.20201 | 7.282764 | 0.0000002 |
| 21926 | ENSMUSG00000024401 | Tnf | tumor necrosis factor | downstream_gene_variant | 1 | chr17 | 35.19938 | 35.20201 | 7.282764 | 0.0000002 |
| 21926 | ENSMUSG00000024401 | Tnf | tumor necrosis factor | 3_prime_UTR_variant | 13 | chr17 | 35.19938 | 35.20201 | 7.282764 | 0.0000002 |
| 21926 | ENSMUSG00000024401 | Tnf | tumor necrosis factor | 5_prime_UTR_variant | 8 | chr17 | 35.19938 | 35.20201 | 7.282764 | 0.0000002 |
| 21926 | ENSMUSG00000024401 | Tnf | tumor necrosis factor | downstream_gene_variant | 1 | chr17 | 35.19938 | 35.20201 | 7.282764 | 0.0000002 |
| 21926 | ENSMUSG00000024401 | Tnf | tumor necrosis factor | synonymous_variant | 4 | chr17 | 35.19938 | 35.20201 | 7.282764 | 0.0000002 |
| 22024 | ENSMUSG00000023930 | Crisp2 | cysteine-rich secretory protein 2 | synonymous_variant | 1 | chr17 | 40.76402 | 40.80700 | 2.451533 | 1.0000000 |
| 22024 | ENSMUSG00000023930 | Crisp2 | cysteine-rich secretory protein 2 | intron_variant | 4 | chr17 | 40.76402 | 40.80700 | 2.451533 | 1.0000000 |
| 22024 | ENSMUSG00000023930 | Crisp2 | cysteine-rich secretory protein 2 | downstream_gene_variant | 2 | chr17 | 40.76402 | 40.80700 | 2.451533 | 1.0000000 |
| 22024 | ENSMUSG00000023930 | Crisp2 | cysteine-rich secretory protein 2 | 3_prime_UTR_variant | 6 | chr17 | 40.76402 | 40.80700 | 2.451533 | 1.0000000 |
| 22024 | ENSMUSG00000023930 | Crisp2 | cysteine-rich secretory protein 2 | non_coding_transcript_variant | 5 | chr17 | 40.76402 | 40.80700 | 2.451533 | 1.0000000 |
| 22024 | ENSMUSG00000023930 | Crisp2 | cysteine-rich secretory protein 2 | upstream_gene_variant | 4 | chr17 | 40.76402 | 40.80700 | 2.451533 | 1.0000000 |
| 22024 | ENSMUSG00000023930 | Crisp2 | cysteine-rich secretory protein 2 | 5_prime_UTR_variant | 4 | chr17 | 40.76402 | 40.80700 | 2.451533 | 1.0000000 |
| 22024 | ENSMUSG00000023930 | Crisp2 | cysteine-rich secretory protein 2 | non_coding_transcript_exon_variant | 1 | chr17 | 40.76402 | 40.80700 | 2.451533 | 1.0000000 |
| 22024 | ENSMUSG00000023930 | Crisp2 | cysteine-rich secretory protein 2 | NMD_transcript_variant | 1 | chr17 | 40.76402 | 40.80700 | 2.451533 | 1.0000000 |
| 22024 | ENSMUSG00000023930 | Crisp2 | cysteine-rich secretory protein 2 | upstream_gene_variant | 5 | chr17 | 40.76402 | 40.80700 | 2.451533 | 1.0000000 |
| 22154 | ENSMUSG00000001525 | Tubb5 | tubulin, beta 5 class I | synonymous_variant | 8 | chr17 | 35.83392 | 35.83831 | 9.156726 | 1.0000000 |
| 22154 | ENSMUSG00000001525 | Tubb5 | tubulin, beta 5 class I | upstream_gene_variant | 3 | chr17 | 35.83392 | 35.83831 | 9.156726 | 1.0000000 |
| 22154 | ENSMUSG00000001525 | Tubb5 | tubulin, beta 5 class I | non_coding_transcript_variant | 14 | chr17 | 35.83392 | 35.83831 | 9.156726 | 1.0000000 |
| 22154 | ENSMUSG00000001525 | Tubb5 | tubulin, beta 5 class I | upstream_gene_variant | 4 | chr17 | 35.83392 | 35.83831 | 9.156726 | 1.0000000 |
| 22154 | ENSMUSG00000001525 | Tubb5 | tubulin, beta 5 class I | non_coding_transcript_exon_variant | 14 | chr17 | 35.83392 | 35.83831 | 9.156726 | 1.0000000 |
| 22154 | ENSMUSG00000001525 | Tubb5 | tubulin, beta 5 class I | intron_variant | 6 | chr17 | 35.83392 | 35.83831 | 9.156726 | 1.0000000 |
| 22154 | ENSMUSG00000001525 | Tubb5 | tubulin, beta 5 class I | downstream_gene_variant | 19 | chr17 | 35.83392 | 35.83831 | 9.156726 | 1.0000000 |
| 22154 | ENSMUSG00000001525 | Tubb5 | tubulin, beta 5 class I | downstream_gene_variant | 19 | chr17 | 35.83392 | 35.83831 | 9.156726 | 1.0000000 |
| 22154 | ENSMUSG00000001525 | Tubb5 | tubulin, beta 5 class I | 3_prime_UTR_variant | 11 | chr17 | 35.83392 | 35.83831 | 9.156726 | 1.0000000 |
| 22154 | ENSMUSG00000001525 | Tubb5 | tubulin, beta 5 class I | 5_prime_UTR_variant | 8 | chr17 | 35.83392 | 35.83831 | 9.156726 | 1.0000000 |
| 224742 | ENSMUSG00000038762 | Abcf1 | ATP-binding cassette, sub-family F (GCN20), member 1 | non_coding_transcript_variant | 11 | chr17 | 35.95682 | 35.96976 | 6.200157 | 1.0000000 |
| 224742 | ENSMUSG00000038762 | Abcf1 | ATP-binding cassette, sub-family F (GCN20), member 1 | downstream_gene_variant | 16 | chr17 | 35.95682 | 35.96976 | 6.200157 | 1.0000000 |
| 224742 | ENSMUSG00000038762 | Abcf1 | ATP-binding cassette, sub-family F (GCN20), member 1 | upstream_gene_variant | 12 | chr17 | 35.95682 | 35.96976 | 6.200157 | 1.0000000 |
| 224742 | ENSMUSG00000038762 | Abcf1 | ATP-binding cassette, sub-family F (GCN20), member 1 | 5_prime_UTR_variant | 1 | chr17 | 35.95682 | 35.96976 | 6.200157 | 1.0000000 |
| 224742 | ENSMUSG00000038762 | Abcf1 | ATP-binding cassette, sub-family F (GCN20), member 1 | synonymous_variant | 4 | chr17 | 35.95682 | 35.96976 | 6.200157 | 1.0000000 |
| 224742 | ENSMUSG00000038762 | Abcf1 | ATP-binding cassette, sub-family F (GCN20), member 1 | intron_variant | 3 | chr17 | 35.95682 | 35.96976 | 6.200157 | 1.0000000 |
| 224742 | ENSMUSG00000038762 | Abcf1 | ATP-binding cassette, sub-family F (GCN20), member 1 | non_coding_transcript_exon_variant | 11 | chr17 | 35.95682 | 35.96976 | 6.200157 | 1.0000000 |
| 224742 | ENSMUSG00000038762 | Abcf1 | ATP-binding cassette, sub-family F (GCN20), member 1 | downstream_gene_variant | 1 | chr17 | 35.95682 | 35.96976 | 6.200157 | 1.0000000 |
| 224742 | ENSMUSG00000038762 | Abcf1 | ATP-binding cassette, sub-family F (GCN20), member 1 | 3_prime_UTR_variant | 7 | chr17 | 35.95682 | 35.96976 | 6.200157 | 1.0000000 |
| 224742 | ENSMUSG00000038762 | Abcf1 | ATP-binding cassette, sub-family F (GCN20), member 1 | upstream_gene_variant | 12 | chr17 | 35.95682 | 35.96976 | 6.200157 | 1.0000000 |
| 224742 | ENSMUSG00000038762 | Abcf1 | ATP-binding cassette, sub-family F (GCN20), member 1 | missense_variant | 5 | chr17 | 35.95682 | 35.96976 | 6.200157 | 1.0000000 |
| 224742 | ENSMUSG00000038762 | Abcf1 | ATP-binding cassette, sub-family F (GCN20), member 1 | upstream_gene_variant | 1 | chr17 | 35.95682 | 35.96976 | 6.200157 | 1.0000000 |
| 224742 | ENSMUSG00000038762 | Abcf1 | ATP-binding cassette, sub-family F (GCN20), member 1 | NMD_transcript_variant | 3 | chr17 | 35.95682 | 35.96976 | 6.200157 | 1.0000000 |
| 224742 | ENSMUSG00000038762 | Abcf1 | ATP-binding cassette, sub-family F (GCN20), member 1 | intron_variant | 1 | chr17 | 35.95682 | 35.96976 | 6.200157 | 1.0000000 |
| 224753 | ENSMUSG00000048231 | H2-M10.4 | histocompatibility 2, M region locus 10.4 | splice_region_variant | 1 | chr17 | 36.45892 | 36.46233 | 2.092563 | 1.0000000 |
| 224753 | ENSMUSG00000048231 | H2-M10.4 | histocompatibility 2, M region locus 10.4 | missense_variant | 7 | chr17 | 36.45892 | 36.46233 | 2.092563 | 1.0000000 |
| 224753 | ENSMUSG00000048231 | H2-M10.4 | histocompatibility 2, M region locus 10.4 | downstream_gene_variant | 1 | chr17 | 36.45892 | 36.46233 | 2.092563 | 1.0000000 |
| 224753 | ENSMUSG00000048231 | H2-M10.4 | histocompatibility 2, M region locus 10.4 | synonymous_variant | 6 | chr17 | 36.45892 | 36.46233 | 2.092563 | 1.0000000 |
| 224753 | ENSMUSG00000048231 | H2-M10.4 | histocompatibility 2, M region locus 10.4 | 3_prime_UTR_variant | 1 | chr17 | 36.45892 | 36.46233 | 2.092563 | 1.0000000 |
| 224754 | ENSMUSG00000037537 | H2-M11 | histocompatibility 2, M region locus 11 | missense_variant | 7 | chr17 | 36.54707 | 36.54925 | 2.397954 | 0.1354783 |
| 224754 | ENSMUSG00000037537 | H2-M11 | histocompatibility 2, M region locus 11 | synonymous_variant | 6 | chr17 | 36.54707 | 36.54925 | 2.397954 | 0.1354783 |
| 224756 | ENSMUSG00000037334 | H2-M1 | histocompatibility 2, M region locus 1 | synonymous_variant | 9 | chr17 | 36.67001 | 36.67222 | 2.607213 | 0.2380211 |
| 224756 | ENSMUSG00000037334 | H2-M1 | histocompatibility 2, M region locus 1 | missense_variant | 11 | chr17 | 36.67001 | 36.67222 | 2.607213 | 0.2380211 |
| 224761 | ENSMUSG00000037246 | H2-M10.5 | histocompatibility 2, M region locus 10.5 | splice_region_variant | 1 | chr17 | 36.77291 | 36.77623 | 2.434949 | 0.1934362 |
| 224761 | ENSMUSG00000037246 | H2-M10.5 | histocompatibility 2, M region locus 10.5 | synonymous_variant | 5 | chr17 | 36.77291 | 36.77623 | 2.434949 | 0.1934362 |
| 224761 | ENSMUSG00000037246 | H2-M10.5 | histocompatibility 2, M region locus 10.5 | 3_prime_UTR_variant | 12 | chr17 | 36.77291 | 36.77623 | 2.434949 | 0.1934362 |
| 224761 | ENSMUSG00000037246 | H2-M10.5 | histocompatibility 2, M region locus 10.5 | missense_variant | 8 | chr17 | 36.77291 | 36.77623 | 2.434949 | 0.1934362 |
| 224762 | ENSMUSG00000058063 | Trim31 | tripartite motif-containing 31 | 3_prime_UTR_variant | 3 | chr17 | 36.89812 | 36.91021 | 3.162820 | 0.0029135 |
| 224762 | ENSMUSG00000058063 | Trim31 | tripartite motif-containing 31 | 5_prime_UTR_variant | 7 | chr17 | 36.89812 | 36.91021 | 3.162820 | 0.0029135 |
| 224762 | ENSMUSG00000058063 | Trim31 | tripartite motif-containing 31 | synonymous_variant | 8 | chr17 | 36.89812 | 36.91021 | 3.162820 | 0.0029135 |
| 224762 | ENSMUSG00000058063 | Trim31 | tripartite motif-containing 31 | missense_variant | 3 | chr17 | 36.89812 | 36.91021 | 3.162820 | 0.0029135 |
| 22670 | ENSMUSG00000024457 | Trim26 | tripartite motif-containing 26 | downstream_gene_variant | 60 | chr17 | 36.83713 | 36.85940 | 6.533924 | 0.0366175 |
| 22670 | ENSMUSG00000024457 | Trim26 | tripartite motif-containing 26 | non_coding_transcript_exon_variant | 140 | chr17 | 36.83713 | 36.85940 | 6.533924 | 0.0366175 |
| 22670 | ENSMUSG00000024457 | Trim26 | tripartite motif-containing 26 | downstream_gene_variant | 116 | chr17 | 36.83713 | 36.85940 | 6.533924 | 0.0366175 |
| 22670 | ENSMUSG00000024457 | Trim26 | tripartite motif-containing 26 | missense_variant | 2 | chr17 | 36.83713 | 36.85940 | 6.533924 | 0.0366175 |
| 22670 | ENSMUSG00000024457 | Trim26 | tripartite motif-containing 26 | non_coding_transcript_variant | 140 | chr17 | 36.83713 | 36.85940 | 6.533924 | 0.0366175 |
| 22670 | ENSMUSG00000024457 | Trim26 | tripartite motif-containing 26 | 5_prime_UTR_variant | 10 | chr17 | 36.83713 | 36.85940 | 6.533924 | 0.0366175 |
| 22670 | ENSMUSG00000024457 | Trim26 | tripartite motif-containing 26 | synonymous_variant | 38 | chr17 | 36.83713 | 36.85940 | 6.533924 | 0.0366175 |
| 22670 | ENSMUSG00000024457 | Trim26 | tripartite motif-containing 26 | 3_prime_UTR_variant | 35 | chr17 | 36.83713 | 36.85940 | 6.533924 | 0.0366175 |
| 22670 | ENSMUSG00000024457 | Trim26 | tripartite motif-containing 26 | intron_variant | 113 | chr17 | 36.83713 | 36.85940 | 6.533924 | 0.0366175 |
| 22670 | ENSMUSG00000024457 | Trim26 | tripartite motif-containing 26 | upstream_gene_variant | 60 | chr17 | 36.83713 | 36.85940 | 6.533924 | 0.0366175 |
| 22715 | ENSMUSG00000036036 | Zfp57 | zinc finger protein 57 | downstream_gene_variant | 60 | chr17 | 37.00116 | 37.01064 | 5.172439 | 1.0000000 |
| 22715 | ENSMUSG00000036036 | Zfp57 | zinc finger protein 57 | 3_prime_UTR_variant | 4 | chr17 | 37.00116 | 37.01064 | 5.172439 | 1.0000000 |
| 22715 | ENSMUSG00000036036 | Zfp57 | zinc finger protein 57 | non_coding_transcript_exon_variant | 50 | chr17 | 37.00116 | 37.01064 | 5.172439 | 1.0000000 |
| 22715 | ENSMUSG00000036036 | Zfp57 | zinc finger protein 57 | missense_variant | 7 | chr17 | 37.00116 | 37.01064 | 5.172439 | 1.0000000 |
| 22715 | ENSMUSG00000036036 | Zfp57 | zinc finger protein 57 | splice_region_variant | 3 | chr17 | 37.00116 | 37.01064 | 5.172439 | 1.0000000 |
| 22715 | ENSMUSG00000036036 | Zfp57 | zinc finger protein 57 | intron_variant | 70 | chr17 | 37.00116 | 37.01064 | 5.172439 | 1.0000000 |
| 22715 | ENSMUSG00000036036 | Zfp57 | zinc finger protein 57 | non_coding_transcript_variant | 53 | chr17 | 37.00116 | 37.01064 | 5.172439 | 1.0000000 |
| 22715 | ENSMUSG00000036036 | Zfp57 | zinc finger protein 57 | 5_prime_UTR_variant | 67 | chr17 | 37.00116 | 37.01064 | 5.172439 | 1.0000000 |
| 22715 | ENSMUSG00000036036 | Zfp57 | zinc finger protein 57 | synonymous_variant | 15 | chr17 | 37.00116 | 37.01064 | 5.172439 | 1.0000000 |
| 22715 | ENSMUSG00000036036 | Zfp57 | zinc finger protein 57 | downstream_gene_variant | 13 | chr17 | 37.00116 | 37.01064 | 5.172439 | 1.0000000 |
| 22715 | ENSMUSG00000036036 | Zfp57 | zinc finger protein 57 | upstream_gene_variant | 61 | chr17 | 37.00116 | 37.01064 | 5.172439 | 1.0000000 |
| 240084 | ENSMUSG00000040312 | Cchcr1 | coiled-coil alpha-helical rod protein 1 | upstream_gene_variant | 34 | chr17 | 35.51710 | 35.53101 | 4.782821 | 0.0161789 |
| 240084 | ENSMUSG00000040312 | Cchcr1 | coiled-coil alpha-helical rod protein 1 | synonymous_variant | 26 | chr17 | 35.51710 | 35.53101 | 4.782821 | 0.0161789 |
| 240084 | ENSMUSG00000040312 | Cchcr1 | coiled-coil alpha-helical rod protein 1 | intron_variant | 46 | chr17 | 35.51710 | 35.53101 | 4.782821 | 0.0161789 |
| 240084 | ENSMUSG00000040312 | Cchcr1 | coiled-coil alpha-helical rod protein 1 | non_coding_transcript_exon_variant | 62 | chr17 | 35.51710 | 35.53101 | 4.782821 | 0.0161789 |
| 240084 | ENSMUSG00000040312 | Cchcr1 | coiled-coil alpha-helical rod protein 1 | upstream_gene_variant | 59 | chr17 | 35.51710 | 35.53101 | 4.782821 | 0.0161789 |
| 240084 | ENSMUSG00000040312 | Cchcr1 | coiled-coil alpha-helical rod protein 1 | non_coding_transcript_variant | 63 | chr17 | 35.51710 | 35.53101 | 4.782821 | 0.0161789 |
| 240084 | ENSMUSG00000040312 | Cchcr1 | coiled-coil alpha-helical rod protein 1 | 5_prime_UTR_variant | 1 | chr17 | 35.51710 | 35.53101 | 4.782821 | 0.0161789 |
| 240084 | ENSMUSG00000040312 | Cchcr1 | coiled-coil alpha-helical rod protein 1 | missense_variant | 7 | chr17 | 35.51710 | 35.53101 | 4.782821 | 0.0161789 |
| 240084 | ENSMUSG00000040312 | Cchcr1 | coiled-coil alpha-helical rod protein 1 | downstream_gene_variant | 2 | chr17 | 35.51710 | 35.53101 | 4.782821 | 0.0161789 |
| 240084 | ENSMUSG00000040312 | Cchcr1 | coiled-coil alpha-helical rod protein 1 | 3_prime_UTR_variant | 3 | chr17 | 35.51710 | 35.53101 | 4.782821 | 0.0161789 |
| 240084 | ENSMUSG00000040312 | Cchcr1 | coiled-coil alpha-helical rod protein 1 | downstream_gene_variant | 43 | chr17 | 35.51710 | 35.53101 | 4.782821 | 0.0161789 |
| 240087 | ENSMUSG00000061607 | Mdc1 | mediator of DNA damage checkpoint 1 | 3_prime_UTR_variant | 21 | chr17 | 35.84152 | 35.85967 | 5.526448 | 0.1823571 |
| 240087 | ENSMUSG00000061607 | Mdc1 | mediator of DNA damage checkpoint 1 | downstream_gene_variant | 5 | chr17 | 35.84152 | 35.85967 | 5.526448 | 0.1823571 |
| 240087 | ENSMUSG00000061607 | Mdc1 | mediator of DNA damage checkpoint 1 | upstream_gene_variant | 8 | chr17 | 35.84152 | 35.85967 | 5.526448 | 0.1823571 |
| 240087 | ENSMUSG00000061607 | Mdc1 | mediator of DNA damage checkpoint 1 | missense_variant | 8 | chr17 | 35.84152 | 35.85967 | 5.526448 | 0.1823571 |
| 240087 | ENSMUSG00000061607 | Mdc1 | mediator of DNA damage checkpoint 1 | downstream_gene_variant | 6 | chr17 | 35.84152 | 35.85967 | 5.526448 | 0.1823571 |
| 240087 | ENSMUSG00000061607 | Mdc1 | mediator of DNA damage checkpoint 1 | upstream_gene_variant | 3 | chr17 | 35.84152 | 35.85967 | 5.526448 | 0.1823571 |
| 240087 | ENSMUSG00000061607 | Mdc1 | mediator of DNA damage checkpoint 1 | synonymous_variant | 9 | chr17 | 35.84152 | 35.85967 | 5.526448 | 0.1823571 |
| 240087 | ENSMUSG00000061607 | Mdc1 | mediator of DNA damage checkpoint 1 | 5_prime_UTR_variant | 3 | chr17 | 35.84152 | 35.85967 | 5.526448 | 0.1823571 |
| 240095 | ENSMUSG00000024459 | H2-M5 | histocompatibility 2, M region locus 5 | missense_variant | 13 | chr17 | 36.98406 | 36.98954 | 5.016815 | 0.0256662 |
| 240095 | ENSMUSG00000024459 | H2-M5 | histocompatibility 2, M region locus 5 | intron_variant | 10 | chr17 | 36.98406 | 36.98954 | 5.016815 | 0.0256662 |
| 240095 | ENSMUSG00000024459 | H2-M5 | histocompatibility 2, M region locus 5 | non_coding_transcript_exon_variant | 38 | chr17 | 36.98406 | 36.98954 | 5.016815 | 0.0256662 |
| 240095 | ENSMUSG00000024459 | H2-M5 | histocompatibility 2, M region locus 5 | synonymous_variant | 7 | chr17 | 36.98406 | 36.98954 | 5.016815 | 0.0256662 |
| 240095 | ENSMUSG00000024459 | H2-M5 | histocompatibility 2, M region locus 5 | downstream_gene_variant | 11 | chr17 | 36.98406 | 36.98954 | 5.016815 | 0.0256662 |
| 240095 | ENSMUSG00000024459 | H2-M5 | histocompatibility 2, M region locus 5 | upstream_gene_variant | 9 | chr17 | 36.98406 | 36.98954 | 5.016815 | 0.0256662 |
| 240095 | ENSMUSG00000024459 | H2-M5 | histocompatibility 2, M region locus 5 | non_coding_transcript_variant | 38 | chr17 | 36.98406 | 36.98954 | 5.016815 | 0.0256662 |
| 24108 | ENSMUSG00000035186 | Ubd | ubiquitin D | downstream_gene_variant | 18 | chr17 | 37.19389 | 37.19609 | 6.361997 | 1.0000000 |
| 257889 | ENSMUSG00000067186 | Olfr132 | olfactory receptor 132 | missense_variant | 1 | chr17 | 38.13025 | 38.13119 | 2.499617 | 0.0112093 |
| 257908 | ENSMUSG00000092413 | Olfr115 | olfactory receptor 115 | missense_variant | 4 | chr17 | 37.60982 | 37.61075 | 3.066677 | 0.2173062 |
| 257908 | ENSMUSG00000092413 | Olfr115 | olfactory receptor 115 | intron_variant | 2 | chr17 | 37.60982 | 37.61075 | 3.066677 | 0.2173062 |
| 258051 | ENSMUSG00000091601 | Olfr93 | olfactory receptor 93 | synonymous_variant | 9 | chr17 | 37.15101 | 37.15205 | 4.843277 | 0.0029392 |
| 258051 | ENSMUSG00000091601 | Olfr93 | olfactory receptor 93 | missense_variant | 4 | chr17 | 37.15101 | 37.15205 | 4.843277 | 0.0029392 |
| 258051 | ENSMUSG00000091601 | Olfr93 | olfactory receptor 93 | 5_prime_UTR_variant | 2 | chr17 | 37.15101 | 37.15205 | 4.843277 | 0.0029392 |
| 258095 | ENSMUSG00000059964 | Olfr119 | olfactory receptor 119 | 5_prime_UTR_variant | 10 | chr17 | 37.69656 | 37.70212 | 4.692556 | 0.0011860 |
| 258095 | ENSMUSG00000059964 | Olfr119 | olfactory receptor 119 | missense_variant | 4 | chr17 | 37.69656 | 37.70212 | 4.692556 | 0.0011860 |
| 258095 | ENSMUSG00000059964 | Olfr119 | olfactory receptor 119 | intron_variant | 1 | chr17 | 37.69656 | 37.70212 | 4.692556 | 0.0011860 |
| 258095 | ENSMUSG00000059964 | Olfr119 | olfactory receptor 119 | synonymous_variant | 5 | chr17 | 37.69656 | 37.70212 | 4.692556 | 0.0011860 |
| 258095 | ENSMUSG00000059964 | Olfr119 | olfactory receptor 119 | 3_prime_UTR_variant | 1 | chr17 | 37.69656 | 37.70212 | 4.692556 | 0.0011860 |
| 258095 | ENSMUSG00000059964 | Olfr119 | olfactory receptor 119 | downstream_gene_variant | 2 | chr17 | 37.69656 | 37.70212 | 4.692556 | 0.0011860 |
| 258096 | ENSMUSG00000051611 | Olfr112 | olfactory receptor 112 | 5_prime_UTR_variant | 100 | chr17 | 37.56167 | 37.56945 | 2.420844 | 1.0000000 |
| 258096 | ENSMUSG00000051611 | Olfr112 | olfactory receptor 112 | downstream_gene_variant | 23 | chr17 | 37.56167 | 37.56945 | 2.420844 | 1.0000000 |
| 258096 | ENSMUSG00000051611 | Olfr112 | olfactory receptor 112 | non_coding_transcript_exon_variant | 48 | chr17 | 37.56167 | 37.56945 | 2.420844 | 1.0000000 |
| 258096 | ENSMUSG00000051611 | Olfr112 | olfactory receptor 112 | non_coding_transcript_variant | 86 | chr17 | 37.56167 | 37.56945 | 2.420844 | 1.0000000 |
| 258096 | ENSMUSG00000051611 | Olfr112 | olfactory receptor 112 | 3_prime_UTR_variant | 4 | chr17 | 37.56167 | 37.56945 | 2.420844 | 1.0000000 |
| 258096 | ENSMUSG00000051611 | Olfr112 | olfactory receptor 112 | upstream_gene_variant | 109 | chr17 | 37.56167 | 37.56945 | 2.420844 | 1.0000000 |
| 258096 | ENSMUSG00000051611 | Olfr112 | olfactory receptor 112 | missense_variant | 50 | chr17 | 37.56167 | 37.56945 | 2.420844 | 1.0000000 |
| 258096 | ENSMUSG00000051611 | Olfr112 | olfactory receptor 112 | intron_variant | 76 | chr17 | 37.56167 | 37.56945 | 2.420844 | 1.0000000 |
| 258096 | ENSMUSG00000051611 | Olfr112 | olfactory receptor 112 | synonymous_variant | 41 | chr17 | 37.56167 | 37.56945 | 2.420844 | 1.0000000 |
| 258218 | ENSMUSG00000091531 | Olfr102 | olfactory receptor 102 | 3_prime_UTR_variant | 1 | chr17 | 37.31341 | 37.31444 | 1.716622 | 0.0097401 |
| 258218 | ENSMUSG00000091531 | Olfr102 | olfactory receptor 102 | missense_variant | 1 | chr17 | 37.31341 | 37.31444 | 1.716622 | 0.0097401 |
| 258218 | ENSMUSG00000091531 | Olfr102 | olfactory receptor 102 | synonymous_variant | 4 | chr17 | 37.31341 | 37.31444 | 1.716622 | 0.0097401 |
| 258219 | ENSMUSG00000043827 | Olfr94 | olfactory receptor 94 | synonymous_variant | 8 | chr17 | 37.19671 | 37.19801 | 3.909441 | 0.0226176 |
| 258219 | ENSMUSG00000043827 | Olfr94 | olfactory receptor 94 | 5_prime_UTR_variant | 4 | chr17 | 37.19671 | 37.19801 | 3.909441 | 0.0226176 |
| 258219 | ENSMUSG00000043827 | Olfr94 | olfactory receptor 94 | missense_variant | 6 | chr17 | 37.19671 | 37.19801 | 3.909441 | 0.0226176 |
| 258263 | ENSMUSG00000095286 | Olfr117 | olfactory receptor 117 | synonymous_variant | 5 | chr17 | 37.65938 | 37.66033 | 1.893991 | 1.0000000 |
| 258263 | ENSMUSG00000095286 | Olfr117 | olfactory receptor 117 | missense_variant | 1 | chr17 | 37.65938 | 37.66033 | 1.893991 | 1.0000000 |
| 258284 | ENSMUSG00000062629 | Olfr114 | olfactory receptor 114 | missense_variant | 4 | chr17 | 37.58938 | 37.59038 | 3.321474 | 0.0117388 |
| 258285 | ENSMUSG00000083947 | Olfr122 | olfactory receptor 122 | missense_variant | 7 | chr17 | 37.76861 | 37.77375 | 3.071249 | 0.0039809 |
| 258285 | ENSMUSG00000083947 | Olfr122 | olfactory receptor 122 | intron_variant | 3 | chr17 | 37.76861 | 37.77375 | 3.071249 | 0.0039809 |
| 258285 | ENSMUSG00000083947 | Olfr122 | olfactory receptor 122 | downstream_gene_variant | 12 | chr17 | 37.76861 | 37.77375 | 3.071249 | 0.0039809 |
| 258285 | ENSMUSG00000083947 | Olfr122 | olfactory receptor 122 | 5_prime_UTR_variant | 1 | chr17 | 37.76861 | 37.77375 | 3.071249 | 0.0039809 |
| 258285 | ENSMUSG00000083947 | Olfr122 | olfactory receptor 122 | synonymous_variant | 9 | chr17 | 37.76861 | 37.77375 | 3.071249 | 0.0039809 |
| 258285 | ENSMUSG00000083947 | Olfr122 | olfactory receptor 122 | upstream_gene_variant | 4 | chr17 | 37.76861 | 37.77375 | 3.071249 | 0.0039809 |
| 258287 | ENSMUSG00000050613 | Olfr125 | olfactory receptor 125 | 3_prime_UTR_variant | 2 | chr17 | 37.83491 | 37.83603 | 1.664455 | 1.0000000 |
| 258287 | ENSMUSG00000050613 | Olfr125 | olfactory receptor 125 | missense_variant | 5 | chr17 | 37.83491 | 37.83603 | 1.664455 | 1.0000000 |
| 258287 | ENSMUSG00000050613 | Olfr125 | olfactory receptor 125 | synonymous_variant | 1 | chr17 | 37.83491 | 37.83603 | 1.664455 | 1.0000000 |
| 258324 | ENSMUSG00000081724 | Olfr129 | olfactory receptor 129 | downstream_gene_variant | 2 | chr17 | 38.05086 | 38.06008 | 2.432632 | 0.0020832 |
| 258325 | ENSMUSG00000090894 | Olfr110 | olfactory receptor 110 | missense_variant | 4 | chr17 | 37.49247 | 37.50021 | 3.143089 | 1.0000000 |
| 258329 | ENSMUSG00000057801 | Olfr135 | olfactory receptor 135 | missense_variant | 2 | chr17 | 38.20817 | 38.20925 | NA | NA |
| 258374 | ENSMUSG00000058114 | Olfr127 | olfactory receptor 127 | synonymous_variant | 1 | chr17 | 37.90352 | 37.90462 | NA | NA |
| 258374 | ENSMUSG00000058114 | Olfr127 | olfactory receptor 127 | missense_variant | 2 | chr17 | 37.90352 | 37.90462 | NA | NA |
| 258374 | ENSMUSG00000058114 | Olfr127 | olfactory receptor 127 | 3_prime_UTR_variant | 2 | chr17 | 37.90352 | 37.90462 | NA | NA |
| 258374 | ENSMUSG00000058114 | Olfr127 | olfactory receptor 127 | 5_prime_UTR_variant | 1 | chr17 | 37.90352 | 37.90462 | NA | NA |
| 258448 | ENSMUSG00000096477 | Olfr92 | olfactory receptor 92 | missense_variant | 5 | chr17 | 37.11104 | 37.11198 | 2.542718 | 1.0000000 |
| 258448 | ENSMUSG00000096477 | Olfr92 | olfactory receptor 92 | synonymous_variant | 11 | chr17 | 37.11104 | 37.11198 | 2.542718 | 1.0000000 |
| 258457 | ENSMUSG00000059687 | Olfr108 | olfactory receptor 108 | missense_variant | 7 | chr17 | 37.44548 | 37.44652 | 3.268476 | 0.2432374 |
| 258457 | ENSMUSG00000059687 | Olfr108 | olfactory receptor 108 | synonymous_variant | 11 | chr17 | 37.44548 | 37.44652 | 3.268476 | 0.2432374 |
| 258469 | ENSMUSG00000056600 | Olfr90 | olfactory receptor 90 | missense_variant | 7 | chr17 | 37.08519 | 37.08624 | 2.037964 | 1.0000000 |
| 258469 | ENSMUSG00000056600 | Olfr90 | olfactory receptor 90 | synonymous_variant | 10 | chr17 | 37.08519 | 37.08624 | 2.037964 | 1.0000000 |
| 258470 | ENSMUSG00000095377 | Olfr91 | olfactory receptor 91 | synonymous_variant | 13 | chr17 | 37.09293 | 37.09387 | 3.561262 | 0.0035293 |
| 258470 | ENSMUSG00000095377 | Olfr91 | olfactory receptor 91 | missense_variant | 6 | chr17 | 37.09293 | 37.09387 | 3.561262 | 0.0035293 |
| 258481 | ENSMUSG00000054940 | Olfr137 | olfactory receptor 137 | missense_variant | 2 | chr17 | 38.30452 | 38.30546 | 3.051663 | 0.0269258 |
| 258503 | ENSMUSG00000063660 | Olfr98 | olfactory receptor 98 | missense_variant | 1 | chr17 | 37.26271 | 37.26375 | 3.251160 | 1.0000000 |
| 258503 | ENSMUSG00000063660 | Olfr98 | olfactory receptor 98 | 5_prime_UTR_variant | 1 | chr17 | 37.26271 | 37.26375 | 3.251160 | 1.0000000 |
| 258504 | ENSMUSG00000063188 | Olfr107 | olfactory receptor 107 | synonymous_variant | 2 | chr17 | 37.40548 | 37.40651 | 2.247838 | 0.0001445 |
| 258504 | ENSMUSG00000063188 | Olfr107 | olfactory receptor 107 | missense_variant | 3 | chr17 | 37.40548 | 37.40651 | 2.247838 | 0.0001445 |
| 258505 | ENSMUSG00000058802 | Olfr97 | olfactory receptor 97 | synonymous_variant | 3 | chr17 | 37.23144 | 37.23237 | NA | NA |
| 258505 | ENSMUSG00000058802 | Olfr97 | olfactory receptor 97 | missense_variant | 1 | chr17 | 37.23144 | 37.23237 | NA | NA |
| 258506 | ENSMUSG00000049561 | Olfr95 | olfactory receptor 95 | synonymous_variant | 1 | chr17 | 37.20795 | 37.21308 | 3.440704 | 0.0000022 |
| 258506 | ENSMUSG00000049561 | Olfr95 | olfactory receptor 95 | downstream_gene_variant | 6 | chr17 | 37.20795 | 37.21308 | 3.440704 | 0.0000022 |
| 258507 | ENSMUSG00000064121 | Olfr96 | olfactory receptor 96 | 3_prime_UTR_variant | 1 | chr17 | 37.22509 | 37.22614 | 4.220274 | 0.0010276 |
| 258507 | ENSMUSG00000064121 | Olfr96 | olfactory receptor 96 | synonymous_variant | 4 | chr17 | 37.22509 | 37.22614 | 4.220274 | 0.0010276 |
| 258507 | ENSMUSG00000064121 | Olfr96 | olfactory receptor 96 | missense_variant | 2 | chr17 | 37.22509 | 37.22614 | 4.220274 | 0.0010276 |
| 258508 | ENSMUSG00000061972 | Olfr99 | olfactory receptor 99 | synonymous_variant | 5 | chr17 | 37.27950 | 37.28042 | 3.458349 | 1.0000000 |
| 258508 | ENSMUSG00000061972 | Olfr99 | olfactory receptor 99 | missense_variant | 1 | chr17 | 37.27950 | 37.28042 | 3.458349 | 1.0000000 |
| 258622 | ENSMUSG00000060017 | Olfr121 | olfactory receptor 121 | intron_variant | 4 | chr17 | 37.74885 | 37.75317 | 1.877392 | 1.0000000 |
| 258622 | ENSMUSG00000060017 | Olfr121 | olfactory receptor 121 | missense_variant | 2 | chr17 | 37.74885 | 37.75317 | 1.877392 | 1.0000000 |
| 258622 | ENSMUSG00000060017 | Olfr121 | olfactory receptor 121 | synonymous_variant | 4 | chr17 | 37.74885 | 37.75317 | 1.877392 | 1.0000000 |
| 258623 | ENSMUSG00000045202 | Olfr123 | olfactory receptor 123 | missense_variant | 1 | chr17 | 37.79545 | 37.79637 | 2.417649 | 0.0028118 |
| 258623 | ENSMUSG00000045202 | Olfr123 | olfactory receptor 123 | synonymous_variant | 3 | chr17 | 37.79545 | 37.79637 | 2.417649 | 0.0028118 |
| 258624 | ENSMUSG00000063994 | Olfr120 | olfactory receptor 120 | missense_variant | 2 | chr17 | 37.72600 | 37.72699 | 2.992818 | 1.0000000 |
| 258624 | ENSMUSG00000063994 | Olfr120 | olfactory receptor 120 | synonymous_variant | 12 | chr17 | 37.72600 | 37.72699 | 2.992818 | 1.0000000 |
| 258625 | ENSMUSG00000061336 | Olfr116 | olfactory receptor 116 | missense_variant | 1 | chr17 | 37.62367 | 37.62463 | 4.236144 | 0.0077990 |
| 258625 | ENSMUSG00000061336 | Olfr116 | olfactory receptor 116 | synonymous_variant | 1 | chr17 | 37.62367 | 37.62463 | 4.236144 | 0.0077990 |
| 258803 | ENSMUSG00000096840 | Olfr136 | olfactory receptor 136 | missense_variant | 1 | chr17 | 38.33516 | 38.33610 | 2.189049 | 1.0000000 |
| 258828 | ENSMUSG00000063240 | Olfr133 | olfactory receptor 133 | downstream_gene_variant | 2 | chr17 | 38.14850 | 38.14959 | NA | NA |
| 258828 | ENSMUSG00000063240 | Olfr133 | olfactory receptor 133 | synonymous_variant | 3 | chr17 | 38.14850 | 38.14959 | NA | NA |
| 258830 | ENSMUSG00000049618 | Olfr103 | olfactory receptor 103 | synonymous_variant | 1 | chr17 | 37.33629 | 37.33723 | 5.466719 | 0.0000474 |
| 258831 | ENSMUSG00000092077 | Olfr101 | olfactory receptor 101 | synonymous_variant | 4 | chr17 | 37.29945 | 37.30048 | 3.006910 | 0.5978198 |
| 258831 | ENSMUSG00000092077 | Olfr101 | olfactory receptor 101 | 3_prime_UTR_variant | 1 | chr17 | 37.29945 | 37.30048 | 3.006910 | 0.5978198 |
| 258831 | ENSMUSG00000092077 | Olfr101 | olfactory receptor 101 | missense_variant | 2 | chr17 | 37.29945 | 37.30048 | 3.006910 | 0.5978198 |
| 258832 | ENSMUSG00000029184 | Olfr109 | olfactory receptor 109 | synonymous_variant | 4 | chr17 | 37.46621 | 37.46715 | 3.325981 | 0.0089381 |
| 258867 | ENSMUSG00000043312 | Olfr131 | olfactory receptor 131 | synonymous_variant | 1 | chr17 | 38.08197 | 38.08300 | 3.120813 | 0.0038465 |
| 259064 | ENSMUSG00000044985 | Olfr124 | olfactory receptor 124 | 3_prime_UTR_variant | 1 | chr17 | 37.80507 | 37.80619 | 2.652033 | 0.0010678 |
| 259064 | ENSMUSG00000044985 | Olfr124 | olfactory receptor 124 | synonymous_variant | 5 | chr17 | 37.80507 | 37.80619 | 2.652033 | 0.0010678 |
| 259064 | ENSMUSG00000044985 | Olfr124 | olfactory receptor 124 | missense_variant | 1 | chr17 | 37.80507 | 37.80619 | 2.652033 | 0.0010678 |
| 268949 | ENSMUSG00000073408 | Mucl3 | mucin like 3 | synonymous_variant | 11 | chr17 | 35.63575 | 35.64370 | 4.031655 | 0.0003758 |
| 268949 | ENSMUSG00000073408 | Mucl3 | mucin like 3 | missense_variant | 8 | chr17 | 35.63575 | 35.64370 | 4.031655 | 0.0003758 |
| 268949 | ENSMUSG00000073408 | Mucl3 | mucin like 3 | 3_prime_UTR_variant | 14 | chr17 | 35.63575 | 35.64370 | 4.031655 | 0.0003758 |
| 333715 | ENSMUSG00000023083 | H2-M10.2 | histocompatibility 2, M region locus 10.2 | missense_variant | 3 | chr17 | 36.28423 | 36.28649 | 3.749664 | 0.0907137 |
| 333715 | ENSMUSG00000023083 | H2-M10.2 | histocompatibility 2, M region locus 10.2 | splice_region_variant | 1 | chr17 | 36.28423 | 36.28649 | 3.749664 | 0.0907137 |
| 333715 | ENSMUSG00000023083 | H2-M10.2 | histocompatibility 2, M region locus 10.2 | synonymous_variant | 12 | chr17 | 36.28423 | 36.28649 | 3.749664 | 0.0907137 |
| 383243 | ENSMUSG00000059030 | Olfr128 | olfactory receptor 128 | 3_prime_UTR_variant | 1 | chr17 | 37.92351 | 37.92455 | NA | NA |
| 383243 | ENSMUSG00000059030 | Olfr128 | olfactory receptor 128 | synonymous_variant | 2 | chr17 | 37.92351 | 37.92455 | NA | NA |
| 383243 | ENSMUSG00000059030 | Olfr128 | olfactory receptor 128 | missense_variant | 3 | chr17 | 37.92351 | 37.92455 | NA | NA |
| 386454 | ENSMUSG00000036492 | Rnf39 | ring finger protein 39 | upstream_gene_variant | 2 | chr17 | 36.94292 | 36.94799 | 6.062696 | 1.0000000 |
| 386454 | ENSMUSG00000036492 | Rnf39 | ring finger protein 39 | synonymous_variant | 4 | chr17 | 36.94292 | 36.94799 | 6.062696 | 1.0000000 |
| 386454 | ENSMUSG00000036492 | Rnf39 | ring finger protein 39 | downstream_gene_variant | 2 | chr17 | 36.94292 | 36.94799 | 6.062696 | 1.0000000 |
| 386454 | ENSMUSG00000036492 | Rnf39 | ring finger protein 39 | downstream_gene_variant | 10 | chr17 | 36.94292 | 36.94799 | 6.062696 | 1.0000000 |
| 386463 | ENSMUSG00000039518 | Cdsn | corneodesmosin | 5_prime_UTR_variant | 1 | chr17 | 35.55213 | 35.55718 | 4.143791 | 0.0027699 |
| 386463 | ENSMUSG00000039518 | Cdsn | corneodesmosin | missense_variant | 8 | chr17 | 35.55213 | 35.55718 | 4.143791 | 0.0027699 |
| 386463 | ENSMUSG00000039518 | Cdsn | corneodesmosin | 3_prime_UTR_variant | 18 | chr17 | 35.55213 | 35.55718 | 4.143791 | 0.0027699 |
| 386463 | ENSMUSG00000039518 | Cdsn | corneodesmosin | synonymous_variant | 11 | chr17 | 35.55213 | 35.55718 | 4.143791 | 0.0027699 |
| 399549 | ENSMUSG00000037130 | H2-M10.6 | histocompatibility 2, M region locus 10.6 | 3_prime_UTR_variant | 9 | chr17 | 36.81217 | 36.81556 | 3.883213 | 0.0006979 |
| 399549 | ENSMUSG00000037130 | H2-M10.6 | histocompatibility 2, M region locus 10.6 | synonymous_variant | 5 | chr17 | 36.81217 | 36.81556 | 3.883213 | 0.0006979 |
| 399549 | ENSMUSG00000037130 | H2-M10.6 | histocompatibility 2, M region locus 10.6 | missense_variant | 3 | chr17 | 36.81217 | 36.81556 | 3.883213 | 0.0006979 |
| 404308 | ENSMUSG00000080990 | Olfr118 | olfactory receptor 118 | synonymous_variant | 5 | chr17 | 37.67202 | 37.67299 | NA | NA |
| 404308 | ENSMUSG00000080990 | Olfr118 | olfactory receptor 118 | missense_variant | 8 | chr17 | 37.67202 | 37.67299 | NA | NA |
| 433102 | ENSMUSG00000090509 | Sfta2 | surfactant associated 2 | downstream_gene_variant | 2 | chr17 | 35.60155 | 35.65057 | 7.188960 | 0.0000000 |
| 433102 | ENSMUSG00000090509 | Sfta2 | surfactant associated 2 | missense_variant | 7 | chr17 | 35.60155 | 35.65057 | 7.188960 | 0.0000000 |
| 433102 | ENSMUSG00000090509 | Sfta2 | surfactant associated 2 | intron_variant | 14 | chr17 | 35.60155 | 35.65057 | 7.188960 | 0.0000000 |
| 433102 | ENSMUSG00000090509 | Sfta2 | surfactant associated 2 | intron_variant | 33 | chr17 | 35.60155 | 35.65057 | 7.188960 | 0.0000000 |
| 433102 | ENSMUSG00000090509 | Sfta2 | surfactant associated 2 | synonymous_variant | 6 | chr17 | 35.60155 | 35.65057 | 7.188960 | 0.0000000 |
| 433102 | ENSMUSG00000090509 | Sfta2 | surfactant associated 2 | non_coding_transcript_variant | 33 | chr17 | 35.60155 | 35.65057 | 7.188960 | 0.0000000 |
| 433102 | ENSMUSG00000090509 | Sfta2 | surfactant associated 2 | 3_prime_UTR_variant | 11 | chr17 | 35.60155 | 35.65057 | 7.188960 | 0.0000000 |
| 433102 | ENSMUSG00000090509 | Sfta2 | surfactant associated 2 | 5_prime_UTR_variant | 11 | chr17 | 35.60155 | 35.65057 | 7.188960 | 0.0000000 |
| 433102 | ENSMUSG00000090509 | Sfta2 | surfactant associated 2 | non_coding_transcript_variant | 34 | chr17 | 35.60155 | 35.65057 | 7.188960 | 0.0000000 |
| 433102 | ENSMUSG00000090509 | Sfta2 | surfactant associated 2 | upstream_gene_variant | 3 | chr17 | 35.60155 | 35.65057 | 7.188960 | 0.0000000 |
| 433102 | ENSMUSG00000090509 | Sfta2 | surfactant associated 2 | non_coding_transcript_exon_variant | 24 | chr17 | 35.60155 | 35.65057 | 7.188960 | 0.0000000 |
| 433102 | ENSMUSG00000090509 | Sfta2 | surfactant associated 2 | intron_variant | 43 | chr17 | 35.60155 | 35.65057 | 7.188960 | 0.0000000 |
| 433102 | ENSMUSG00000090509 | Sfta2 | surfactant associated 2 | non_coding_transcript_variant | 43 | chr17 | 35.60155 | 35.65057 | 7.188960 | 0.0000000 |
| 433107 | ENSMUSG00000092043 | Esp6 | exocrine gland secreted peptide 6 | 3_prime_UTR_variant | 2 | chr17 | 40.56151 | 40.56563 | 2.703710 | 1.0000000 |
| 435528 | ENSMUSG00000091043 | Glyatl3 | glycine-N-acyltransferase-like 3 | missense_variant | 2 | chr17 | 40.90462 | 40.91435 | 2.146592 | 1.0000000 |
| 435528 | ENSMUSG00000091043 | Glyatl3 | glycine-N-acyltransferase-like 3 | synonymous_variant | 4 | chr17 | 40.90462 | 40.91435 | 2.146592 | 1.0000000 |
| 435528 | ENSMUSG00000091043 | Glyatl3 | glycine-N-acyltransferase-like 3 | downstream_gene_variant | 2 | chr17 | 40.90462 | 40.91435 | 2.146592 | 1.0000000 |
| 52040 | ENSMUSG00000039220 | Ppp1r10 | protein phosphatase 1, regulatory subunit 10 | non_coding_transcript_exon_variant | 4 | chr17 | 35.91657 | 35.93228 | 6.053452 | 1.0000000 |
| 52040 | ENSMUSG00000039220 | Ppp1r10 | protein phosphatase 1, regulatory subunit 10 | downstream_gene_variant | 11 | chr17 | 35.91657 | 35.93228 | 6.053452 | 1.0000000 |
| 52040 | ENSMUSG00000039220 | Ppp1r10 | protein phosphatase 1, regulatory subunit 10 | upstream_gene_variant | 1 | chr17 | 35.91657 | 35.93228 | 6.053452 | 1.0000000 |
| 52040 | ENSMUSG00000039220 | Ppp1r10 | protein phosphatase 1, regulatory subunit 10 | synonymous_variant | 7 | chr17 | 35.91657 | 35.93228 | 6.053452 | 1.0000000 |
| 52040 | ENSMUSG00000039220 | Ppp1r10 | protein phosphatase 1, regulatory subunit 10 | non_coding_transcript_variant | 4 | chr17 | 35.91657 | 35.93228 | 6.053452 | 1.0000000 |
| 52040 | ENSMUSG00000039220 | Ppp1r10 | protein phosphatase 1, regulatory subunit 10 | 3_prime_UTR_variant | 2 | chr17 | 35.91657 | 35.93228 | 6.053452 | 1.0000000 |
| 52040 | ENSMUSG00000039220 | Ppp1r10 | protein phosphatase 1, regulatory subunit 10 | 5_prime_UTR_variant | 2 | chr17 | 35.91657 | 35.93228 | 6.053452 | 1.0000000 |
| 52040 | ENSMUSG00000039220 | Ppp1r10 | protein phosphatase 1, regulatory subunit 10 | upstream_gene_variant | 8 | chr17 | 35.91657 | 35.93228 | 6.053452 | 1.0000000 |
| 53817 | ENSMUSG00000019432 | Ddx39b | DEAD box helicase 39b | upstream_gene_variant | 7 | chr17 | 35.24175 | 35.25371 | 8.062161 | 0.0118617 |
| 53817 | ENSMUSG00000019432 | Ddx39b | DEAD box helicase 39b | non_coding_transcript_exon_variant | 11 | chr17 | 35.24175 | 35.25371 | 8.062161 | 0.0118617 |
| 53817 | ENSMUSG00000019432 | Ddx39b | DEAD box helicase 39b | downstream_gene_variant | 11 | chr17 | 35.24175 | 35.25371 | 8.062161 | 0.0118617 |
| 53817 | ENSMUSG00000019432 | Ddx39b | DEAD box helicase 39b | intron_variant | 3 | chr17 | 35.24175 | 35.25371 | 8.062161 | 0.0118617 |
| 53817 | ENSMUSG00000019432 | Ddx39b | DEAD box helicase 39b | 5_prime_UTR_variant | 14 | chr17 | 35.24175 | 35.25371 | 8.062161 | 0.0118617 |
| 53817 | ENSMUSG00000019432 | Ddx39b | DEAD box helicase 39b | splice_region_variant | 1 | chr17 | 35.24175 | 35.25371 | 8.062161 | 0.0118617 |
| 53817 | ENSMUSG00000019432 | Ddx39b | DEAD box helicase 39b | downstream_gene_variant | 3 | chr17 | 35.24175 | 35.25371 | 8.062161 | 0.0118617 |
| 53817 | ENSMUSG00000019432 | Ddx39b | DEAD box helicase 39b | non_coding_transcript_variant | 3 | chr17 | 35.24175 | 35.25371 | 8.062161 | 0.0118617 |
| 53817 | ENSMUSG00000019432 | Ddx39b | DEAD box helicase 39b | synonymous_variant | 3 | chr17 | 35.24175 | 35.25371 | 8.062161 | 0.0118617 |
| 53817 | ENSMUSG00000019432 | Ddx39b | DEAD box helicase 39b | intron_variant | 13 | chr17 | 35.24175 | 35.25371 | 8.062161 | 0.0118617 |
| 53817 | ENSMUSG00000019432 | Ddx39b | DEAD box helicase 39b | non_coding_transcript_variant | 16 | chr17 | 35.24175 | 35.25371 | 8.062161 | 0.0118617 |
| 53817 | ENSMUSG00000019432 | Ddx39b | DEAD box helicase 39b | 3_prime_UTR_variant | 6 | chr17 | 35.24175 | 35.25371 | 8.062161 | 0.0118617 |
| 53817 | ENSMUSG00000019432 | Ddx39b | DEAD box helicase 39b | upstream_gene_variant | 59 | chr17 | 35.24175 | 35.25371 | 8.062161 | 0.0118617 |
| 54393 | ENSMUSG00000024462 | Gabbr1 | gamma-aminobutyric acid (GABA) B receptor, 1 | 3_prime_UTR_variant | 44 | chr17 | 37.04597 | 37.07507 | 6.014503 | 0.0000068 |
| 54393 | ENSMUSG00000024462 | Gabbr1 | gamma-aminobutyric acid (GABA) B receptor, 1 | non_coding_transcript_exon_variant | 7 | chr17 | 37.04597 | 37.07507 | 6.014503 | 0.0000068 |
| 54393 | ENSMUSG00000024462 | Gabbr1 | gamma-aminobutyric acid (GABA) B receptor, 1 | missense_variant | 2 | chr17 | 37.04597 | 37.07507 | 6.014503 | 0.0000068 |
| 54393 | ENSMUSG00000024462 | Gabbr1 | gamma-aminobutyric acid (GABA) B receptor, 1 | downstream_gene_variant | 45 | chr17 | 37.04597 | 37.07507 | 6.014503 | 0.0000068 |
| 54393 | ENSMUSG00000024462 | Gabbr1 | gamma-aminobutyric acid (GABA) B receptor, 1 | synonymous_variant | 8 | chr17 | 37.04597 | 37.07507 | 6.014503 | 0.0000068 |
| 54393 | ENSMUSG00000024462 | Gabbr1 | gamma-aminobutyric acid (GABA) B receptor, 1 | upstream_gene_variant | 12 | chr17 | 37.04597 | 37.07507 | 6.014503 | 0.0000068 |
| 54393 | ENSMUSG00000024462 | Gabbr1 | gamma-aminobutyric acid (GABA) B receptor, 1 | 5_prime_UTR_variant | 4 | chr17 | 37.04597 | 37.07507 | 6.014503 | 0.0000068 |
| 54393 | ENSMUSG00000024462 | Gabbr1 | gamma-aminobutyric acid (GABA) B receptor, 1 | NMD_transcript_variant | 48 | chr17 | 37.04597 | 37.07507 | 6.014503 | 0.0000068 |
| 54393 | ENSMUSG00000024462 | Gabbr1 | gamma-aminobutyric acid (GABA) B receptor, 1 | non_coding_transcript_variant | 17 | chr17 | 37.04597 | 37.07507 | 6.014503 | 0.0000068 |
| 54393 | ENSMUSG00000024462 | Gabbr1 | gamma-aminobutyric acid (GABA) B receptor, 1 | intron_variant | 13 | chr17 | 37.04597 | 37.07507 | 6.014503 | 0.0000068 |
| 545205 | ENSMUSG00000090675 | Olfr111 | olfactory receptor 111 | synonymous_variant | 2 | chr17 | 37.52996 | 37.53100 | 4.197750 | 1.0000000 |
| 547347 | ENSMUSG00000073407 | Gm6034 | predicted gene 6034 | 3_prime_UTR_variant | 1 | chr17 | 36.04296 | 36.05864 | 6.283675 | 0.9290392 |
| 547347 | ENSMUSG00000073407 | Gm6034 | predicted gene 6034 | upstream_gene_variant | 30 | chr17 | 36.04296 | 36.05864 | 6.283675 | 0.9290392 |
| 547347 | ENSMUSG00000073407 | Gm6034 | predicted gene 6034 | missense_variant | 8 | chr17 | 36.04296 | 36.05864 | 6.283675 | 0.9290392 |
| 547347 | ENSMUSG00000073407 | Gm6034 | predicted gene 6034 | intron_variant | 2 | chr17 | 36.04296 | 36.05864 | 6.283675 | 0.9290392 |
| 547347 | ENSMUSG00000073407 | Gm6034 | predicted gene 6034 | synonymous_variant | 2 | chr17 | 36.04296 | 36.05864 | 6.283675 | 0.9290392 |
| 547347 | ENSMUSG00000073407 | Gm6034 | predicted gene 6034 | 3_prime_UTR_variant | 1 | chr17 | 36.04296 | 36.05864 | 6.283675 | 0.9290392 |
| 547347 | ENSMUSG00000073407 | Gm6034 | predicted gene 6034 | upstream_gene_variant | 11 | chr17 | 36.04296 | 36.05864 | 6.283675 | 0.9290392 |
| 547347 | ENSMUSG00000073407 | Gm6034 | predicted gene 6034 | missense_variant | 5 | chr17 | 36.04296 | 36.05864 | 6.283675 | 0.9290392 |
| 547347 | ENSMUSG00000073407 | Gm6034 | predicted gene 6034 | synonymous_variant | 1 | chr17 | 36.04296 | 36.05864 | 6.283675 | 0.9290392 |
| 547347 | ENSMUSG00000073407 | Gm6034 | predicted gene 6034 | 5_prime_UTR_variant | 13 | chr17 | 36.04296 | 36.05864 | 6.283675 | 0.9290392 |
| 57390 | ENSMUSG00000024409 | Psors1c2 | psoriasis susceptibility 1 candidate 2 (human) | upstream_gene_variant | 30 | chr17 | 35.53320 | 35.53465 | 3.853168 | 0.0001213 |
| 57390 | ENSMUSG00000024409 | Psors1c2 | psoriasis susceptibility 1 candidate 2 (human) | 3_prime_UTR_variant | 2 | chr17 | 35.53320 | 35.53465 | 3.853168 | 0.0001213 |
| 619517 | ENSMUSG00000073396 | Esp1 | exocrine gland secreted peptide 1 | missense_variant | 1 | chr17 | 40.72712 | 40.73178 | 2.508848 | 1.0000000 |
| 619517 | ENSMUSG00000073396 | Esp1 | exocrine gland secreted peptide 1 | 3_prime_UTR_variant | 2 | chr17 | 40.72712 | 40.73178 | 2.508848 | 1.0000000 |
| 630294 | ENSMUSG00000092243 | Gm7030 | predicted gene 7030 | missense_variant | 1 | chr17 | 36.10972 | 36.12942 | 2.673565 | 1.0000000 |
| 630294 | ENSMUSG00000092243 | Gm7030 | predicted gene 7030 | downstream_gene_variant | 1 | chr17 | 36.10972 | 36.12942 | 2.673565 | 1.0000000 |
| 630294 | ENSMUSG00000092243 | Gm7030 | predicted gene 7030 | intron_variant | 1 | chr17 | 36.10972 | 36.12942 | 2.673565 | 1.0000000 |
| 630294 | ENSMUSG00000092243 | Gm7030 | predicted gene 7030 | synonymous_variant | 2 | chr17 | 36.10972 | 36.12942 | 2.673565 | 1.0000000 |
| 630294 | ENSMUSG00000092243 | Gm7030 | predicted gene 7030 | 3_prime_UTR_variant | 1 | chr17 | 36.10972 | 36.12942 | 2.673565 | 1.0000000 |
| 630294 | ENSMUSG00000092243 | Gm7030 | predicted gene 7030 | intron_variant | 3 | chr17 | 36.10972 | 36.12942 | 2.673565 | 1.0000000 |
| 66136 | ENSMUSG00000036315 | Znrd1 | zinc ribbon domain containing 1 | non_coding_transcript_exon_variant | 8 | chr17 | 36.95436 | 36.95856 | 5.273202 | 0.0000079 |
| 66136 | ENSMUSG00000036315 | Znrd1 | zinc ribbon domain containing 1 | downstream_gene_variant | 3 | chr17 | 36.95436 | 36.95856 | 5.273202 | 0.0000079 |
| 66136 | ENSMUSG00000036315 | Znrd1 | zinc ribbon domain containing 1 | non_coding_transcript_variant | 8 | chr17 | 36.95436 | 36.95856 | 5.273202 | 0.0000079 |
| 66136 | ENSMUSG00000036315 | Znrd1 | zinc ribbon domain containing 1 | synonymous_variant | 4 | chr17 | 36.95436 | 36.95856 | 5.273202 | 0.0000079 |
| 66136 | ENSMUSG00000036315 | Znrd1 | zinc ribbon domain containing 1 | downstream_gene_variant | 7 | chr17 | 36.95436 | 36.95856 | 5.273202 | 0.0000079 |
| 66136 | ENSMUSG00000036315 | Znrd1 | zinc ribbon domain containing 1 | 3_prime_UTR_variant | 7 | chr17 | 36.95436 | 36.95856 | 5.273202 | 0.0000079 |
| 66237 | ENSMUSG00000024403 | Atp6v1g2 | ATPase, H+ transporting, lysosomal V1 subunit G2 | missense_variant | 2 | chr17 | 35.23366 | 35.23877 | 4.610757 | 1.0000000 |
| 66237 | ENSMUSG00000024403 | Atp6v1g2 | ATPase, H+ transporting, lysosomal V1 subunit G2 | 5_prime_UTR_variant | 4 | chr17 | 35.23366 | 35.23877 | 4.610757 | 1.0000000 |
| 66237 | ENSMUSG00000024403 | Atp6v1g2 | ATPase, H+ transporting, lysosomal V1 subunit G2 | 5_prime_UTR_variant | 1 | chr17 | 35.23366 | 35.23877 | 4.610757 | 1.0000000 |
| 66237 | ENSMUSG00000024403 | Atp6v1g2 | ATPase, H+ transporting, lysosomal V1 subunit G2 | non_coding_transcript_variant | 2 | chr17 | 35.23366 | 35.23877 | 4.610757 | 1.0000000 |
| 66237 | ENSMUSG00000024403 | Atp6v1g2 | ATPase, H+ transporting, lysosomal V1 subunit G2 | upstream_gene_variant | 7 | chr17 | 35.23366 | 35.23877 | 4.610757 | 1.0000000 |
| 66237 | ENSMUSG00000024403 | Atp6v1g2 | ATPase, H+ transporting, lysosomal V1 subunit G2 | upstream_gene_variant | 2 | chr17 | 35.23366 | 35.23877 | 4.610757 | 1.0000000 |
| 66237 | ENSMUSG00000024403 | Atp6v1g2 | ATPase, H+ transporting, lysosomal V1 subunit G2 | intron_variant | 35 | chr17 | 35.23366 | 35.23877 | 4.610757 | 1.0000000 |
| 66237 | ENSMUSG00000024403 | Atp6v1g2 | ATPase, H+ transporting, lysosomal V1 subunit G2 | intron_variant | 2 | chr17 | 35.23366 | 35.23877 | 4.610757 | 1.0000000 |
| 66237 | ENSMUSG00000024403 | Atp6v1g2 | ATPase, H+ transporting, lysosomal V1 subunit G2 | downstream_gene_variant | 24 | chr17 | 35.23366 | 35.23877 | 4.610757 | 1.0000000 |
| 66237 | ENSMUSG00000024403 | Atp6v1g2 | ATPase, H+ transporting, lysosomal V1 subunit G2 | downstream_gene_variant | 14 | chr17 | 35.23366 | 35.23877 | 4.610757 | 1.0000000 |
| 66237 | ENSMUSG00000024403 | Atp6v1g2 | ATPase, H+ transporting, lysosomal V1 subunit G2 | synonymous_variant | 6 | chr17 | 35.23366 | 35.23877 | 4.610757 | 1.0000000 |
| 66237 | ENSMUSG00000024403 | Atp6v1g2 | ATPase, H+ transporting, lysosomal V1 subunit G2 | non_coding_transcript_variant | 66 | chr17 | 35.23366 | 35.23877 | 4.610757 | 1.0000000 |
| 66237 | ENSMUSG00000024403 | Atp6v1g2 | ATPase, H+ transporting, lysosomal V1 subunit G2 | non_coding_transcript_exon_variant | 64 | chr17 | 35.23366 | 35.23877 | 4.610757 | 1.0000000 |
| 66237 | ENSMUSG00000024403 | Atp6v1g2 | ATPase, H+ transporting, lysosomal V1 subunit G2 | 3_prime_UTR_variant | 24 | chr17 | 35.23366 | 35.23877 | 4.610757 | 1.0000000 |
| 667977 | ENSMUSG00000073402 | Gm8909 | predicted gene 8909 | upstream_gene_variant | 6 | chr17 | 36.16444 | 36.16854 | 3.363805 | 1.0000000 |
| 667977 | ENSMUSG00000073402 | Gm8909 | predicted gene 8909 | non_coding_transcript_exon_variant | 8 | chr17 | 36.16444 | 36.16854 | 3.363805 | 1.0000000 |
| 667977 | ENSMUSG00000073402 | Gm8909 | predicted gene 8909 | synonymous_variant | 1 | chr17 | 36.16444 | 36.16854 | 3.363805 | 1.0000000 |
| 667977 | ENSMUSG00000073402 | Gm8909 | predicted gene 8909 | downstream_gene_variant | 13 | chr17 | 36.16444 | 36.16854 | 3.363805 | 1.0000000 |
| 667977 | ENSMUSG00000073402 | Gm8909 | predicted gene 8909 | missense_variant | 13 | chr17 | 36.16444 | 36.16854 | 3.363805 | 1.0000000 |
| 667977 | ENSMUSG00000073402 | Gm8909 | predicted gene 8909 | non_coding_transcript_variant | 8 | chr17 | 36.16444 | 36.16854 | 3.363805 | 1.0000000 |
| 667977 | ENSMUSG00000073402 | Gm8909 | predicted gene 8909 | downstream_gene_variant | 4 | chr17 | 36.16444 | 36.16854 | 3.363805 | 1.0000000 |
| 668200 | ENSMUSG00000095104 | Esp15 | exocrine gland secreted peptide 15 | missense_variant | 7 | chr17 | 39.64095 | 39.64567 | NA | NA |
| 668200 | ENSMUSG00000095104 | Esp15 | exocrine gland secreted peptide 15 | 3_prime_UTR_variant | 10 | chr17 | 39.64095 | 39.64567 | NA | NA |
| 66973 | ENSMUSG00000024436 | Mrps18b | mitochondrial ribosomal protein S18B | downstream_gene_variant | 21 | chr17 | 35.91038 | 35.91639 | 6.854664 | 1.0000000 |
| 66973 | ENSMUSG00000024436 | Mrps18b | mitochondrial ribosomal protein S18B | missense_variant | 3 | chr17 | 35.91038 | 35.91639 | 6.854664 | 1.0000000 |
| 66973 | ENSMUSG00000024436 | Mrps18b | mitochondrial ribosomal protein S18B | upstream_gene_variant | 6 | chr17 | 35.91038 | 35.91639 | 6.854664 | 1.0000000 |
| 66973 | ENSMUSG00000024436 | Mrps18b | mitochondrial ribosomal protein S18B | non_coding_transcript_variant | 11 | chr17 | 35.91038 | 35.91639 | 6.854664 | 1.0000000 |
| 66973 | ENSMUSG00000024436 | Mrps18b | mitochondrial ribosomal protein S18B | upstream_gene_variant | 2 | chr17 | 35.91038 | 35.91639 | 6.854664 | 1.0000000 |
| 66973 | ENSMUSG00000024436 | Mrps18b | mitochondrial ribosomal protein S18B | downstream_gene_variant | 8 | chr17 | 35.91038 | 35.91639 | 6.854664 | 1.0000000 |
| 66973 | ENSMUSG00000024436 | Mrps18b | mitochondrial ribosomal protein S18B | intron_variant | 11 | chr17 | 35.91038 | 35.91639 | 6.854664 | 1.0000000 |
| 66973 | ENSMUSG00000024436 | Mrps18b | mitochondrial ribosomal protein S18B | 3_prime_UTR_variant | 3 | chr17 | 35.91038 | 35.91639 | 6.854664 | 1.0000000 |
| 66973 | ENSMUSG00000024436 | Mrps18b | mitochondrial ribosomal protein S18B | non_coding_transcript_exon_variant | 11 | chr17 | 35.91038 | 35.91639 | 6.854664 | 1.0000000 |
| 672682 | ENSMUSG00000090588 | Muc21 | mucin 21 | missense_variant | 27 | chr17 | 35.61792 | 35.62664 | 2.544993 | 0.0000016 |
| 672682 | ENSMUSG00000090588 | Muc21 | mucin 21 | 5_prime_UTR_variant | 3 | chr17 | 35.61792 | 35.62664 | 2.544993 | 0.0000016 |
| 672682 | ENSMUSG00000090588 | Muc21 | mucin 21 | intron_variant | 33 | chr17 | 35.61792 | 35.62664 | 2.544993 | 0.0000016 |
| 672682 | ENSMUSG00000090588 | Muc21 | mucin 21 | upstream_gene_variant | 7 | chr17 | 35.61792 | 35.62664 | 2.544993 | 0.0000016 |
| 672682 | ENSMUSG00000090588 | Muc21 | mucin 21 | downstream_gene_variant | 4 | chr17 | 35.61792 | 35.62664 | 2.544993 | 0.0000016 |
| 672682 | ENSMUSG00000090588 | Muc21 | mucin 21 | non_coding_transcript_exon_variant | 8 | chr17 | 35.61792 | 35.62664 | 2.544993 | 0.0000016 |
| 672682 | ENSMUSG00000090588 | Muc21 | mucin 21 | downstream_gene_variant | 1 | chr17 | 35.61792 | 35.62664 | 2.544993 | 0.0000016 |
| 672682 | ENSMUSG00000090588 | Muc21 | mucin 21 | upstream_gene_variant | 1 | chr17 | 35.61792 | 35.62664 | 2.544993 | 0.0000016 |
| 672682 | ENSMUSG00000090588 | Muc21 | mucin 21 | synonymous_variant | 12 | chr17 | 35.61792 | 35.62664 | 2.544993 | 0.0000016 |
| 672682 | ENSMUSG00000090588 | Muc21 | mucin 21 | 3_prime_UTR_variant | 1 | chr17 | 35.61792 | 35.62664 | 2.544993 | 0.0000016 |
| 672682 | ENSMUSG00000090588 | Muc21 | mucin 21 | non_coding_transcript_variant | 41 | chr17 | 35.61792 | 35.62664 | 2.544993 | 0.0000016 |
| 675325 | ENSMUSG00000038311 | 2410017I17Rik | RIKEN cDNA 2410017I17 gene | non_coding_transcript_variant | 13 | chr17 | 36.14502 | 36.16318 | NA | NA |
| 675325 | ENSMUSG00000038311 | 2410017I17Rik | RIKEN cDNA 2410017I17 gene | non_coding_transcript_exon_variant | 13 | chr17 | 36.14502 | 36.16318 | NA | NA |
| 675325 | ENSMUSG00000038311 | 2410017I17Rik | RIKEN cDNA 2410017I17 gene | non_coding_transcript_variant | 10 | chr17 | 36.14502 | 36.16318 | NA | NA |
| 675325 | ENSMUSG00000038311 | 2410017I17Rik | RIKEN cDNA 2410017I17 gene | upstream_gene_variant | 4 | chr17 | 36.14502 | 36.16318 | NA | NA |
| 675325 | ENSMUSG00000038311 | 2410017I17Rik | RIKEN cDNA 2410017I17 gene | downstream_gene_variant | 14 | chr17 | 36.14502 | 36.16318 | NA | NA |
| 675325 | ENSMUSG00000038311 | 2410017I17Rik | RIKEN cDNA 2410017I17 gene | downstream_gene_variant | 10 | chr17 | 36.14502 | 36.16318 | NA | NA |
| 675325 | ENSMUSG00000038311 | 2410017I17Rik | RIKEN cDNA 2410017I17 gene | intron_variant | 10 | chr17 | 36.14502 | 36.16318 | NA | NA |
| 67676 | ENSMUSG00000024446 | Rpp21 | ribonuclease P 21 subunit | 5_prime_UTR_variant | 2 | chr17 | 36.25565 | 36.25807 | 4.562542 | 1.0000000 |
| 67676 | ENSMUSG00000024446 | Rpp21 | ribonuclease P 21 subunit | non_coding_transcript_exon_variant | 17 | chr17 | 36.25565 | 36.25807 | 4.562542 | 1.0000000 |
| 67676 | ENSMUSG00000024446 | Rpp21 | ribonuclease P 21 subunit | 3_prime_UTR_variant | 7 | chr17 | 36.25565 | 36.25807 | 4.562542 | 1.0000000 |
| 67676 | ENSMUSG00000024446 | Rpp21 | ribonuclease P 21 subunit | upstream_gene_variant | 34 | chr17 | 36.25565 | 36.25807 | 4.562542 | 1.0000000 |
| 67676 | ENSMUSG00000024446 | Rpp21 | ribonuclease P 21 subunit | NMD_transcript_variant | 18 | chr17 | 36.25565 | 36.25807 | 4.562542 | 1.0000000 |
| 67676 | ENSMUSG00000024446 | Rpp21 | ribonuclease P 21 subunit | non_coding_transcript_variant | 17 | chr17 | 36.25565 | 36.25807 | 4.562542 | 1.0000000 |
| 67676 | ENSMUSG00000024446 | Rpp21 | ribonuclease P 21 subunit | upstream_gene_variant | 9 | chr17 | 36.25565 | 36.25807 | 4.562542 | 1.0000000 |
| 67676 | ENSMUSG00000024446 | Rpp21 | ribonuclease P 21 subunit | missense_variant | 4 | chr17 | 36.25565 | 36.25807 | 4.562542 | 1.0000000 |
| 67676 | ENSMUSG00000024446 | Rpp21 | ribonuclease P 21 subunit | synonymous_variant | 6 | chr17 | 36.25565 | 36.25807 | 4.562542 | 1.0000000 |
| 67676 | ENSMUSG00000024446 | Rpp21 | ribonuclease P 21 subunit | intron_variant | 7 | chr17 | 36.25565 | 36.25807 | 4.562542 | 1.0000000 |
| 67676 | ENSMUSG00000024446 | Rpp21 | ribonuclease P 21 subunit | downstream_gene_variant | 5 | chr17 | 36.25565 | 36.25807 | 4.562542 | 1.0000000 |
| 67676 | ENSMUSG00000024446 | Rpp21 | ribonuclease P 21 subunit | stop_gained | 2 | chr17 | 36.25565 | 36.25807 | 4.562542 | 1.0000000 |
| 68915 | ENSMUSG00000038838 | Vars2 | valyl-tRNA synthetase 2, mitochondrial | non_coding_transcript_variant | 170 | chr17 | 35.65563 | 35.66759 | 5.152056 | 0.1022689 |
| 68915 | ENSMUSG00000038838 | Vars2 | valyl-tRNA synthetase 2, mitochondrial | missense_variant | 36 | chr17 | 35.65563 | 35.66759 | 5.152056 | 0.1022689 |
| 68915 | ENSMUSG00000038838 | Vars2 | valyl-tRNA synthetase 2, mitochondrial | synonymous_variant | 36 | chr17 | 35.65563 | 35.66759 | 5.152056 | 0.1022689 |
| 68915 | ENSMUSG00000038838 | Vars2 | valyl-tRNA synthetase 2, mitochondrial | intron_variant | 19 | chr17 | 35.65563 | 35.66759 | 5.152056 | 0.1022689 |
| 68915 | ENSMUSG00000038838 | Vars2 | valyl-tRNA synthetase 2, mitochondrial | 5_prime_UTR_variant | 9 | chr17 | 35.65563 | 35.66759 | 5.152056 | 0.1022689 |
| 68915 | ENSMUSG00000038838 | Vars2 | valyl-tRNA synthetase 2, mitochondrial | 3_prime_UTR_variant | 115 | chr17 | 35.65563 | 35.66759 | 5.152056 | 0.1022689 |
| 68915 | ENSMUSG00000038838 | Vars2 | valyl-tRNA synthetase 2, mitochondrial | non_coding_transcript_exon_variant | 162 | chr17 | 35.65563 | 35.66759 | 5.152056 | 0.1022689 |
| 68915 | ENSMUSG00000038838 | Vars2 | valyl-tRNA synthetase 2, mitochondrial | upstream_gene_variant | 33 | chr17 | 35.65563 | 35.66759 | 5.152056 | 0.1022689 |
| 68915 | ENSMUSG00000038838 | Vars2 | valyl-tRNA synthetase 2, mitochondrial | NMD_transcript_variant | 97 | chr17 | 35.65563 | 35.66759 | 5.152056 | 0.1022689 |
| 68915 | ENSMUSG00000038838 | Vars2 | valyl-tRNA synthetase 2, mitochondrial | splice_region_variant | 3 | chr17 | 35.65563 | 35.66759 | 5.152056 | 0.1022689 |
| 68915 | ENSMUSG00000038838 | Vars2 | valyl-tRNA synthetase 2, mitochondrial | upstream_gene_variant | 77 | chr17 | 35.65563 | 35.66759 | 5.152056 | 0.1022689 |
| 68915 | ENSMUSG00000038838 | Vars2 | valyl-tRNA synthetase 2, mitochondrial | downstream_gene_variant | 155 | chr17 | 35.65563 | 35.66759 | 5.152056 | 0.1022689 |
| 69097 | ENSMUSG00000050747 | Trim15 | tripartite motif-containing 15 | 5_prime_UTR_variant | 4 | chr17 | 36.86069 | 36.86721 | 3.543163 | 0.0002037 |
| 69097 | ENSMUSG00000050747 | Trim15 | tripartite motif-containing 15 | upstream_gene_variant | 8 | chr17 | 36.86069 | 36.86721 | 3.543163 | 0.0002037 |
| 69097 | ENSMUSG00000050747 | Trim15 | tripartite motif-containing 15 | synonymous_variant | 7 | chr17 | 36.86069 | 36.86721 | 3.543163 | 0.0002037 |
| 69097 | ENSMUSG00000050747 | Trim15 | tripartite motif-containing 15 | upstream_gene_variant | 4 | chr17 | 36.86069 | 36.86721 | 3.543163 | 0.0002037 |
| 69097 | ENSMUSG00000050747 | Trim15 | tripartite motif-containing 15 | downstream_gene_variant | 60 | chr17 | 36.86069 | 36.86721 | 3.543163 | 0.0002037 |
| 69097 | ENSMUSG00000050747 | Trim15 | tripartite motif-containing 15 | NMD_transcript_variant | 28 | chr17 | 36.86069 | 36.86721 | 3.543163 | 0.0002037 |
| 69097 | ENSMUSG00000050747 | Trim15 | tripartite motif-containing 15 | 3_prime_UTR_variant | 62 | chr17 | 36.86069 | 36.86721 | 3.543163 | 0.0002037 |
| 69097 | ENSMUSG00000050747 | Trim15 | tripartite motif-containing 15 | intron_variant | 10 | chr17 | 36.86069 | 36.86721 | 3.543163 | 0.0002037 |
| 69097 | ENSMUSG00000050747 | Trim15 | tripartite motif-containing 15 | downstream_gene_variant | 36 | chr17 | 36.86069 | 36.86721 | 3.543163 | 0.0002037 |
| 69192 | ENSMUSG00000024422 | Dhx16 | DEAH (Asp-Glu-Ala-His) box polypeptide 16 | downstream_gene_variant | 44 | chr17 | 35.87982 | 35.89267 | 5.942349 | 0.0004062 |
| 69192 | ENSMUSG00000024422 | Dhx16 | DEAH (Asp-Glu-Ala-His) box polypeptide 16 | splice_region_variant | 1 | chr17 | 35.87982 | 35.89267 | 5.942349 | 0.0004062 |
| 69192 | ENSMUSG00000024422 | Dhx16 | DEAH (Asp-Glu-Ala-His) box polypeptide 16 | 3_prime_UTR_variant | 11 | chr17 | 35.87982 | 35.89267 | 5.942349 | 0.0004062 |
| 69192 | ENSMUSG00000024422 | Dhx16 | DEAH (Asp-Glu-Ala-His) box polypeptide 16 | synonymous_variant | 18 | chr17 | 35.87982 | 35.89267 | 5.942349 | 0.0004062 |
| 69192 | ENSMUSG00000024422 | Dhx16 | DEAH (Asp-Glu-Ala-His) box polypeptide 16 | non_coding_transcript_variant | 27 | chr17 | 35.87982 | 35.89267 | 5.942349 | 0.0004062 |
| 69192 | ENSMUSG00000024422 | Dhx16 | DEAH (Asp-Glu-Ala-His) box polypeptide 16 | missense_variant | 5 | chr17 | 35.87982 | 35.89267 | 5.942349 | 0.0004062 |
| 69192 | ENSMUSG00000024422 | Dhx16 | DEAH (Asp-Glu-Ala-His) box polypeptide 16 | upstream_gene_variant | 32 | chr17 | 35.87982 | 35.89267 | 5.942349 | 0.0004062 |
| 69192 | ENSMUSG00000024422 | Dhx16 | DEAH (Asp-Glu-Ala-His) box polypeptide 16 | upstream_gene_variant | 24 | chr17 | 35.87982 | 35.89267 | 5.942349 | 0.0004062 |
| 69192 | ENSMUSG00000024422 | Dhx16 | DEAH (Asp-Glu-Ala-His) box polypeptide 16 | downstream_gene_variant | 17 | chr17 | 35.87982 | 35.89267 | 5.942349 | 0.0004062 |
| 69192 | ENSMUSG00000024422 | Dhx16 | DEAH (Asp-Glu-Ala-His) box polypeptide 16 | intron_variant | 23 | chr17 | 35.87982 | 35.89267 | 5.942349 | 0.0004062 |
| 69192 | ENSMUSG00000024422 | Dhx16 | DEAH (Asp-Glu-Ala-His) box polypeptide 16 | non_coding_transcript_exon_variant | 27 | chr17 | 35.87982 | 35.89267 | 5.942349 | 0.0004062 |
| 69192 | ENSMUSG00000024422 | Dhx16 | DEAH (Asp-Glu-Ala-His) box polypeptide 16 | NMD_transcript_variant | 52 | chr17 | 35.87982 | 35.89267 | 5.942349 | 0.0004062 |
| 69542 | ENSMUSG00000039269 | 2300002M23Rik | RIKEN cDNA 2300002M23 gene | 5_prime_UTR_variant | 1 | chr17 | 35.56745 | 35.56895 | 4.345803 | 0.0006172 |
| 69542 | ENSMUSG00000039269 | 2300002M23Rik | RIKEN cDNA 2300002M23 gene | synonymous_variant | 7 | chr17 | 35.56745 | 35.56895 | 4.345803 | 0.0006172 |
| 69542 | ENSMUSG00000039269 | 2300002M23Rik | RIKEN cDNA 2300002M23 gene | non_coding_transcript_variant | 14 | chr17 | 35.56745 | 35.56895 | 4.345803 | 0.0006172 |
| 69542 | ENSMUSG00000039269 | 2300002M23Rik | RIKEN cDNA 2300002M23 gene | 3_prime_UTR_variant | 2 | chr17 | 35.56745 | 35.56895 | 4.345803 | 0.0006172 |
| 69542 | ENSMUSG00000039269 | 2300002M23Rik | RIKEN cDNA 2300002M23 gene | missense_variant | 4 | chr17 | 35.56745 | 35.56895 | 4.345803 | 0.0006172 |
| 69542 | ENSMUSG00000039269 | 2300002M23Rik | RIKEN cDNA 2300002M23 gene | non_coding_transcript_exon_variant | 14 | chr17 | 35.56745 | 35.56895 | 4.345803 | 0.0006172 |
| 69662 | ENSMUSG00000050705 | 2310061I04Rik | RIKEN cDNA 2310061I04 gene | stop_gained | 3 | chr17 | 35.89268 | 35.89743 | 5.779212 | 0.0006910 |
| 69662 | ENSMUSG00000050705 | 2310061I04Rik | RIKEN cDNA 2310061I04 gene | splice_region_variant | 3 | chr17 | 35.89268 | 35.89743 | 5.779212 | 0.0006910 |
| 69662 | ENSMUSG00000050705 | 2310061I04Rik | RIKEN cDNA 2310061I04 gene | upstream_gene_variant | 40 | chr17 | 35.89268 | 35.89743 | 5.779212 | 0.0006910 |
| 69662 | ENSMUSG00000050705 | 2310061I04Rik | RIKEN cDNA 2310061I04 gene | 5_prime_UTR_variant | 33 | chr17 | 35.89268 | 35.89743 | 5.779212 | 0.0006910 |
| 69662 | ENSMUSG00000050705 | 2310061I04Rik | RIKEN cDNA 2310061I04 gene | intron_variant | 26 | chr17 | 35.89268 | 35.89743 | 5.779212 | 0.0006910 |
| 69662 | ENSMUSG00000050705 | 2310061I04Rik | RIKEN cDNA 2310061I04 gene | downstream_gene_variant | 34 | chr17 | 35.89268 | 35.89743 | 5.779212 | 0.0006910 |
| 69662 | ENSMUSG00000050705 | 2310061I04Rik | RIKEN cDNA 2310061I04 gene | downstream_gene_variant | 22 | chr17 | 35.89268 | 35.89743 | 5.779212 | 0.0006910 |
| 69662 | ENSMUSG00000050705 | 2310061I04Rik | RIKEN cDNA 2310061I04 gene | initiator_codon_variant | 4 | chr17 | 35.89268 | 35.89743 | 5.779212 | 0.0006910 |
| 69662 | ENSMUSG00000050705 | 2310061I04Rik | RIKEN cDNA 2310061I04 gene | upstream_gene_variant | 26 | chr17 | 35.89268 | 35.89743 | 5.779212 | 0.0006910 |
| 69662 | ENSMUSG00000050705 | 2310061I04Rik | RIKEN cDNA 2310061I04 gene | non_coding_transcript_variant | 37 | chr17 | 35.89268 | 35.89743 | 5.779212 | 0.0006910 |
| 69662 | ENSMUSG00000050705 | 2310061I04Rik | RIKEN cDNA 2310061I04 gene | non_coding_transcript_exon_variant | 31 | chr17 | 35.89268 | 35.89743 | 5.779212 | 0.0006910 |
| 69662 | ENSMUSG00000050705 | 2310061I04Rik | RIKEN cDNA 2310061I04 gene | missense_variant | 8 | chr17 | 35.89268 | 35.89743 | 5.779212 | 0.0006910 |
| 69662 | ENSMUSG00000050705 | 2310061I04Rik | RIKEN cDNA 2310061I04 gene | 3_prime_UTR_variant | 3 | chr17 | 35.89268 | 35.89743 | 5.779212 | 0.0006910 |
| 69662 | ENSMUSG00000050705 | 2310061I04Rik | RIKEN cDNA 2310061I04 gene | synonymous_variant | 8 | chr17 | 35.89268 | 35.89743 | 5.779212 | 0.0006910 |
| 71583 | ENSMUSG00000054951 | 9130008F23Rik | RIKEN cDNA 9130008F23 gene | 3_prime_UTR_variant | 19 | chr17 | 40.87548 | 40.88056 | 3.607309 | 1.0000000 |
| 71583 | ENSMUSG00000054951 | 9130008F23Rik | RIKEN cDNA 9130008F23 gene | missense_variant | 5 | chr17 | 40.87548 | 40.88056 | 3.607309 | 1.0000000 |
| 71583 | ENSMUSG00000054951 | 9130008F23Rik | RIKEN cDNA 9130008F23 gene | stop_gained | 2 | chr17 | 40.87548 | 40.88056 | 3.607309 | 1.0000000 |
| 71583 | ENSMUSG00000054951 | 9130008F23Rik | RIKEN cDNA 9130008F23 gene | synonymous_variant | 2 | chr17 | 40.87548 | 40.88056 | 3.607309 | 1.0000000 |
| 73242 | ENSMUSG00000024426 | Atat1 | alpha tubulin acetyltransferase 1 | intron_variant | 35 | chr17 | 35.89760 | 35.91007 | 5.636433 | 0.0065058 |
| 73242 | ENSMUSG00000024426 | Atat1 | alpha tubulin acetyltransferase 1 | downstream_gene_variant | 44 | chr17 | 35.89760 | 35.91007 | 5.636433 | 0.0065058 |
| 73242 | ENSMUSG00000024426 | Atat1 | alpha tubulin acetyltransferase 1 | non_coding_transcript_exon_variant | 41 | chr17 | 35.89760 | 35.91007 | 5.636433 | 0.0065058 |
| 73242 | ENSMUSG00000024426 | Atat1 | alpha tubulin acetyltransferase 1 | upstream_gene_variant | 8 | chr17 | 35.89760 | 35.91007 | 5.636433 | 0.0065058 |
| 73242 | ENSMUSG00000024426 | Atat1 | alpha tubulin acetyltransferase 1 | upstream_gene_variant | 33 | chr17 | 35.89760 | 35.91007 | 5.636433 | 0.0065058 |
| 73242 | ENSMUSG00000024426 | Atat1 | alpha tubulin acetyltransferase 1 | missense_variant | 9 | chr17 | 35.89760 | 35.91007 | 5.636433 | 0.0065058 |
| 73242 | ENSMUSG00000024426 | Atat1 | alpha tubulin acetyltransferase 1 | NMD_transcript_variant | 48 | chr17 | 35.89760 | 35.91007 | 5.636433 | 0.0065058 |
| 73242 | ENSMUSG00000024426 | Atat1 | alpha tubulin acetyltransferase 1 | downstream_gene_variant | 44 | chr17 | 35.89760 | 35.91007 | 5.636433 | 0.0065058 |
| 73242 | ENSMUSG00000024426 | Atat1 | alpha tubulin acetyltransferase 1 | 5_prime_UTR_variant | 7 | chr17 | 35.89760 | 35.91007 | 5.636433 | 0.0065058 |
| 73242 | ENSMUSG00000024426 | Atat1 | alpha tubulin acetyltransferase 1 | non_coding_transcript_variant | 45 | chr17 | 35.89760 | 35.91007 | 5.636433 | 0.0065058 |
| 73242 | ENSMUSG00000024426 | Atat1 | alpha tubulin acetyltransferase 1 | synonymous_variant | 10 | chr17 | 35.89760 | 35.91007 | 5.636433 | 0.0065058 |
| 73242 | ENSMUSG00000024426 | Atat1 | alpha tubulin acetyltransferase 1 | stop_gained | 4 | chr17 | 35.89760 | 35.91007 | 5.636433 | 0.0065058 |
| 73242 | ENSMUSG00000024426 | Atat1 | alpha tubulin acetyltransferase 1 | 3_prime_UTR_variant | 33 | chr17 | 35.89760 | 35.91007 | 5.636433 | 0.0065058 |
| 73286 | ENSMUSG00000092239 | 1700031A10Rik | RIKEN cDNA 1700031A10 gene | non_coding_transcript_exon_variant | 8 | chr17 | 36.92379 | 36.93343 | 3.295462 | 1.0000000 |
| 73286 | ENSMUSG00000092239 | 1700031A10Rik | RIKEN cDNA 1700031A10 gene | non_coding_transcript_variant | 8 | chr17 | 36.92379 | 36.93343 | 3.295462 | 1.0000000 |
| 74601 | ENSMUSG00000092171 | 4833427F10Rik | RIKEN cDNA 4833427F10 gene | non_coding_transcript_variant | 6 | chr17 | 35.77245 | 35.78069 | 3.930978 | 0.0031665 |
| 74601 | ENSMUSG00000092171 | 4833427F10Rik | RIKEN cDNA 4833427F10 gene | non_coding_transcript_exon_variant | 6 | chr17 | 35.77245 | 35.78069 | 3.930978 | 0.0031665 |
| 75210 | ENSMUSG00000038500 | Prr3 | proline-rich polypeptide 3 | non_coding_transcript_exon_variant | 4 | chr17 | 35.97254 | 35.98024 | 4.346149 | 1.0000000 |
| 75210 | ENSMUSG00000038500 | Prr3 | proline-rich polypeptide 3 | 5_prime_UTR_variant | 4 | chr17 | 35.97254 | 35.98024 | 4.346149 | 1.0000000 |
| 75210 | ENSMUSG00000038500 | Prr3 | proline-rich polypeptide 3 | splice_region_variant | 3 | chr17 | 35.97254 | 35.98024 | 4.346149 | 1.0000000 |
| 75210 | ENSMUSG00000038500 | Prr3 | proline-rich polypeptide 3 | intron_variant | 12 | chr17 | 35.97254 | 35.98024 | 4.346149 | 1.0000000 |
| 75210 | ENSMUSG00000038500 | Prr3 | proline-rich polypeptide 3 | non_coding_transcript_variant | 5 | chr17 | 35.97254 | 35.98024 | 4.346149 | 1.0000000 |
| 75210 | ENSMUSG00000038500 | Prr3 | proline-rich polypeptide 3 | missense_variant | 1 | chr17 | 35.97254 | 35.98024 | 4.346149 | 1.0000000 |
| 75210 | ENSMUSG00000038500 | Prr3 | proline-rich polypeptide 3 | synonymous_variant | 2 | chr17 | 35.97254 | 35.98024 | 4.346149 | 1.0000000 |
| 75210 | ENSMUSG00000038500 | Prr3 | proline-rich polypeptide 3 | upstream_gene_variant | 8 | chr17 | 35.97254 | 35.98024 | 4.346149 | 1.0000000 |
| 75210 | ENSMUSG00000038500 | Prr3 | proline-rich polypeptide 3 | downstream_gene_variant | 3 | chr17 | 35.97254 | 35.98024 | 4.346149 | 1.0000000 |
| 75210 | ENSMUSG00000038500 | Prr3 | proline-rich polypeptide 3 | 3_prime_UTR_variant | 12 | chr17 | 35.97254 | 35.98024 | 4.346149 | 1.0000000 |
| 75210 | ENSMUSG00000038500 | Prr3 | proline-rich polypeptide 3 | 5_prime_UTR_variant | 25 | chr17 | 35.97254 | 35.98024 | 4.346149 | 1.0000000 |
| 75210 | ENSMUSG00000038500 | Prr3 | proline-rich polypeptide 3 | upstream_gene_variant | 24 | chr17 | 35.97254 | 35.98024 | 4.346149 | 1.0000000 |
| 75210 | ENSMUSG00000038500 | Prr3 | proline-rich polypeptide 3 | downstream_gene_variant | 17 | chr17 | 35.97254 | 35.98024 | 4.346149 | 1.0000000 |
| 76416 | ENSMUSG00000036214 | Znrd1as | zinc ribbon domain containing 1, antisense | non_coding_transcript_variant | 3 | chr17 | 36.95859 | 36.96563 | 3.956803 | 1.0000000 |
| 76416 | ENSMUSG00000036214 | Znrd1as | zinc ribbon domain containing 1, antisense | 5_prime_UTR_variant | 2 | chr17 | 36.95859 | 36.96563 | 3.956803 | 1.0000000 |
| 76416 | ENSMUSG00000036214 | Znrd1as | zinc ribbon domain containing 1, antisense | missense_variant | 6 | chr17 | 36.95859 | 36.96563 | 3.956803 | 1.0000000 |
| 76416 | ENSMUSG00000036214 | Znrd1as | zinc ribbon domain containing 1, antisense | downstream_gene_variant | 6 | chr17 | 36.95859 | 36.96563 | 3.956803 | 1.0000000 |
| 76416 | ENSMUSG00000036214 | Znrd1as | zinc ribbon domain containing 1, antisense | intron_variant | 3 | chr17 | 36.95859 | 36.96563 | 3.956803 | 1.0000000 |
| 76416 | ENSMUSG00000036214 | Znrd1as | zinc ribbon domain containing 1, antisense | upstream_gene_variant | 11 | chr17 | 36.95859 | 36.96563 | 3.956803 | 1.0000000 |
| 76448 | ENSMUSG00000034595 | Ppp1r18 | protein phosphatase 1, regulatory subunit 18 | downstream_gene_variant | 2 | chr17 | 35.86559 | 35.87560 | 6.320948 | 0.0005781 |
| 76448 | ENSMUSG00000034595 | Ppp1r18 | protein phosphatase 1, regulatory subunit 18 | upstream_gene_variant | 9 | chr17 | 35.86559 | 35.87560 | 6.320948 | 0.0005781 |
| 76448 | ENSMUSG00000034595 | Ppp1r18 | protein phosphatase 1, regulatory subunit 18 | splice_region_variant | 2 | chr17 | 35.86559 | 35.87560 | 6.320948 | 0.0005781 |
| 76448 | ENSMUSG00000034595 | Ppp1r18 | protein phosphatase 1, regulatory subunit 18 | upstream_gene_variant | 18 | chr17 | 35.86559 | 35.87560 | 6.320948 | 0.0005781 |
| 76448 | ENSMUSG00000034595 | Ppp1r18 | protein phosphatase 1, regulatory subunit 18 | missense_variant | 8 | chr17 | 35.86559 | 35.87560 | 6.320948 | 0.0005781 |
| 76448 | ENSMUSG00000034595 | Ppp1r18 | protein phosphatase 1, regulatory subunit 18 | downstream_gene_variant | 4 | chr17 | 35.86559 | 35.87560 | 6.320948 | 0.0005781 |
| 76448 | ENSMUSG00000034595 | Ppp1r18 | protein phosphatase 1, regulatory subunit 18 | 5_prime_UTR_variant | 10 | chr17 | 35.86559 | 35.87560 | 6.320948 | 0.0005781 |
| 76448 | ENSMUSG00000034595 | Ppp1r18 | protein phosphatase 1, regulatory subunit 18 | synonymous_variant | 10 | chr17 | 35.86559 | 35.87560 | 6.320948 | 0.0005781 |
| 76448 | ENSMUSG00000034595 | Ppp1r18 | protein phosphatase 1, regulatory subunit 18 | intron_variant | 13 | chr17 | 35.86559 | 35.87560 | 6.320948 | 0.0005781 |
| 76448 | ENSMUSG00000034595 | Ppp1r18 | protein phosphatase 1, regulatory subunit 18 | 3_prime_UTR_variant | 33 | chr17 | 35.86559 | 35.87560 | 6.320948 | 0.0005781 |
| 76497 | ENSMUSG00000036398 | Ppp1r11 | protein phosphatase 1, regulatory inhibitor subunit 11 | missense_variant | 3 | chr17 | 36.94836 | 36.95174 | 6.016991 | 0.0001825 |
| 76497 | ENSMUSG00000036398 | Ppp1r11 | protein phosphatase 1, regulatory inhibitor subunit 11 | 3_prime_UTR_variant | 3 | chr17 | 36.94836 | 36.95174 | 6.016991 | 0.0001825 |
| 76497 | ENSMUSG00000036398 | Ppp1r11 | protein phosphatase 1, regulatory inhibitor subunit 11 | 5_prime_UTR_variant | 4 | chr17 | 36.94836 | 36.95174 | 6.016991 | 0.0001825 |
| 76497 | ENSMUSG00000036398 | Ppp1r11 | protein phosphatase 1, regulatory inhibitor subunit 11 | upstream_gene_variant | 7 | chr17 | 36.94836 | 36.95174 | 6.016991 | 0.0001825 |
| 76497 | ENSMUSG00000036398 | Ppp1r11 | protein phosphatase 1, regulatory inhibitor subunit 11 | intron_variant | 4 | chr17 | 36.94836 | 36.95174 | 6.016991 | 0.0001825 |
| 76497 | ENSMUSG00000036398 | Ppp1r11 | protein phosphatase 1, regulatory inhibitor subunit 11 | downstream_gene_variant | 2 | chr17 | 36.94836 | 36.95174 | 6.016991 | 0.0001825 |
| 76497 | ENSMUSG00000036398 | Ppp1r11 | protein phosphatase 1, regulatory inhibitor subunit 11 | upstream_gene_variant | 4 | chr17 | 36.94836 | 36.95174 | 6.016991 | 0.0001825 |
| 76497 | ENSMUSG00000036398 | Ppp1r11 | protein phosphatase 1, regulatory inhibitor subunit 11 | downstream_gene_variant | 3 | chr17 | 36.94836 | 36.95174 | 6.016991 | 0.0001825 |
| 76797 | ENSMUSG00000064308 | 2410137M14Rik | RIKEN cDNA 2410137M14 gene | 3_prime_UTR_variant | 8 | chr17 | 36.97770 | 36.98124 | 2.771169 | 0.3931872 |
| 76797 | ENSMUSG00000064308 | 2410137M14Rik | RIKEN cDNA 2410137M14 gene | missense_variant | 7 | chr17 | 36.97770 | 36.98124 | 2.771169 | 0.3931872 |
| 76797 | ENSMUSG00000064308 | 2410137M14Rik | RIKEN cDNA 2410137M14 gene | downstream_gene_variant | 2 | chr17 | 36.97770 | 36.98124 | 2.771169 | 0.3931872 |
| 76797 | ENSMUSG00000064308 | 2410137M14Rik | RIKEN cDNA 2410137M14 gene | upstream_gene_variant | 11 | chr17 | 36.97770 | 36.98124 | 2.771169 | 0.3931872 |
| 76797 | ENSMUSG00000064308 | 2410137M14Rik | RIKEN cDNA 2410137M14 gene | synonymous_variant | 3 | chr17 | 36.97770 | 36.98124 | 2.771169 | 0.3931872 |
| 76797 | ENSMUSG00000064308 | 2410137M14Rik | RIKEN cDNA 2410137M14 gene | intron_variant | 1 | chr17 | 36.97770 | 36.98124 | 2.771169 | 0.3931872 |
| 76797 | ENSMUSG00000064308 | 2410137M14Rik | RIKEN cDNA 2410137M14 gene | splice_region_variant | 1 | chr17 | 36.97770 | 36.98124 | 2.771169 | 0.3931872 |
| 79263 | ENSMUSG00000045409 | Trim39 | tripartite motif-containing 39 | downstream_gene_variant | 20 | chr17 | 36.25887 | 36.27225 | 5.073831 | 0.0384167 |
| 79263 | ENSMUSG00000045409 | Trim39 | tripartite motif-containing 39 | missense_variant | 3 | chr17 | 36.25887 | 36.27225 | 5.073831 | 0.0384167 |
| 79263 | ENSMUSG00000045409 | Trim39 | tripartite motif-containing 39 | splice_region_variant | 1 | chr17 | 36.25887 | 36.27225 | 5.073831 | 0.0384167 |
| 79263 | ENSMUSG00000045409 | Trim39 | tripartite motif-containing 39 | downstream_gene_variant | 32 | chr17 | 36.25887 | 36.27225 | 5.073831 | 0.0384167 |
| 79263 | ENSMUSG00000045409 | Trim39 | tripartite motif-containing 39 | 5_prime_UTR_variant | 20 | chr17 | 36.25887 | 36.27225 | 5.073831 | 0.0384167 |
| 79263 | ENSMUSG00000045409 | Trim39 | tripartite motif-containing 39 | synonymous_variant | 14 | chr17 | 36.25887 | 36.27225 | 5.073831 | 0.0384167 |
| 79263 | ENSMUSG00000045409 | Trim39 | tripartite motif-containing 39 | non_coding_transcript_variant | 74 | chr17 | 36.25887 | 36.27225 | 5.073831 | 0.0384167 |
| 79263 | ENSMUSG00000045409 | Trim39 | tripartite motif-containing 39 | upstream_gene_variant | 53 | chr17 | 36.25887 | 36.27225 | 5.073831 | 0.0384167 |
| 79263 | ENSMUSG00000045409 | Trim39 | tripartite motif-containing 39 | intron_variant | 53 | chr17 | 36.25887 | 36.27225 | 5.073831 | 0.0384167 |
| 79263 | ENSMUSG00000045409 | Trim39 | tripartite motif-containing 39 | NMD_transcript_variant | 53 | chr17 | 36.25887 | 36.27225 | 5.073831 | 0.0384167 |
| 79263 | ENSMUSG00000045409 | Trim39 | tripartite motif-containing 39 | 3_prime_UTR_variant | 39 | chr17 | 36.25887 | 36.27225 | 5.073831 | 0.0384167 |
| 79263 | ENSMUSG00000045409 | Trim39 | tripartite motif-containing 39 | non_coding_transcript_exon_variant | 73 | chr17 | 36.25887 | 36.27225 | 5.073831 | 0.0384167 |
| 83815 | ENSMUSG00000023919 | Cenpq | centromere protein Q | upstream_gene_variant | 1 | chr17 | 40.92305 | 40.93505 | 3.851138 | 0.8183884 |
| 83815 | ENSMUSG00000023919 | Cenpq | centromere protein Q | 5_prime_UTR_variant | 2 | chr17 | 40.92305 | 40.93505 | 3.851138 | 0.8183884 |
| 83815 | ENSMUSG00000023919 | Cenpq | centromere protein Q | 5_prime_UTR_variant | 9 | chr17 | 40.92305 | 40.93505 | 3.851138 | 0.8183884 |
| 83815 | ENSMUSG00000023919 | Cenpq | centromere protein Q | non_coding_transcript_exon_variant | 2 | chr17 | 40.92305 | 40.93505 | 3.851138 | 0.8183884 |
| 83815 | ENSMUSG00000023919 | Cenpq | centromere protein Q | non_coding_transcript_variant | 2 | chr17 | 40.92305 | 40.93505 | 3.851138 | 0.8183884 |
| 83815 | ENSMUSG00000023919 | Cenpq | centromere protein Q | missense_variant | 2 | chr17 | 40.92305 | 40.93505 | 3.851138 | 0.8183884 |
| 83815 | ENSMUSG00000023919 | Cenpq | centromere protein Q | upstream_gene_variant | 2 | chr17 | 40.92305 | 40.93505 | 3.851138 | 0.8183884 |
| 83815 | ENSMUSG00000023919 | Cenpq | centromere protein Q | intron_variant | 2 | chr17 | 40.92305 | 40.93505 | 3.851138 | 0.8183884 |
| 83815 | ENSMUSG00000023919 | Cenpq | centromere protein Q | downstream_gene_variant | 1 | chr17 | 40.92305 | 40.93505 | 3.851138 | 0.8183884 |
| 83815 | ENSMUSG00000023919 | Cenpq | centromere protein Q | 3_prime_UTR_variant | 1 | chr17 | 40.92305 | 40.93505 | 3.851138 | 0.8183884 |
## R version 4.0.5 (2021-03-31)
## Platform: x86_64-pc-linux-gnu (64-bit)
## Running under: Ubuntu 20.04.2 LTS
##
## Matrix products: default
## BLAS: /usr/lib/x86_64-linux-gnu/blas/libblas.so.3.9.0
## LAPACK: /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3.9.0
##
## locale:
## [1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C
## [3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8
## [5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8
## [7] LC_PAPER=en_US.UTF-8 LC_NAME=C
## [9] LC_ADDRESS=C LC_TELEPHONE=C
## [11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C
##
## attached base packages:
## [1] parallel stats4 stats graphics grDevices utils datasets
## [8] methods base
##
## other attached packages:
## [1] qtl2_0.24
## [2] Mus.musculus_1.3.1
## [3] TxDb.Mmusculus.UCSC.mm10.knownGene_3.10.0
## [4] org.Mm.eg.db_3.12.0
## [5] GO.db_3.12.1
## [6] OrganismDbi_1.32.0
## [7] GenomicFeatures_1.42.3
## [8] GenomicRanges_1.42.0
## [9] GenomeInfoDb_1.26.7
## [10] AnnotationDbi_1.52.0
## [11] IRanges_2.24.1
## [12] S4Vectors_0.28.1
## [13] Biobase_2.50.0
## [14] BiocGenerics_0.36.1
## [15] survival_3.2-11
## [16] knitr_1.32
##
## loaded via a namespace (and not attached):
## [1] MatrixGenerics_1.2.1 httr_1.4.2
## [3] sass_0.3.1 bit64_4.0.5
## [5] jsonlite_1.7.2 splines_4.0.5
## [7] bslib_0.2.4 assertthat_0.2.1
## [9] askpass_1.1 highr_0.9
## [11] BiocManager_1.30.12 BiocFileCache_1.14.0
## [13] RBGL_1.66.0 blob_1.2.1
## [15] GenomeInfoDbData_1.2.4 Rsamtools_2.6.0
## [17] yaml_2.2.1 progress_1.2.2
## [19] pillar_1.6.0 RSQLite_2.2.6
## [21] lattice_0.20-44 glue_1.4.2
## [23] digest_0.6.27 XVector_0.30.0
## [25] htmltools_0.5.1.1 Matrix_1.3-2
## [27] XML_3.99-0.6 pkgconfig_2.0.3
## [29] biomaRt_2.46.3 zlibbioc_1.36.0
## [31] purrr_0.3.4 BiocParallel_1.24.1
## [33] tibble_3.1.1 openssl_1.4.3
## [35] generics_0.1.0 ellipsis_0.3.1
## [37] cachem_1.0.4 SummarizedExperiment_1.20.0
## [39] magrittr_2.0.1 crayon_1.4.1
## [41] memoise_2.0.0 evaluate_0.14
## [43] fansi_0.4.2 xml2_1.3.2
## [45] graph_1.68.0 data.table_1.14.0
## [47] tools_4.0.5 prettyunits_1.1.1
## [49] hms_1.0.0 lifecycle_1.0.0
## [51] matrixStats_0.58.0 stringr_1.4.0
## [53] DelayedArray_0.16.3 Biostrings_2.58.0
## [55] compiler_4.0.5 jquerylib_0.1.3
## [57] rlang_0.4.10 grid_4.0.5
## [59] RCurl_1.98-1.3 rappdirs_0.3.3
## [61] bitops_1.0-6 rmarkdown_2.7
## [63] DBI_1.1.1 curl_4.3
## [65] R6_2.5.0 GenomicAlignments_1.26.0
## [67] dplyr_1.0.5 rtracklayer_1.50.0
## [69] fastmap_1.1.0 bit_4.0.4
## [71] utf8_1.2.1 stringi_1.5.3
## [73] Rcpp_1.0.6 vctrs_0.3.7
## [75] dbplyr_2.1.1 tidyselect_1.1.0
## [77] xfun_0.22